A citation-based method for searching scientific literature

Jean-Francois Poulin, Zachary Gaertner, Oscar Andrés Moreno-Ramos, Rajeshwar Awatramani. Trends Neurosci 2020
Times Cited: 47







List of co-cited articles
444 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells.
Gioele La Manno, Daniel Gyllborg, Simone Codeluppi, Kaneyasu Nishimura, Carmen Salto, Amit Zeisel, Lars E Borm, Simon R W Stott, Enrique M Toledo, J Carlos Villaescusa,[...]. Cell 2016
355
44

Single-cell RNA sequencing reveals midbrain dopamine neuron diversity emerging during mouse brain development.
Katarína Tiklová, Åsa K Björklund, Laura Lahti, Alessandro Fiorenzano, Sara Nolbrant, Linda Gillberg, Nikolaos Volakakis, Chika Yokota, Markus M Hilscher, Thomas Hauling,[...]. Nat Commun 2019
79
40

Defining midbrain dopaminergic neuron diversity by single-cell gene expression profiling.
Jean-Francois Poulin, Jian Zou, Janelle Drouin-Ouellet, Kwang-Youn A Kim, Francesca Cicchetti, Rajeshwar B Awatramani. Cell Rep 2014
156
34

Sox6 and Otx2 control the specification of substantia nigra and ventral tegmental area dopamine neurons.
Lia Panman, Maria Papathanou, Ariadna Laguna, Tony Oosterveen, Nikolaos Volakakis, Dario Acampora, Idha Kurtsdotter, Takashi Yoshitake, Jan Kehr, Eliza Joodmardi,[...]. Cell Rep 2014
84
29

Mapping projections of molecularly defined dopamine neuron subtypes using intersectional genetic approaches.
Jean-Francois Poulin, Giuliana Caronia, Caitlyn Hofer, Qiaoling Cui, Brandon Helm, Charu Ramakrishnan, C Savio Chan, Daniel A Dombeck, Karl Deisseroth, Rajeshwar Awatramani. Nat Neurosci 2018
127
29

Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain.
Arpiar Saunders, Evan Z Macosko, Alec Wysoker, Melissa Goldman, Fenna M Krienen, Heather de Rivera, Elizabeth Bien, Matthew Baum, Laura Bortolin, Shuyu Wang,[...]. Cell 2018
526
27

Dopamine neuron systems in the brain: an update.
Anders Björklund, Stephen B Dunnett. Trends Neurosci 2007
981
25


Single-Cell RNA-Seq of Mouse Dopaminergic Neurons Informs Candidate Gene Selection for Sporadic Parkinson Disease.
Paul W Hook, Sarah A McClymont, Gabrielle H Cannon, William D Law, A Jennifer Morton, Loyal A Goff, Andrew S McCallion. Am J Hum Genet 2018
47
23

Dopamine neurons derived from human ES cells efficiently engraft in animal models of Parkinson's disease.
Sonja Kriks, Jae-Won Shim, Jinghua Piao, Yosif M Ganat, Dustin R Wakeman, Zhong Xie, Luis Carrillo-Reid, Gordon Auyeung, Chris Antonacci, Amanda Buch,[...]. Nature 2011
21

Selective neuronal vulnerability in Parkinson disease.
D James Surmeier, José A Obeso, Glenda M Halliday. Nat Rev Neurosci 2017
417
17

Whole-brain mapping of direct inputs to midbrain dopamine neurons.
Mitsuko Watabe-Uchida, Lisa Zhu, Sachie K Ogawa, Archana Vamanrao, Naoshige Uchida. Neuron 2012
702
17

Dopamine neurons projecting to the posterior striatum reinforce avoidance of threatening stimuli.
William Menegas, Korleki Akiti, Ryunosuke Amo, Naoshige Uchida, Mitsuko Watabe-Uchida. Nat Neurosci 2018
109
17

Ventral tegmental area: cellular heterogeneity, connectivity and behaviour.
Marisela Morales, Elyssa B Margolis. Nat Rev Neurosci 2017
452
17

Single-Cell Analysis Reveals a Close Relationship between Differentiating Dopamine and Subthalamic Nucleus Neuronal Lineages.
Nigel Kee, Nikolaos Volakakis, Agnete Kirkeby, Lina Dahl, Helena Storvall, Sara Nolbrant, Laura Lahti, Åsa K Björklund, Linda Gillberg, Eliza Joodmardi,[...]. Cell Stem Cell 2017
75
14

