A citation-based method for searching scientific literature

Erik W Martin, Alex S Holehouse, Ivan Peran, Mina Farag, J Jeremias Incicco, Anne Bremer, Christy R Grace, Andrea Soranno, Rohit V Pappu, Tanja Mittag. Science 2020
Times Cited: 173







List of co-cited articles
1139 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A Molecular Grammar Governing the Driving Forces for Phase Separation of Prion-like RNA Binding Proteins.
Jie Wang, Jeong-Mo Choi, Alex S Holehouse, Hyun O Lee, Xiaojie Zhang, Marcus Jahnel, Shovamayee Maharana, Régis Lemaitre, Andrei Pozniakovsky, David Drechsel,[...]. Cell 2018
522
60

Biomolecular condensates: organizers of cellular biochemistry.
Salman F Banani, Hyun O Lee, Anthony A Hyman, Michael K Rosen. Nat Rev Mol Cell Biol 2017
56

Liquid phase condensation in cell physiology and disease.
Yongdae Shin, Clifford P Brangwynne. Science 2017
49

Phase transitions in the assembly of multivalent signalling proteins.
Pilong Li, Sudeep Banjade, Hui-Chun Cheng, Soyeon Kim, Baoyu Chen, Liang Guo, Marc Llaguno, Javoris V Hollingsworth, David S King, Salman F Banani,[...]. Nature 2012
48

Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles.
Timothy J Nott, Evangelia Petsalaki, Patrick Farber, Dylan Jervis, Eden Fussner, Anne Plochowietz, Timothy D Craggs, David P Bazett-Jones, Tony Pawson, Julie D Forman-Kay,[...]. Mol Cell 2015
732
45

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.
Avinash Patel, Hyun O Lee, Louise Jawerth, Shovamayee Maharana, Marcus Jahnel, Marco Y Hein, Stoyno Stoynov, Julia Mahamid, Shambaditya Saha, Titus M Franzmann,[...]. Cell 2015
44

Phase separation by low complexity domains promotes stress granule assembly and drives pathological fibrillization.
Amandine Molliex, Jamshid Temirov, Jihun Lee, Maura Coughlin, Anderson P Kanagaraj, Hong Joo Kim, Tanja Mittag, J Paul Taylor. Cell 2015
37

Protein Phase Separation: A New Phase in Cell Biology.
Steven Boeynaems, Simon Alberti, Nicolas L Fawzi, Tanja Mittag, Magdalini Polymenidou, Frederic Rousseau, Joost Schymkowitz, James Shorter, Benjamin Wolozin, Ludo Van Den Bosch,[...]. Trends Cell Biol 2018
651
36



LASSI: A lattice model for simulating phase transitions of multivalent proteins.
Jeong-Mo Choi, Furqan Dar, Rohit V Pappu. PLoS Comput Biol 2019
92
32

Sequence determinants of protein phase behavior from a coarse-grained model.
Gregory L Dignon, Wenwei Zheng, Young C Kim, Robert B Best, Jeetain Mittal. PLoS Comput Biol 2018
128
30

Stress-Triggered Phase Separation Is an Adaptive, Evolutionarily Tuned Response.
Joshua A Riback, Christopher D Katanski, Jamie L Kear-Scott, Evgeny V Pilipenko, Alexandra E Rojek, Tobin R Sosnick, D Allan Drummond. Cell 2017
319
29

Molecular interactions underlying liquid-liquid phase separation of the FUS low-complexity domain.
Anastasia C Murthy, Gregory L Dignon, Yelena Kan, Gül H Zerze, Sapun H Parekh, Jeetain Mittal, Nicolas L Fawzi. Nat Struct Mol Biol 2019
147
29

Residue-by-Residue View of In Vitro FUS Granules that Bind the C-Terminal Domain of RNA Polymerase II.
Kathleen A Burke, Abigail M Janke, Christy L Rhine, Nicolas L Fawzi. Mol Cell 2015
397
29

Compositional Control of Phase-Separated Cellular Bodies.
Salman F Banani, Allyson M Rice, William B Peeples, Yuan Lin, Saumya Jain, Roy Parker, Michael K Rosen. Cell 2016
422
29

Physical Principles Underlying the Complex Biology of Intracellular Phase Transitions.
Jeong-Mo Choi, Alex S Holehouse, Rohit V Pappu. Annu Rev Biophys 2020
139
28

Liquid-liquid phase separation in biology.
Anthony A Hyman, Christoph A Weber, Frank Jülicher. Annu Rev Cell Dev Biol 2014
28

Germline P granules are liquid droplets that localize by controlled dissolution/condensation.
Clifford P Brangwynne, Christian R Eckmann, David S Courson, Agata Rybarska, Carsten Hoege, Jöbin Gharakhani, Frank Jülicher, Anthony A Hyman. Science 2009
28

