A citation-based method for searching scientific literature

Mayanglambam Dhruba Singh, Matthew Jensen, Micaela Lasser, Emily Huber, Tanzeen Yusuff, Lucilla Pizzo, Brian Lifschutz, Inshya Desai, Alexis Kubina, Sneha Yennawar, Sydney Kim, Janani Iyer, Diego E Rincon-Limas, Laura Anne Lowery, Santhosh Girirajan. PLoS Genet 2020
Times Cited: 8







List of co-cited articles
47 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Pervasive genetic interactions modulate neurodevelopmental defects of the autism-associated 16p11.2 deletion in Drosophila melanogaster.
Janani Iyer, Mayanglambam Dhruba Singh, Matthew Jensen, Payal Patel, Lucilla Pizzo, Emily Huber, Haley Koerselman, Alexis T Weiner, Paola Lepanto, Komal Vadodaria,[...]. Nat Commun 2018
19
50

Behavioral changes and growth deficits in a CRISPR engineered mouse model of the schizophrenia-associated 3q29 deletion.
Timothy P Rutkowski, Ryan H Purcell, Rebecca M Pollak, Stephanie M Grewenow, Georgette M Gafford, Tamika Malone, Uswa A Khan, Jason P Schroeder, Michael P Epstein, Gary J Bassell,[...]. Mol Psychiatry 2021
12
50


Human copy number variation and complex genetic disease.
Santhosh Girirajan, Catarina D Campbell, Evan E Eichler. Annu Rev Genet 2011
207
37

Drosophila models of pathogenic copy-number variant genes show global and non-neuronal defects during development.
Tanzeen Yusuff, Matthew Jensen, Sneha Yennawar, Lucilla Pizzo, Siddharth Karthikeyan, Dagny J Gould, Avik Sarker, Erika Gedvilaite, Yurika Matsui, Janani Iyer,[...]. PLoS Genet 2020
3
100

Oligogenic Effects of 16p11.2 Copy-Number Variation on Craniofacial Development.
Yuqi Qiu, Thomas Arbogast, Sandra Martin Lorenzo, Hongying Li, Shih C Tang, Ellen Richardson, Oanh Hong, Shawn Cho, Omar Shanta, Timothy Pang,[...]. Cell Rep 2019
12
37



Kctd13 deletion reduces synaptic transmission via increased RhoA.
Christine Ochoa Escamilla, Irina Filonova, Angela K Walker, Zhong X Xuan, Roopashri Holehonnur, Felipe Espinosa, Shunan Liu, Summer B Thyme, Isabel A López-García, Dorian B Mendoza,[...]. Nature 2017
49
25

Multiple signaling pathways and a selector protein sequentially regulate Drosophila wing development.
Shian-Jang Yan, Yi Gu, Willis X Li, Robert J Fleming. Development 2004
29
25



De novo copy number variants identify new genes and loci in isolated sporadic tetralogy of Fallot.
Steven C Greenway, Alexandre C Pereira, Jennifer C Lin, Steven R DePalma, Samuel J Israel, Sonia M Mesquita, Emel Ergul, Jessie H Conta, Joshua M Korn, Steven A McCarroll,[...]. Nat Genet 2009
296
25

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
25

KCTD13 is a major driver of mirrored neuroanatomical phenotypes of the 16p11.2 copy number variant.
Christelle Golzio, Jason Willer, Michael E Talkowski, Edwin C Oh, Yu Taniguchi, Sébastien Jacquemont, Alexandre Reymond, Mei Sun, Akira Sawa, James F Gusella,[...]. Nature 2012
235
25

Cytoscape: a software environment for integrated models of biomolecular interaction networks.
Paul Shannon, Andrew Markiel, Owen Ozier, Nitin S Baliga, Jonathan T Wang, Daniel Ramage, Nada Amin, Benno Schwikowski, Trey Ideker. Genome Res 2003
25

Binding properties and dynamic localization of an alternative isoform of the cap-binding complex subunit CBP20.
Marta Pabis, Noa Neufeld, Yaron Shav-Tal, Karla M Neugebauer. Nucleus 2010
13
25

