A citation-based method for searching scientific literature

Kuan-Wei Chen, Jun-An Chen. J Biomed Sci 2020
Times Cited: 7







List of co-cited articles
120 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.
Thomas Derrien, Rory Johnson, Giovanni Bussotti, Andrea Tanzer, Sarah Djebali, Hagen Tilgner, Gregory Guernec, David Martin, Angelika Merkel, David G Knowles,[...]. Genome Res 2012
57

The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing.
G Barry, J A Briggs, D P Vanichkina, E M Poth, N J Beveridge, V S Ratnu, S P Nayler, K Nones, J Hu, T W Bredy,[...]. Mol Psychiatry 2014
267
57

The long noncoding RNA neuroLNC regulates presynaptic activity by interacting with the neurodegeneration-associated protein TDP-43.
S Keihani, V Kluever, S Mandad, V Bansal, R Rahman, E Fritsch, L Caldi Gomes, A Gärtner, S Kügler, H Urlaub,[...]. Sci Adv 2019
16
42

An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.
Christine M Clemson, John N Hutchinson, Sergio A Sara, Alexander W Ensminger, Archa H Fox, Andrew Chess, Jeanne B Lawrence. Mol Cell 2009
890
42

Long Non-Coding RNAs in Neuronal Aging.
Diana Pereira Fernandes, Mainá Bitar, Frank M J Jacobs, Guy Barry. Noncoding RNA 2018
38
42

Mechanisms of Long Non-coding RNAs in Mammalian Nervous System Development, Plasticity, Disease, and Evolution.
James A Briggs, Ernst J Wolvetang, John S Mattick, John L Rinn, Guy Barry. Neuron 2015
233
42

lncRNA Functional Networks in Oligodendrocytes Reveal Stage-Specific Myelination Control by an lncOL1/Suz12 Complex in the CNS.
Danyang He, Jincheng Wang, Yulan Lu, Yaqi Deng, Chuntao Zhao, Lingli Xu, Yinhuai Chen, Yueh-Chiang Hu, Wenhao Zhou, Q Richard Lu. Neuron 2017
61
42

Specific expression of long noncoding RNAs in the mouse brain.
Tim R Mercer, Marcel E Dinger, Susan M Sunkin, Mark F Mehler, John S Mattick. Proc Natl Acad Sci U S A 2008
843
42


Landscape of transcription in human cells.
Sarah Djebali, Carrie A Davis, Angelika Merkel, Alex Dobin, Timo Lassmann, Ali Mortazavi, Andrea Tanzer, Julien Lagarde, Wei Lin, Felix Schlesinger,[...]. Nature 2012
42

ATXN2-AS, a gene antisense to ATXN2, is associated with spinocerebellar ataxia type 2 and amyotrophic lateral sclerosis.
Pan P Li, Xin Sun, Guangbin Xia, Nicolas Arbez, Sharan Paul, Shanshan Zhu, H Benjamin Peng, Christopher A Ross, Arnulf H Koeppen, Russell L Margolis,[...]. Ann Neurol 2016
32
42

Activity-dependent human brain coding/noncoding gene regulatory networks.
Leonard Lipovich, Fabien Dachet, Juan Cai, Shruti Bagla, Karina Balan, Hui Jia, Jeffrey A Loeb. Genetics 2012
125
42

Genome regulation by long noncoding RNAs.
John L Rinn, Howard Y Chang. Annu Rev Biochem 2012
42

Inhibition of natural antisense transcripts in vivo results in gene-specific transcriptional upregulation.
Farzaneh Modarresi, Mohammad Ali Faghihi, Miguel A Lopez-Toledano, Roya Pedram Fatemi, Marco Magistri, Shaun P Brothers, Marcel P van der Brug, Claes Wahlestedt. Nat Biotechnol 2012
416
42

Long noncoding RNA genes: conservation of sequence and brain expression among diverse amniotes.
Rebecca A Chodroff, Leo Goodstadt, Tamara M Sirey, Peter L Oliver, Kay E Davies, Eric D Green, Zoltán Molnár, Chris P Ponting. Genome Biol 2010
181
42

Unique features of long non-coding RNA biogenesis and function.
Jeffrey J Quinn, Howard Y Chang. Nat Rev Genet 2016
42


Molecular mechanisms of long noncoding RNAs.
Kevin C Wang, Howard Y Chang. Mol Cell 2011
42

