A citation-based method for searching scientific literature

Robert C Monsen, Lynn DeLeeuw, William L Dean, Robert D Gray, T Michael Sabo, Srinivas Chakravarthy, Jonathan B Chaires, John O Trent. Nucleic Acids Res 2020
Times Cited: 11







List of co-cited articles
98 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
977
63

G-Quadruplex Secondary Structure Obtained from Circular Dichroism Spectroscopy.
Rafael Del Villar-Guerra, John O Trent, Jonathan B Chaires. Angew Chem Int Ed Engl 2018
133
36

Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
36

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
661
36

The Structure and Function of DNA G-Quadruplexes.
Jochen Spiegel, Santosh Adhikari, Shankar Balasubramanian. Trends Chem 2020
100
36

Recent Progress of Targeted G-Quadruplex-Preferred Ligands Toward Cancer Therapy.
Sefan Asamitsu, Shunsuke Obata, Zutao Yu, Toshikazu Bando, Hiroshi Sugiyama. Molecules 2019
101
36

DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
348
36

CX-5461 is a DNA G-quadruplex stabilizer with selective lethality in BRCA1/2 deficient tumours.
Hong Xu, Marco Di Antonio, Steven McKinney, Veena Mathew, Brandon Ho, Nigel J O'Neil, Nancy Dos Santos, Jennifer Silvester, Vivien Wei, Jessica Garcia,[...]. Nat Commun 2017
177
36

The G-quadruplex-interactive molecule BRACO-19 inhibits tumor growth, consistent with telomere targeting and interference with telomerase function.
Angelika M Burger, Fangping Dai, Christoph M Schultes, Anthony P Reszka, Michael J Moore, John A Double, Stephen Neidle. Cancer Res 2005
366
27

Inhibition of human telomerase by a G-quadruplex-interactive compound.
D Sun, B Thompson, B E Cathers, M Salazar, S M Kerwin, J O Trent, T C Jenkins, S Neidle, L H Hurley. J Med Chem 1997
568
27

Coexistence of two distinct G-quadruplex conformations in the hTERT promoter.
Kah Wai Lim, Laurent Lacroix, Doris Jia En Yue, Joefina Kim Cheow Lim, Jocelyn Mei Wen Lim, Anh Tuân Phan. J Am Chem Soc 2010
100
27

G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
802
27

High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
498
27

Targeting Multiple Effector Pathways in Pancreatic Ductal Adenocarcinoma with a G-Quadruplex-Binding Small Molecule.
Chiara Marchetti, Katherine G Zyner, Stephan A Ohnmacht, Mathew Robson, Shozeb M Haider, Jennifer P Morton, Giovanni Marsico, Tam Vo, Sarah Laughlin-Toth, Ahmed A Ahmed,[...]. J Med Chem 2018
53
27

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
27

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
27

Genome-wide mapping of endogenous G-quadruplex DNA structures by chromatin immunoprecipitation and high-throughput sequencing.
Robert Hänsel-Hertsch, Jochen Spiegel, Giovanni Marsico, David Tannahill, Shankar Balasubramanian. Nat Protoc 2018
72
27

Anticancer activity of CX-3543: a direct inhibitor of rRNA biogenesis.
Denis Drygin, Adam Siddiqui-Jain, Sean O'Brien, Michael Schwaebe, Amy Lin, Josh Bliesath, Caroline B Ho, Chris Proffitt, Katy Trent, Jeffrey P Whitten,[...]. Cancer Res 2009
320
27

The major G-quadruplex formed in the human BCL-2 proximal promoter adopts a parallel structure with a 13-nt loop in K+ solution.
Prashansa Agrawal, Clement Lin, Raveendra I Mathad, Megan Carver, Danzhou Yang. J Am Chem Soc 2014
95
27

Telomeres and telomerase: three decades of progress.
Jerry W Shay, Woodring E Wright. Nat Rev Genet 2019
171
18

Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
18

Tailoring a lead-like compound targeting multiple G-quadruplex structures.
Jussara Amato, Chiara Platella, Sara Iachettini, Pasquale Zizza, Domenica Musumeci, Sandro Cosconati, Alessia Pagano, Ettore Novellino, Annamaria Biroccio, Antonio Randazzo,[...]. Eur J Med Chem 2019
15
18

G-quadruplexes in human promoters: A challenge for therapeutic applications.
Riccardo Rigo, Manlio Palumbo, Claudia Sissi. Biochim Biophys Acta Gen Subj 2017
49
18

A crystallographic and modelling study of a human telomeric RNA (TERRA) quadruplex.
Gavin W Collie, Shozeb M Haider, Stephen Neidle, Gary N Parkinson. Nucleic Acids Res 2010
146
18

Structural basis for telomeric G-quadruplex targeting by naphthalene diimide ligands.
Gavin W Collie, Rossella Promontorio, Sonja M Hampel, Marialuisa Micco, Stephen Neidle, Gary N Parkinson. J Am Chem Soc 2012
147
18