Phosphorylation of the FUS low-complexity domain disrupts phase separation, aggregation, and toxicity.
Zachary Monahan, Veronica H Ryan, Abigail M Janke, Kathleen A Burke, Shannon N Rhoads, Gül H Zerze, Robert O'Meally, Gregory L Dignon, Alexander E Conicella, Wenwei Zheng,[...]. EMBO J 2017
289
26

Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels.
Masato Kato, Tina W Han, Shanhai Xie, Kevin Shi, Xinlin Du, Leeju C Wu, Hamid Mirzaei, Elizabeth J Goldsmith, Jamie Longgood, Jimin Pei,[...]. Cell 2012
26

Phase separation of signaling molecules promotes T cell receptor signal transduction.
Xiaolei Su, Jonathon A Ditlev, Enfu Hui, Wenmin Xing, Sudeep Banjade, Julia Okrut, David S King, Jack Taunton, Michael K Rosen, Ronald D Vale. Science 2016
428
25

Competing Protein-RNA Interaction Networks Control Multiphase Intracellular Organization.
David W Sanders, Nancy Kedersha, Daniel S W Lee, Amy R Strom, Victoria Drake, Joshua A Riback, Dan Bracha, Jorine M Eeftens, Allana Iwanicki, Alicia Wang,[...]. Cell 2020
153
25

Phase separation of a yeast prion protein promotes cellular fitness.
Titus M Franzmann, Marcus Jahnel, Andrei Pozniakovsky, Julia Mahamid, Alex S Holehouse, Elisabeth Nüske, Doris Richter, Wolfgang Baumeister, Stephan W Grill, Rohit V Pappu,[...]. Science 2018
263
24

Coexisting Liquid Phases Underlie Nucleolar Subcompartments.
Marina Feric, Nilesh Vaidya, Tyler S Harmon, Diana M Mitrea, Lian Zhu, Tiffany M Richardson, Richard W Kriwacki, Rohit V Pappu, Clifford P Brangwynne. Cell 2016
690
24

Pi-Pi contacts are an overlooked protein feature relevant to phase separation.
Robert McCoy Vernon, Paul Andrew Chong, Brian Tsang, Tae Hun Kim, Alaji Bah, Patrick Farber, Hong Lin, Julie Deborah Forman-Kay. Elife 2018
230
24

Coactivator condensation at super-enhancers links phase separation and gene control.
Benjamin R Sabari, Alessandra Dall'Agnese, Ann Boija, Isaac A Klein, Eliot L Coffey, Krishna Shrinivas, Brian J Abraham, Nancy M Hannett, Alicia V Zamudio, John C Manteiga,[...]. Science 2018
729
23

RNA-Induced Conformational Switching and Clustering of G3BP Drive Stress Granule Assembly by Condensation.
Jordina Guillén-Boixet, Andrii Kopach, Alex S Holehouse, Sina Wittmann, Marcus Jahnel, Raimund Schlüßler, Kyoohyun Kim, Irmela R E A Trussina, Jie Wang, Daniel Mateju,[...]. Cell 2020
165
23

Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins.
Yuan Lin, David S W Protter, Michael K Rosen, Roy Parker. Mol Cell 2015
745
22

Transcription Factors Activate Genes through the Phase-Separation Capacity of Their Activation Domains.
Ann Boija, Isaac A Klein, Benjamin R Sabari, Alessandra Dall'Agnese, Eliot L Coffey, Alicia V Zamudio, Charles H Li, Krishna Shrinivas, John C Manteiga, Nancy M Hannett,[...]. Cell 2018
472
22

Composition-dependent thermodynamics of intracellular phase separation.
Joshua A Riback, Lian Zhu, Mylene C Ferrolino, Michele Tolbert, Diana M Mitrea, David W Sanders, Ming-Tzo Wei, Richard W Kriwacki, Clifford P Brangwynne. Nature 2020
111
21

Structural and hydrodynamic properties of an intrinsically disordered region of a germ cell-specific protein on phase separation.
Jacob P Brady, Patrick J Farber, Ashok Sekhar, Yi-Hsuan Lin, Rui Huang, Alaji Bah, Timothy J Nott, Hue Sun Chan, Andrew J Baldwin, Julie D Forman-Kay,[...]. Proc Natl Acad Sci U S A 2017
163
21

Sequence Determinants of Intracellular Phase Separation by Complex Coacervation of a Disordered Protein.
Chi W Pak, Martyna Kosno, Alex S Holehouse, Shae B Padrick, Anuradha Mittal, Rustam Ali, Ali A Yunus, David R Liu, Rohit V Pappu, Michael K Rosen. Mol Cell 2016
300
20

Relation between single-molecule properties and phase behavior of intrinsically disordered proteins.
Gregory L Dignon, Wenwei Zheng, Robert B Best, Young C Kim, Jeetain Mittal. Proc Natl Acad Sci U S A 2018
101
19