Altered Expression of the Long Noncoding RNA NEAT1 in Huntington's Disease.
Jun-Sang Sunwoo, Soon-Tae Lee, Wooseok Im, Mijung Lee, Jung-Ick Byun, Keun-Hwa Jung, Kyung-Il Park, Ki-Young Jung, Sang Kun Lee, Kon Chu,[...]. Mol Neurobiol 2017
88
42

Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat.
Claudia Carrieri, Laura Cimatti, Marta Biagioli, Anne Beugnet, Silvia Zucchelli, Stefania Fedele, Elisa Pesce, Isidre Ferrer, Licio Collavin, Claudio Santoro,[...]. Nature 2012
604
42

An intronic ncRNA-dependent regulation of SORL1 expression affecting Aβ formation is upregulated in post-mortem Alzheimer's disease brain samples.
Eleonora Ciarlo, Sara Massone, Ilaria Penna, Mario Nizzari, Arianna Gigoni, Giorgio Dieci, Claudio Russo, Tullio Florio, Ranieri Cancedda, Aldo Pagano. Dis Model Mech 2013
102
42

Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase.
Mohammad Ali Faghihi, Farzaneh Modarresi, Ahmad M Khalil, Douglas E Wood, Barbara G Sahagan, Todd E Morgan, Caleb E Finch, Georges St Laurent, Paul J Kenny, Claes Wahlestedt. Nat Med 2008
955
42

Dendritic BC200 RNA in aging and in Alzheimer's disease.
El Mus, Patrick R Hof, Henri Tiedge. Proc Natl Acad Sci U S A 2007
207
42

Competition between a noncoding exon and introns: Gomafu contains tandem UACUAAC repeats and associates with splicing factor-1.
Hitomi Tsuiji, Rei Yoshimoto, Yuko Hasegawa, Masaaki Furuno, Minoru Yoshida, Shinichi Nakagawa. Genes Cells 2011
104
42


A long nuclear-retained non-coding RNA regulates synaptogenesis by modulating gene expression.
Delphine Bernard, Kannanganattu V Prasanth, Vidisha Tripathi, Sabrina Colasse, Tetsuya Nakamura, Zhenyu Xuan, Michael Q Zhang, Frédéric Sedel, Laurent Jourdren, Fanny Coulpier,[...]. EMBO J 2010
493
42

17A, a novel non-coding RNA, regulates GABA B alternative splicing and signaling in response to inflammatory stimuli and in Alzheimer disease.
Sara Massone, Irene Vassallo, Gloria Fiorino, Manuele Castelnuovo, Federica Barbieri, Roberta Borghi, Massimo Tabaton, Mauro Robello, Elena Gatta, Claudio Russo,[...]. Neurobiol Dis 2011
153
42

Psychiatric Disorders and lncRNAs: A Synaptic Match.
Francesco Rusconi, Elena Battaglioli, Marco Venturin. Int J Mol Sci 2020
15
42

Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed.
Agnieszka Rybak-Wolf, Christin Stottmeister, Petar Glažar, Marvin Jens, Natalia Pino, Sebastian Giusti, Mor Hanan, Mikaela Behm, Osnat Bartok, Reut Ashwal-Fluss,[...]. Mol Cell 2015
28


Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo.
Alexander D Ramos, Aaron Diaz, Abhinav Nellore, Ryan N Delgado, Ki-Youb Park, Gabriel Gonzales-Roybal, Michael C Oldham, Jun S Song, Daniel A Lim. Cell Stem Cell 2013
175
28

FUS affects circular RNA expression in murine embryonic stem cell-derived motor neurons.
Lorenzo Errichelli, Stefano Dini Modigliani, Pietro Laneve, Alessio Colantoni, Ivano Legnini, Davide Capauto, Alessandro Rosa, Riccardo De Santis, Rebecca Scarfò, Giovanna Peruzzi,[...]. Nat Commun 2017
215
28

Spatio-temporal regulation of circular RNA expression during porcine embryonic brain development.
Morten T Venø, Thomas B Hansen, Susanne T Venø, Bettina H Clausen, Manuela Grebing, Bente Finsen, Ida E Holm, Jørgen Kjems. Genome Biol 2015
272
28

Single-cell analysis of long non-coding RNAs in the developing human neocortex.
Siyuan John Liu, Tomasz J Nowakowski, Alex A Pollen, Jan H Lui, Max A Horlbeck, Frank J Attenello, Daniel He, Jonathan S Weissman, Arnold R Kriegstein, Aaron A Diaz,[...]. Genome Biol 2016
195
28