Intact-Brain Analyses Reveal Distinct Information Carried by SNc Dopamine Subcircuits.
Talia N Lerner, Carrie Shilyansky, Thomas J Davidson, Kathryn E Evans, Kevin T Beier, Kelly A Zalocusky, Ailey K Crow, Robert C Malenka, Liqun Luo, Raju Tomer,[...]. Cell 2015
331
14


Predictive Markers Guide Differentiation to Improve Graft Outcome in Clinical Translation of hESC-Based Therapy for Parkinson's Disease.
Agnete Kirkeby, Sara Nolbrant, Katarina Tiklova, Andreas Heuer, Nigel Kee, Tiago Cardoso, Daniella Rylander Ottosson, Mariah J Lelos, Pedro Rifes, Stephen B Dunnett,[...]. Cell Stem Cell 2017
123
12

How to make a midbrain dopaminergic neuron.
Ernest Arenas, Mark Denham, J Carlos Villaescusa. Development 2015
166
12

A neural substrate of prediction and reward.
W Schultz, P Dayan, P R Montague. Science 1997
12

Identification of intrinsic determinants of midbrain dopamine neurons.
Elisabet Andersson, Ulrika Tryggvason, Qiaolin Deng, Stina Friling, Zhanna Alekseenko, Benoit Robert, Thomas Perlmann, Johan Ericson. Cell 2006
423
12

Generation of regionally specified neural progenitors and functional neurons from human embryonic stem cells under defined conditions.
Agnete Kirkeby, Shane Grealish, Daniel A Wolf, Jenny Nelander, James Wood, Martin Lundblad, Olle Lindvall, Malin Parmar. Cell Rep 2012
401
12

Disentangling neural cell diversity using single-cell transcriptomics.
Jean-Francois Poulin, Bosiljka Tasic, Jens Hjerling-Leffler, Jeffrey M Trimarchi, Rajeshwar Awatramani. Nat Neurosci 2016
170
12

Human iPS cell-derived dopaminergic neurons function in a primate Parkinson's disease model.
Tetsuhiro Kikuchi, Asuka Morizane, Daisuke Doi, Hiroaki Magotani, Hirotaka Onoe, Takuya Hayashi, Hiroshi Mizuma, Sayuki Takara, Ryosuke Takahashi, Haruhisa Inoue,[...]. Nature 2017
303
12



Aldehyde dehydrogenase 1 defines and protects a nigrostriatal dopaminergic neuron subpopulation.
Guoxiang Liu, Jia Yu, Jinhui Ding, Chengsong Xie, Lixin Sun, Iakov Rudenko, Wang Zheng, Namratha Sastry, Jing Luo, Gay Rudow,[...]. J Clin Invest 2014
74
12

Circuit Architecture of VTA Dopamine Neurons Revealed by Systematic Input-Output Mapping.
Kevin T Beier, Elizabeth E Steinberg, Katherine E DeLoach, Stanley Xie, Kazunari Miyamichi, Lindsay Schwarz, Xiaojing J Gao, Eric J Kremer, Robert C Malenka, Liqun Luo. Cell 2015
420
12

Unique properties of mesoprefrontal neurons within a dual mesocorticolimbic dopamine system.
Stephan Lammel, Andrea Hetzel, Olga Häckel, Ian Jones, Birgit Liss, Jochen Roeper. Neuron 2008
591
12

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
12

Dopaminergic terminals in the nucleus accumbens but not the dorsal striatum corelease glutamate.
Garret D Stuber, Thomas S Hnasko, Jonathan P Britt, Robert H Edwards, Antonello Bonci. J Neurosci 2010
345
10

Role for VGLUT2 in selective vulnerability of midbrain dopamine neurons.
Thomas Steinkellner, Vivien Zell, Zachary J Farino, Mark S Sonders, Michael Villeneuve, Robin J Freyberg, Serge Przedborski, Wei Lu, Zachary Freyberg, Thomas S Hnasko. J Clin Invest 2018
42
11

Identification of midbrain floor plate radial glia-like cells as dopaminergic progenitors.
Sonia Bonilla, Anita C Hall, Luisa Pinto, Alessio Attardo, Magdalena Götz, Wieland B Huttner, Ernest Arenas. Glia 2008
92
10



