A citation-based method for searching scientific literature

Marjia Afrin, Hanadi Kishmiri, Ranjodh Sandhu, M A G Rabbani, Bibo Li. mSphere 2020
Times Cited: 7







List of co-cited articles
172 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Telomere and Subtelomere R-loops and Antigenic Variation in Trypanosomes.
Arpita Saha, Vishal P Nanavaty, Bibo Li. J Mol Biol 2020
8
71

RAP1 is essential for silencing telomeric variant surface glycoprotein genes in Trypanosoma brucei.
Xiaofeng Yang, Luisa M Figueiredo, Amin Espinal, Eiji Okubo, Bibo Li. Cell 2009
115
71

Suppression of subtelomeric VSG switching by Trypanosoma brucei TRF requires its TTAGGG repeat-binding activity.
Sanaa E Jehi, Xiaohua Li, Ranjodh Sandhu, Fei Ye, Imaan Benmerzouga, Mingjie Zhang, Yanxiang Zhao, Bibo Li. Nucleic Acids Res 2014
27
71

Genome organization and DNA accessibility control antigenic variation in trypanosomes.
Laura S M Müller, Raúl O Cosentino, Konrad U Förstner, Julien Guizetti, Carolin Wedel, Noam Kaplan, Christian J Janzen, Panagiota Arampatzi, Jörg Vogel, Sascha Steinbiss,[...]. Nature 2018
62
71


Trypanosoma brucei RAP1 maintains telomere and subtelomere integrity by suppressing TERRA and telomeric RNA:DNA hybrids.
Vishal Nanavaty, Ranjodh Sandhu, Sanaa E Jehi, Unnati M Pandya, Bibo Li. Nucleic Acids Res 2017
32
71

Trypanosome telomeres are protected by a homologue of mammalian TRF2.
Bibo Li, Amin Espinal, George A M Cross. Mol Cell Biol 2005
59
57

Monoallelic expression and epigenetic inheritance sustained by a Trypanosoma brucei variant surface glycoprotein exclusion complex.
Joana Faria, Lucy Glover, Sebastian Hutchinson, Cordula Boehm, Mark C Field, David Horn. Nat Commun 2019
22
57




A yeast-endonuclease-generated DNA break induces antigenic switching in Trypanosoma brucei.
Catharine E Boothroyd, Oliver Dreesen, Tatyana Leonova, K Ina Ly, Luisa M Figueiredo, George A M Cross, F Nina Papavasiliou. Nature 2009
100
57

Capturing the variant surface glycoprotein repertoire (the VSGnome) of Trypanosoma brucei Lister 427.
George A M Cross, Hee-Sook Kim, Bill Wickstead. Mol Biochem Parasitol 2014
96
57


Telomere length affects the frequency and mechanism of antigenic variation in Trypanosoma brucei.
Galadriel A Hovel-Miner, Catharine E Boothroyd, Monica Mugnier, Oliver Dreesen, George A M Cross, F Nina Papavasiliou. PLoS Pathog 2012
46
57

Ribonuclease H1-targeted R-loops in surface antigen gene expression sites can direct trypanosome immune evasion.
Emma Briggs, Kathryn Crouch, Leandro Lemgruber, Craig Lapsley, Richard McCulloch. PLoS Genet 2018
24
57

Shelterin-Mediated Telomere Protection.
Titia de Lange. Annu Rev Genet 2018
235
57

TbRAP1 has an unusual duplex DNA binding activity required for its telomere localization and VSG silencing.
Marjia Afrin, Amit Kumar Gaurav, Xian Yang, Xuehua Pan, Yanxiang Zhao, Bibo Li. Sci Adv 2020
4
100

DNA ligase IV-dependent NHEJ of deprotected mammalian telomeres in G1 and G2.
Agata Smogorzewska, Jan Karlseder, Heidi Holtgreve-Grez, Anna Jauch, Titia de Lange. Curr Biol 2002
296
57

Homologous recombination generates T-loop-sized deletions at human telomeres.
Richard C Wang, Agata Smogorzewska, Titia de Lange. Cell 2004
400
57

TRF2 protects human telomeres from end-to-end fusions.
B van Steensel, A Smogorzewska, T de Lange. Cell 1998
57