A G-quadruplex-binding compound showing anti-tumour activity in an in vivo model for pancreatic cancer.
Stephan A Ohnmacht, Chiara Marchetti, Mekala Gunaratnam, Rachael J Besser, Shozeb M Haider, Gloria Di Vita, Helen L Lowe, Maria Mellinas-Gomez, Seckou Diocou, Mathew Robson,[...]. Sci Rep 2015
57
18

KRAS oncogene repression in colon cancer cell lines by G-quadruplex binding indolo[3,2-c]quinolines.
João Lavrado, Hugo Brito, Pedro M Borralho, Stephan A Ohnmacht, Nam-Soon Kim, Clara Leitão, Sílvia Pisco, Mekala Gunaratnam, Cecília M P Rodrigues, Rui Moreira,[...]. Sci Rep 2015
45
18

Structure-based design of selective and potent G quadruplex-mediated telomerase inhibitors.
M Read, R J Harrison, B Romagnoli, F A Tanious, S H Gowan, A P Reszka, W D Wilson, L R Kelland, S Neidle. Proc Natl Acad Sci U S A 2001
333
18

G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
318
18

Loop-length-dependent folding of G-quadruplexes.
Pascale Hazel, Julian Huppert, Shankar Balasubramanian, Stephen Neidle. J Am Chem Soc 2004
332
18

Demonstration that drug-targeted down-regulation of MYC in non-Hodgkins lymphoma is directly mediated through the promoter G-quadruplex.
Robert V Brown, Forest L Danford, Vijay Gokhale, Laurence H Hurley, Tracy A Brooks. J Biol Chem 2011
108
18

Tertiary DNA structure in the single-stranded hTERT promoter fragment unfolds and refolds by parallel pathways via cooperative or sequential events.
Zhongbo Yu, Vanessa Gaerig, Yunxi Cui, HyunJin Kang, Vijay Gokhale, Yuan Zhao, Laurence H Hurley, Hanbin Mao. J Am Chem Soc 2012
55
18

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
656
18

Preferential Binding of π-Ligand Porphyrin Targeting 5'-5' Stacking Interface of Human Telomeric RNA G-Quadruplex Dimer.
Qige Qi, Chunfan Yang, Ye Xia, Shaoshi Guo, Di Song, Hongmei Su. J Phys Chem Lett 2019
7
28

The RNA Stem-Loop to G-Quadruplex Equilibrium Controls Mature MicroRNA Production inside the Cell.
Satyaprakash Pandey, Prachi Agarwala, Gopal G Jayaraj, Raimundo Gargallo, Souvik Maiti. Biochemistry 2015
47
18

Probing the G‑quadruplex from hsa-miR-3620-5p and inhibition of its interaction with the target sequence.
Wei Tan, Jiang Zhou, Jiangyong Gu, Ming Xu, Xiaojie Xu, Gu Yuan. Talanta 2016
17
18




G-quadruplex structures in TP53 intron 3: role in alternative splicing and in production of p53 mRNA isoforms.
Virginie Marcel, Phong L T Tran, Charlotte Sagne, Ghyslaine Martel-Planche, Laurence Vaslin, Marie-Paule Teulade-Fichou, Janet Hall, Jean-Louis Mergny, Pierre Hainaut, Eric Van Dyck. Carcinogenesis 2011
137
18

Telomerase downregulation induced by the G-quadruplex ligand 12459 in A549 cells is mediated by hTERT RNA alternative splicing.
Dennis Gomez, Thibault Lemarteleur, Laurent Lacroix, Patrick Mailliet, Jean-Louis Mergny, Jean-François Riou. Nucleic Acids Res 2004
158
18




A comparison of DNA and RNA quadruplex structures and stabilities.
Astrid Joachimi, Armin Benz, Jörg S Hartig. Bioorg Med Chem 2009
123
18

Restoration of miRNA-149 Expression by TmPyP4 Induced Unfolding of Quadruplex within Its Precursor.
Arpita Ghosh, Mary Krishna Ekka, Arpita Tawani, Amit Kumar, Debojyoti Chakraborty, Souvik Maiti. Biochemistry 2019
7
28

Insight into the Complexity of the i-Motif and G-Quadruplex DNA Structures Formed in the KRAS Promoter and Subsequent Drug-Induced Gene Repression.
Christine E Kaiser, Natalie A Van Ert, Prashansa Agrawal, Reena Chawla, Danzhou Yang, Laurence H Hurley. J Am Chem Soc 2017
63
18


Small-molecule-induced DNA damage identifies alternative DNA structures in human genes.
Raphaël Rodriguez, Kyle M Miller, Josep V Forment, Charles R Bradshaw, Mehran Nikan, Sébastien Britton, Tobias Oelschlaegel, Blerta Xhemalce, Shankar Balasubramanian, Stephen P Jackson. Nat Chem Biol 2012
386
18

HNRNPH1-dependent splicing of a fusion oncogene reveals a targetable RNA G-quadruplex interaction.
Carla Neckles, Robert E Boer, Nicholas Aboreden, Allison M Cross, Robert L Walker, Bong-Hyun Kim, Suntae Kim, John S Schneekloth, Natasha J Caplen. RNA 2019
10
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.