Differences in neurogenic potential in floor plate cells along an anteroposterior location: midbrain dopaminergic neurons originate from mesencephalic floor plate cells.
Yuichi Ono, Tomoya Nakatani, Yoshimasa Sakamoto, Eri Mizuhara, Yasuko Minaki, Minoru Kumai, Akiko Hamaguchi, Miyuki Nishimura, Yoko Inoue, Hideki Hayashi,[...]. Development 2007
220
10

Human Trials of Stem Cell-Derived Dopamine Neurons for Parkinson's Disease: Dawn of a New Era.
Roger A Barker, Malin Parmar, Lorenz Studer, Jun Takahashi. Cell Stem Cell 2017
173
10

Temporal-spatial changes in Sonic Hedgehog expression and signaling reveal different potentials of ventral mesencephalic progenitors to populate distinct ventral midbrain nuclei.
Sandra Blaess, Gabriela O Bodea, Anna Kabanova, Soline Chanet, Emilie Mugniery, Amin Derouiche, Daniel Stephen, Alexandra L Joyner. Neural Dev 2011
80
10

Cell type-specific gene expression of midbrain dopaminergic neurons reveals molecules involved in their vulnerability and protection.
Chee Yeun Chung, Hyemyung Seo, Kai Christian Sonntag, Andrew Brooks, Ling Lin, Ole Isacson. Hum Mol Genet 2005
259
10

The future of stem cell therapies for Parkinson disease.
Malin Parmar, Shane Grealish, Claire Henchcliffe. Nat Rev Neurosci 2020
76
10

Human ESC-derived dopamine neurons show similar preclinical efficacy and potency to fetal neurons when grafted in a rat model of Parkinson's disease.
Shane Grealish, Elsa Diguet, Agnete Kirkeby, Bengt Mattsson, Andreas Heuer, Yann Bramoulle, Nadja Van Camp, Anselme L Perrier, Philippe Hantraye, Anders Björklund,[...]. Cell Stem Cell 2014
253
10

Identification of novel risk loci, causal insights, and heritable risk for Parkinson's disease: a meta-analysis of genome-wide association studies.
Mike A Nalls, Cornelis Blauwendraat, Costanza L Vallerga, Karl Heilbron, Sara Bandres-Ciga, Diana Chang, Manuela Tan, Demis A Kia, Alastair J Noyce, Angli Xue,[...]. Lancet Neurol 2019
486
10

Input-specific control of reward and aversion in the ventral tegmental area.
Stephan Lammel, Byung Kook Lim, Chen Ran, Kee Wui Huang, Michael J Betley, Kay M Tye, Karl Deisseroth, Robert C Malenka. Nature 2012
800
10

Single nigrostriatal dopaminergic neurons form widely spread and highly dense axonal arborizations in the neostriatum.
Wakoto Matsuda, Takahiro Furuta, Kouichi C Nakamura, Hiroyuki Hioki, Fumino Fujiyama, Ryohachi Arai, Takeshi Kaneko. J Neurosci 2009
439
10

Specialized coding of sensory, motor and cognitive variables in VTA dopamine neurons.
Ben Engelhard, Joel Finkelstein, Julia Cox, Weston Fleming, Hee Jae Jang, Sharon Ornelas, Sue Ann Koay, Stephan Y Thiberge, Nathaniel D Daw, David W Tank,[...]. Nature 2019
122
10

Dopamine neurons projecting to the posterior striatum form an anatomically distinct subclass.
William Menegas, Joseph F Bergan, Sachie K Ogawa, Yoh Isogai, Kannan Umadevi Venkataraju, Pavel Osten, Naoshige Uchida, Mitsuko Watabe-Uchida. Elife 2015
161
10

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
10


Glutamatergic and dopaminergic neurons in the mouse ventral tegmental area.
Tsuyoshi Yamaguchi, Jia Qi, Hui-Ling Wang, Shiliang Zhang, Marisela Morales. Eur J Neurosci 2015
82
8

Molecular heterogeneity of midbrain dopaminergic neurons--Moving toward single cell resolution.
Angela Anderegg, Jean-Francois Poulin, Rajeshwar Awatramani. FEBS Lett 2015
40
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.