A citation-based method for searching scientific literature

Lauren L Prister, Shaohui Yin, Laty A Cahoon, H Steven Seifert. Biochemistry 2020
Times Cited: 4







List of co-cited articles
49 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Helix formation by guanylic acid.
M GELLERT, M N LIPSETT, D R DAVIES. Proc Natl Acad Sci U S A 1962
100

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
75

G-quadruplexes in pathogens: a common route to virulence control?
Lynne M Harris, Catherine J Merrick. PLoS Pathog 2015
72
75


Characterization of highly conserved G-quadruplex motifs as potential drug targets in Streptococcus pneumoniae.
Subodh Kumar Mishra, Neha Jain, Uma Shankar, Arpita Tawani, Tarun Kumar Sharma, Amit Kumar. Sci Rep 2019
20
75

Genome-wide analysis of regulatory G-quadruplexes affecting gene expression in human cytomegalovirus.
Subramaniyam Ravichandran, Young-Eui Kim, Varun Bansal, Ambarnil Ghosh, Jeonghwan Hur, Vinod Kumar Subramani, Subhra Pradhan, Myoung Kyu Lee, Kyeong Kyu Kim, Jin-Hyun Ahn. PLoS Pathog 2018
15
75

G-Quadruplexes: More Than Just a Kink in Microbial Genomes.
Nandhini Saranathan, Perumal Vivekanandan. Trends Microbiol 2019
47
75

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
75


Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
50

Following G-quartet formation by UV-spectroscopy.
J L Mergny, A T Phan, L Lacroix. FEBS Lett 1998
525
50

G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
820
50


A Double-Strand Break Does Not Promote Neisseria gonorrhoeae Pilin Antigenic Variation.
Lauren L Prister, Jing Xu, H Steven Seifert. J Bacteriol 2019
3
66


The G4 genome.
Nancy Maizels, Lucas T Gray. PLoS Genet 2013
316
50

Mapping and characterization of G-quadruplexes in Mycobacterium tuberculosis gene promoter regions.
Rosalba Perrone, Enrico Lavezzo, Erika Riello, Riccardo Manganelli, Giorgio Palù, Stefano Toppo, Roberta Provvedi, Sara N Richter. Sci Rep 2017
42
50

G-quadruplex forming structural motifs in the genome of Deinococcus radiodurans and their regulatory roles in promoter functions.
Swathi Kota, V Dhamodharan, P I Pradeepkumar, Hari S Misra. Appl Microbiol Biotechnol 2015
29
50

Control of bacterial nitrate assimilation by stabilization of G-quadruplex DNA.
Zoë A E Waller, Benjamin J Pinchbeck, Bhovina Seewoodharry Buguth, Timothy G Meadows, David J Richardson, Andrew J Gates. Chem Commun (Camb) 2016
22
50

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
670
50

Genome-wide analysis of a G-quadruplex-specific single-chain antibody that regulates gene expression.
Himesh Fernando, Sven Sewitz, Jeremy Darot, Simon Tavaré, Julian Leon Huppert, Shankar Balasubramanian. Nucleic Acids Res 2009
58
50

RNA G-Quadruplexes in Biology: Principles and Molecular Mechanisms.
Marta M Fay, Shawn M Lyons, Pavel Ivanov. J Mol Biol 2017
174
50


G-quadruplex structures are stable and detectable in human genomic DNA.
Enid Yi Ni Lam, Dario Beraldi, David Tannahill, Shankar Balasubramanian. Nat Commun 2013
280
50

RNA G-Quadruplex Structures Mediate Gene Regulation in Bacteria.
Xiaolong Shao, Weitong Zhang, Mubarak Ishaq Umar, Hei Yuen Wong, Zijing Seng, Yingpeng Xie, Yingchao Zhang, Liang Yang, Chun Kit Kwok, Xin Deng. mBio 2020
18
50


Genome-wide prediction of G4 DNA as regulatory motifs: role in Escherichia coli global regulation.
Pooja Rawal, Veera Bhadra Rao Kummarasetti, Jinoy Ravindran, Nirmal Kumar, Kangkan Halder, Rakesh Sharma, Mitali Mukerji, Swapan Kumar Das, Shantanu Chowdhury. Genome Res 2006
229
50

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
50

Characterization of G-Quadruplex Motifs in espB, espK, and cyp51 Genes of Mycobacterium tuberculosis as Potential Drug Targets.
Subodh Kumar Mishra, Uma Shankar, Neha Jain, Kriti Sikri, Jaya Sivaswami Tyagi, Tarun Kumar Sharma, Jean-Louis Mergny, Amit Kumar. Mol Ther Nucleic Acids 2019
15
50


Mycobacterium tuberculosis UvrD1 and UvrD2 helicases unwind G-quadruplex DNA.
Tias Saha, Kaustubh Shukla, Roshan Singh Thakur, Ambika Desingu, Ganesh Nagaraju. FEBS J 2019
9
50

Genome-wide study predicts promoter-G4 DNA motifs regulate selective functions in bacteria: radioresistance of D. radiodurans involves G4 DNA-mediated regulation.
Nicolas Beaume, Rajiv Pathak, Vinod Kumar Yadav, Swathi Kota, Hari S Misra, Hemant K Gautam, Shantanu Chowdhury. Nucleic Acids Res 2013
69
50