Copy number variation in human health, disease, and evolution.
Feng Zhang, Wenli Gu, Matthew E Hurles, James R Lupski. Annu Rev Genomics Hum Genet 2009
693
25

A systematic analysis of human disease-associated gene sequences in Drosophila melanogaster.
L T Reiter, L Potocki, S Chien, M Gribskov, E Bier. Genome Res 2001
462
25

Understanding multicellular function and disease with human tissue-specific networks.
Casey S Greene, Arjun Krishnan, Aaron K Wong, Emanuela Ricciotti, Rene A Zelaya, Daniel S Himmelstein, Ran Zhang, Boris M Hartmann, Elena Zaslavsky, Stuart C Sealfon,[...]. Nat Genet 2015
362
25

Using FlyAtlas to identify better Drosophila melanogaster models of human disease.
Venkateswara R Chintapalli, Jing Wang, Julian A T Dow. Nat Genet 2007
25

GluR1 controls dendrite growth through its binding partner, SAP97.
Weiguo Zhou, Lei Zhang, Xiong Guoxiang, Jelena Mojsilovic-Petrovic, Kogo Takamaya, Rita Sattler, Richard Huganir, Robert Kalb. J Neurosci 2008
45
25

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources.
Sebastian Köhler, Leigh Carmody, Nicole Vasilevsky, Julius O B Jacobsen, Daniel Danis, Jean-Philippe Gourdine, Michael Gargano, Nomi L Harris, Nicolas Matentzoglu, Julie A McMurry,[...]. Nucleic Acids Res 2019
226
25

Altered TAOK2 activity causes autism-related neurodevelopmental and cognitive abnormalities through RhoA signaling.
Melanie Richter, Nadeem Murtaza, Robin Scharrenberg, Sean H White, Ole Johanns, Susan Walker, Ryan K C Yuen, Birgit Schwanke, Bianca Bedürftig, Melad Henis,[...]. Mol Psychiatry 2019
46
25

Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.
Brian J O'Roak, Laura Vives, Santhosh Girirajan, Emre Karakoc, Niklas Krumm, Bradley P Coe, Roie Levy, Arthur Ko, Choli Lee, Joshua D Smith,[...]. Nature 2012
25


Quantitative Assessment of Eye Phenotypes for Functional Genetic Studies Using Drosophila melanogaster.
Janani Iyer, Qingyu Wang, Thanh Le, Lucilla Pizzo, Sebastian Grönke, Surendra S Ambegaokar, Yuzuru Imai, Ashutosh Srivastava, Beatriz Llamusí Troisí, Graeme Mardon,[...]. G3 (Bethesda) 2016
22
25


An integrative approach to ortholog prediction for disease-focused and other functional studies.
Yanhui Hu, Ian Flockhart, Arunachalam Vinayagam, Clemens Bergwitz, Bonnie Berger, Norbert Perrimon, Stephanie E Mohr. BMC Bioinformatics 2011
280
25


Phenotypic heterogeneity of genomic disorders and rare copy-number variants.
Santhosh Girirajan, Jill A Rosenfeld, Bradley P Coe, Sumit Parikh, Neil Friedman, Amy Goldstein, Robyn A Filipink, Juliann S McConnell, Brad Angle, Wendy S Meschino,[...]. N Engl J Med 2012
353
25

Over-expression of DSCAM and COL6A2 cooperatively generates congenital heart defects.
Tamar R Grossman, Amir Gamliel, Robert J Wessells, Ouarda Taghli-Lamallem, Kristen Jepsen, Karen Ocorr, Julie R Korenberg, Kirk L Peterson, Michael G Rosenfeld, Rolf Bodmer,[...]. PLoS Genet 2011
47
25

Association between microdeletion and microduplication at 16p11.2 and autism.
Lauren A Weiss, Yiping Shen, Joshua M Korn, Dan E Arking, David T Miller, Ragnheidur Fossdal, Evald Saemundsen, Hreinn Stefansson, Manuel A R Ferreira, Todd Green,[...]. N Engl J Med 2008
25