Biomolecular Phase Separation: From Molecular Driving Forces to Macroscopic Properties.
Gregory L Dignon, Robert B Best, Jeetain Mittal. Annu Rev Phys Chem 2020
65
29

Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin.
Adam G Larson, Daniel Elnatan, Madeline M Keenen, Michael J Trnka, Jonathan B Johnston, Alma L Burlingame, David A Agard, Sy Redding, Geeta J Narlikar. Nature 2017
679
19

Phase separation drives heterochromatin domain formation.
Amy R Strom, Alexander V Emelyanov, Mustafa Mir, Dmitry V Fyodorov, Xavier Darzacq, Gary H Karpen. Nature 2017
729
19

The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics.
Shana Elbaum-Garfinkle, Younghoon Kim, Krzysztof Szczepaniak, Carlos Chih-Hsiung Chen, Christian R Eckmann, Sua Myong, Clifford P Brangwynne. Proc Natl Acad Sci U S A 2015
501
18

G3BP1 Is a Tunable Switch that Triggers Phase Separation to Assemble Stress Granules.
Peiguo Yang, Cécile Mathieu, Regina-Maria Kolaitis, Peipei Zhang, James Messing, Ugur Yurtsever, Zemin Yang, Jinjun Wu, Yuxin Li, Qingfei Pan,[...]. Cell 2020
170
18


Spontaneous driving forces give rise to protein-RNA condensates with coexisting phases and complex material properties.
Steven Boeynaems, Alex S Holehouse, Venera Weinhardt, Denes Kovacs, Joris Van Lindt, Carolyn Larabell, Ludo Van Den Bosch, Rhiju Das, Peter S Tompa, Rohit V Pappu,[...]. Proc Natl Acad Sci U S A 2019
127
17

FUS Phase Separation Is Modulated by a Molecular Chaperone and Methylation of Arginine Cation-π Interactions.
Seema Qamar, GuoZhen Wang, Suzanne J Randle, Francesco Simone Ruggeri, Juan A Varela, Julie Qiaojin Lin, Emma C Phillips, Akinori Miyashita, Declan Williams, Florian Ströhl,[...]. Cell 2018
309
17


TDP-43 α-helical structure tunes liquid-liquid phase separation and function.
Alexander E Conicella, Gregory L Dignon, Gül H Zerze, Hermann Broder Schmidt, Alexandra M D'Ordine, Young C Kim, Rajat Rohatgi, Yuna M Ayala, Jeetain Mittal, Nicolas L Fawzi. Proc Natl Acad Sci U S A 2020
77
22

Self-interaction of NPM1 modulates multiple mechanisms of liquid-liquid phase separation.
Diana M Mitrea, Jaclyn A Cika, Christopher B Stanley, Amanda Nourse, Paulo L Onuchic, Priya R Banerjee, Aaron H Phillips, Cheon-Gil Park, Ashok A Deniz, Richard W Kriwacki. Nat Commun 2018
127
16

Atomic structures of low-complexity protein segments reveal kinked β sheets that assemble networks.
Michael P Hughes, Michael R Sawaya, David R Boyer, Lukasz Goldschmidt, Jose A Rodriguez, Duilio Cascio, Lisa Chong, Tamir Gonen, David S Eisenberg. Science 2018
169
16

Identifying sequence perturbations to an intrinsically disordered protein that determine its phase-separation behavior.
Benjamin S Schuster, Gregory L Dignon, Wai Shing Tang, Fleurie M Kelley, Aishwarya Kanchi Ranganath, Craig N Jahnke, Alison G Simpkins, Roshan Mammen Regy, Daniel A Hammer, Matthew C Good,[...]. Proc Natl Acad Sci U S A 2020
51
31

Mechanistic View of hnRNPA2 Low-Complexity Domain Structure, Interactions, and Phase Separation Altered by Mutation and Arginine Methylation.
Veronica H Ryan, Gregory L Dignon, Gül H Zerze, Charlene V Chabata, Rute Silva, Alexander E Conicella, Joshua Amaya, Kathleen A Burke, Jeetain Mittal, Nicolas L Fawzi. Mol Cell 2018
163
16

Partitioning of cancer therapeutics in nuclear condensates.
Isaac A Klein, Ann Boija, Lena K Afeyan, Susana Wilson Hawken, Mengyang Fan, Alessandra Dall'Agnese, Ozgur Oksuz, Jonathan E Henninger, Krishna Shrinivas, Benjamin R Sabari,[...]. Science 2020
75
21

Mediator and RNA polymerase II clusters associate in transcription-dependent condensates.
Won-Ki Cho, Jan-Hendrik Spille, Micca Hecht, Choongman Lee, Charles Li, Valentin Grube, Ibrahim I Cisse. Science 2018
440
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.