The Presence and Localization of G-Quadruplex Forming Sequences in the Domain of Bacteria.
Martin Bartas, Michaela Čutová, Václav Brázda, Patrik Kaura, Jiří Šťastný, Jan Kolomazník, Jan Coufal, Pratik Goswami, Jiří Červeň, Petr Pečinka. Molecules 2019
32
50

Guanine Quadruplex DNA Regulates Gamma Radiation Response of Genome Functions in the Radioresistant Bacterium Deinococcus radiodurans.
Shruti Mishra, Reema Chaudhary, Sudhir Singh, Swathi Kota, Hari S Misra. J Bacteriol 2019
8
50

G-quadruplexes regulate Epstein-Barr virus-encoded nuclear antigen 1 mRNA translation.
Pierre Murat, Jie Zhong, Lea Lekieffre, Nathan P Cowieson, Jennifer L Clancy, Thomas Preiss, Shankar Balasubramanian, Rajiv Khanna, Judy Tellam. Nat Chem Biol 2014
146
50

Genome wide distribution of G-quadruplexes and their impact on gene expression in malaria parasites.
Elodie Gazanion, Laurent Lacroix, Patrizia Alberti, Pratima Gurung, Sharon Wein, Mingpan Cheng, Jean-Louis Mergny, Ana Rita Gomes, Jose-Juan Lopez-Rubio. PLoS Genet 2020
8
50

Viral G-quadruplexes: New frontiers in virus pathogenesis and antiviral therapy.
Emanuela Ruggiero, Sara N Richter. Annu Rep Med Chem 2020
29
50

A highly conserved G-rich consensus sequence in hepatitis C virus core gene represents a new anti-hepatitis C target.
Shao-Ru Wang, Yuan-Qin Min, Jia-Qi Wang, Chao-Xing Liu, Bo-Shi Fu, Fan Wu, Ling-Yu Wu, Zhi-Xian Qiao, Yan-Yan Song, Guo-Hua Xu,[...]. Sci Adv 2016
63
50

The Herpes Simplex Virus-1 genome contains multiple clusters of repeated G-quadruplex: Implications for the antiviral activity of a G-quadruplex ligand.
Sara Artusi, Matteo Nadai, Rosalba Perrone, Maria Angela Biasolo, Giorgio Palù, Louis Flamand, Arianna Calistri, Sara N Richter. Antiviral Res 2015
77
50

Stabilization of Telomere G-Quadruplexes Interferes with Human Herpesvirus 6A Chromosomal Integration.
Shella Gilbert-Girard, Annie Gravel, Sara Artusi, Sara N Richter, Nina Wallaschek, Benedikt B Kaufer, Louis Flamand. J Virol 2017
21
50

G-quadruplexes and G-quadruplex ligands: targets and tools in antiviral therapy.
Emanuela Ruggiero, Sara N Richter. Nucleic Acids Res 2018
159
50

DNA G-quadruplex structures mold the DNA methylome.
Shi-Qing Mao, Avazeh T Ghanbarian, Jochen Spiegel, Sergio Martínez Cuesta, Dario Beraldi, Marco Di Antonio, Giovanni Marsico, Robert Hänsel-Hertsch, David Tannahill, Shankar Balasubramanian. Nat Struct Mol Biol 2018
77
50

A dynamic G-quadruplex region regulates the HIV-1 long terminal repeat promoter.
Rosalba Perrone, Matteo Nadai, Ilaria Frasson, Jerrod A Poe, Elena Butovskaya, Thomas E Smithgall, Manlio Palumbo, Giorgio Palù, Sara N Richter. J Med Chem 2013
108
50



G-quadruplex-interacting compounds alter latent DNA replication and episomal persistence of KSHV.
Advaitha Madireddy, Pravinkumar Purushothaman, Christopher P Loosbroock, Erle S Robertson, Carl L Schildkraut, Subhash C Verma. Nucleic Acids Res 2016
45
50

Novel cationic bis(acylhydrazones) as modulators of Epstein-Barr virus immune evasion acting through disruption of interaction between nucleolin and G-quadruplexes of EBNA1 mRNA.
Oksana Reznichenko, Alicia Quillévéré, Rodrigo Prado Martins, Nadège Loaëc, Hang Kang, María José Lista, Claire Beauvineau, Jorge González-García, Régis Guillot, Cécile Voisset,[...]. Eur J Med Chem 2019
14
50

Binding of cellular nucleolin with the viral core RNA G-quadruplex structure suppresses HCV replication.
Wen-Xiu Bian, Yan Xie, Xiao-Ning Wang, Guo-Hua Xu, Bo-Shi Fu, Shu Li, Gang Long, Xiang Zhou, Xiao-Lian Zhang. Nucleic Acids Res 2019
22
50


Effects of monovalent cations on folding kinetics of G-quadruplexes.
Jing You, Hui Li, Xi-Ming Lu, Wei Li, Peng-Ye Wang, Shuo-Xing Dou, Xu-Guang Xi. Biosci Rep 2017
17
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.