PAK2 Haploinsufficiency Results in Synaptic Cytoskeleton Impairment and Autism-Related Behavior.
Yan Wang, Cheng Zeng, Jinchen Li, Zikai Zhou, Xingda Ju, Shuting Xia, Yuanyuan Li, An Liu, Huajing Teng, Kun Zhang,[...]. Cell Rep 2018
24
25

Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder.
Arjun Krishnan, Ran Zhang, Victoria Yao, Chandra L Theesfeld, Aaron K Wong, Alicja Tadych, Natalia Volfovsky, Alan Packer, Alex Lash, Olga G Troyanskaya. Nat Neurosci 2016
146
25

The 16p11.2 homologs fam57ba and doc2a generate certain brain and body phenotypes.
Jasmine M McCammon, Alicia Blaker-Lee, Xiao Chen, Hazel Sive. Hum Mol Genet 2017
12
25

Systems Analysis of the 22q11.2 Microdeletion Syndrome Converges on a Mitochondrial Interactome Necessary for Synapse Function and Behavior.
Avanti Gokhale, Cortnie Hartwig, Amanda A H Freeman, Julia L Bassell, Stephanie A Zlatic, Christie Sapp Savas, Trishna Vadlamudi, Farida Abudulai, Tyler T Pham, Amanda Crocker,[...]. J Neurosci 2019
17
25

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
25

CNVs conferring risk of autism or schizophrenia affect cognition in controls.
Hreinn Stefansson, Andreas Meyer-Lindenberg, Stacy Steinberg, Brynja Magnusdottir, Katrin Morgen, Sunna Arnarsdottir, Gyda Bjornsdottir, G Bragi Walters, Gudrun A Jonsdottir, Orla M Doyle,[...]. Nature 2014
371
25

HTSeq--a Python framework to work with high-throughput sequencing data.
Simon Anders, Paul Theodor Pyl, Wolfgang Huber. Bioinformatics 2015
25

Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
25


Neuropsychiatric phenotypes and a distinct constellation of ASD features in 3q29 deletion syndrome: results from the 3q29 registry.
Rebecca M Pollak, Melissa M Murphy, Michael P Epstein, Michael E Zwick, Cheryl Klaiman, Celine A Saulnier, Jennifer G Mulle. Mol Autism 2019
10
25

Novel features of 3q29 deletion syndrome: Results from the 3q29 registry.
Megan R Glassford, Jill A Rosenfeld, Alexa A Freedman, Michael E Zwick, Jennifer G Mulle. Am J Med Genet A 2016
39
25

Microdeletions of 3q29 confer high risk for schizophrenia.
Jennifer Gladys Mulle, Anne F Dodd, John A McGrath, Paula S Wolyniec, Adele A Mitchell, Amol C Shetty, Nara L Sobreira, David Valle, M Katharine Rudd, Glen Satten,[...]. Am J Hum Genet 2010
158
25

Deep phenotyping in 3q29 deletion syndrome: recommendations for clinical care.
Rossana Sanchez Russo, Michael J Gambello, Melissa M Murphy, Katrina Aberizk, Emily Black, T Lindsey Burrell, Grace Carlock, Joseph F Cubells, Michael T Epstein, Roberto Espana,[...]. Genet Med 2021
4
50

Insights into Autism Spectrum Disorder Genomic Architecture and Biology from 71 Risk Loci.
Stephan J Sanders, Xin He, A Jeremy Willsey, A Gulhan Ercan-Sencicek, Kaitlin E Samocha, A Ercument Cicek, Michael T Murtha, Vanessa H Bal, Somer L Bishop, Shan Dong,[...]. Neuron 2015
601
25


New approach for understanding genome variations in KEGG.
Minoru Kanehisa, Yoko Sato, Miho Furumichi, Kanae Morishima, Mao Tanabe. Nucleic Acids Res 2019
753
12

Human homolog of patched, a candidate gene for the basal cell nevus syndrome.
R L Johnson, A L Rothman, J Xie, L V Goodrich, J W Bare, J M Bonifas, A G Quinn, R M Myers, D R Cox, E H Epstein,[...]. Science 1996
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.