The phosphoproteome of bloodstream form Trypanosoma brucei, causative agent of African sleeping sickness.
Isabelle R E Nett, David M A Martin, Diego Miranda-Saavedra, Douglas Lamont, Jonathan D Barber, Angela Mehlert, Michael A J Ferguson. Mol Cell Proteomics 2009
118
42


African trypanosomes expressing multiple VSGs are rapidly eliminated by the host immune system.
Francisco Aresta-Branco, Margarida Sanches-Vaz, Fabio Bento, João A Rodrigues, Luisa M Figueiredo. Proc Natl Acad Sci U S A 2019
6
50


Trypanosomal histone γH2A and the DNA damage response.
Lucy Glover, David Horn. Mol Biochem Parasitol 2012
62
42

Trypanosoma brucei ribonuclease H2A is an essential R-loop processing enzyme whose loss causes DNA damage during transcription initiation and antigenic variation.
Emma Briggs, Kathryn Crouch, Leandro Lemgruber, Graham Hamilton, Craig Lapsley, Richard McCulloch. Nucleic Acids Res 2019
14
42

Evaluation of mechanisms that may generate DNA lesions triggering antigenic variation in African trypanosomes.
Marcelo Santos da Silva, Galadriel A Hovel-Miner, Emma M Briggs, Maria Carolina Elias, Richard McCulloch. PLoS Pathog 2018
16
42


VEX1 controls the allelic exclusion required for antigenic variation in trypanosomes.
Lucy Glover, Sebastian Hutchinson, Sam Alsford, David Horn. Proc Natl Acad Sci U S A 2016
56
42

Evidence for regulated expression of Telomeric Repeat-containing RNAs (TERRA) in parasitic trypanosomatids.
Jeziel D Damasceno, Gabriel LA Silva, Christian Tschudi, Luiz Ro Tosi. Mem Inst Oswaldo Cruz 2017
7
42


The role of genomic location and flanking 3'UTR in the generation of functional levels of variant surface glycoprotein in Trypanosoma brucei.
Sophie Ridewood, Cher-Pheng Ooi, Belinda Hall, Anna Trenaman, Nadina Vasileva Wand, Georgios Sioutas, Iris Scherwitzl, Gloria Rudenko. Mol Microbiol 2017
15
42

CpG-island promoters drive transcription of human telomeres.
Solomon G Nergadze, Benjamin O Farnung, Harry Wischnewski, Lela Khoriauli, Valerio Vitelli, Raghav Chawla, Elena Giulotto, Claus M Azzalin. RNA 2009
151
42

Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends.
Claus M Azzalin, Patrick Reichenbach, Lela Khoriauli, Elena Giulotto, Joachim Lingner. Science 2007
829
42


TRF1 participates in chromosome end protection by averting TRF2-dependent telomeric R loops.
Yong Woo Lee, Rajika Arora, Harry Wischnewski, Claus M Azzalin. Nat Struct Mol Biol 2018
34
42



TERRA RNA binding to TRF2 facilitates heterochromatin formation and ORC recruitment at telomeres.
Zhong Deng, Julie Norseen, Andreas Wiedmer, Harold Riethman, Paul M Lieberman. Mol Cell 2009
355
42

The molecular karyotype of the megabase chromosomes of Trypanosoma brucei stock 427.
S E Melville, V Leech, M Navarro, G A Cross. Mol Biochem Parasitol 2000
57
42

A mammalian factor that binds telomeric TTAGGG repeats in vitro.
Z Zhong, L Shiue, S Kaplan, T de Lange. Mol Cell Biol 1992
204
42

Telomeric position effect: from the yeast paradigm to human pathologies?
Alexandre Ottaviani, Eric Gilson, Frédérique Magdinier. Biochimie 2008
100
42

Transcription of telomere repeats in protozoa.
G Rudenko, L H Van der Ploeg. EMBO J 1989
60
42

Subtelomeric repetitive elements determine TERRA regulation by Rap1/Rif and Rap1/Sir complexes in yeast.
Nahid Iglesias, Sophie Redon, Verena Pfeiffer, Martina Dees, Joachim Lingner, Brian Luke. EMBO Rep 2011
69
42


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.