Neural circular RNAs are derived from synaptic genes and regulated by development and plasticity.
Xintian You, Irena Vlatkovic, Ana Babic, Tristan Will, Irina Epstein, Georgi Tushev, Güney Akbalik, Mantian Wang, Caspar Glock, Claudia Quedenau,[...]. Nat Neurosci 2015
631
28

Identification and characterization of a spinal muscular atrophy-determining gene.
S Lefebvre, L Bürglen, S Reboullet, O Clermont, P Burlet, L Viollet, B Benichou, C Cruaud, P Millasseau, M Zeviani. Cell 1995
28

Human Survival Motor Neuron genes generate a vast repertoire of circular RNAs.
Eric W Ottesen, Diou Luo, Joonbae Seo, Natalia N Singh, Ravindra N Singh. Nucleic Acids Res 2019
31
28

Circular RNAs are a large class of animal RNAs with regulatory potency.
Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti, Francesca Torti, Janna Krueger, Agnieszka Rybak, Luisa Maier, Sebastian D Mackowiak, Lea H Gregersen, Mathias Munschauer,[...]. Nature 2013
28

Evolution and functions of long noncoding RNAs.
Chris P Ponting, Peter L Oliver, Wolf Reik. Cell 2009
28

Gene activation of SMN by selective disruption of lncRNA-mediated recruitment of PRC2 for the treatment of spinal muscular atrophy.
Caroline J Woo, Verena K Maier, Roshni Davey, James Brennan, Guangde Li, John Brothers, Brian Schwartz, Susana Gordo, Anne Kasper, Trevor R Okamoto,[...]. Proc Natl Acad Sci U S A 2017
51
28

A Network of Noncoding Regulatory RNAs Acts in the Mammalian Brain.
Benjamin Kleaveland, Charlie Y Shi, Joanna Stefano, David P Bartel. Cell 2018
269
28

Non-coding RNA.
John S Mattick, Igor V Makunin. Hum Mol Genet 2006
28

Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation.
Tim R Mercer, Irfan A Qureshi, Solen Gokhan, Marcel E Dinger, Guangyu Li, John S Mattick, Mark F Mehler. BMC Neurosci 2010
294
28

ALS-associated mutations in FUS disrupt the axonal distribution and function of SMN.
Ewout J N Groen, Katsumi Fumoto, Anna M Blokhuis, Jooyeon Engelen-Lee, Yeping Zhou, Dianne M A van den Heuvel, Max Koppers, Femke van Diggelen, Jessica van Heest, Jeroen A A Demmers,[...]. Hum Mol Genet 2013
98
28

Characterization of the lncRNA transcriptome in mESC-derived motor neurons: Implications for FUS-ALS.
Silvia Biscarini, Davide Capauto, Giovanna Peruzzi, Lei Lu, Alessio Colantoni, Tiziana Santini, Neil A Shneider, Elisa Caffarelli, Pietro Laneve, Irene Bozzoni. Stem Cell Res 2018
15
28

The Antisense Transcript SMN-AS1 Regulates SMN Expression and Is a Novel Therapeutic Target for Spinal Muscular Atrophy.
Constantin d'Ydewalle, Daniel M Ramos, Noah J Pyles, Shi-Yan Ng, Mariusz Gorz, Celeste M Pilato, Karen Ling, Lingling Kong, Amanda J Ward, Lee L Rubin,[...]. Neuron 2017
77
28

Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain.
Jasmina Ponjavic, Peter L Oliver, Gerton Lunter, Chris P Ponting. PLoS Genet 2009
284
28

Antisense proline-arginine RAN dipeptides linked to C9ORF72-ALS/FTD form toxic nuclear aggregates that initiate in vitro and in vivo neuronal death.
Xinmei Wen, Wenzhi Tan, Thomas Westergard, Karthik Krishnamurthy, Shashirekha S Markandaiah, Yingxiao Shi, Shaoyu Lin, Neil A Shneider, John Monaghan, Udai B Pandey,[...]. Neuron 2014
302
28


The long non-coding RNA nuclear-enriched abundant transcript 1_2 induces paraspeckle formation in the motor neuron during the early phase of amyotrophic lateral sclerosis.
Yoshinori Nishimoto, Shinichi Nakagawa, Tetsuro Hirose, Hirotaka James Okano, Masaki Takao, Shinsuke Shibata, Satoshi Suyama, Ken-Ichiro Kuwako, Takao Imai, Shigeo Murayama,[...]. Mol Brain 2013
141
28


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.