A citation-based method for searching scientific literature

Juan F Burgueño, Maria T Abreu. Nat Rev Gastroenterol Hepatol 2020
Times Cited: 136







List of co-cited articles
825 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A Map of Toll-like Receptor Expression in the Intestinal Epithelium Reveals Distinct Spatial, Cell Type-Specific, and Temporal Patterns.
April E Price, Kiarash Shamardani, Kyler A Lugo, Jacques Deguine, Allison W Roberts, Bettina L Lee, Gregory M Barton. Immunity 2018
159
18


Recognition of commensal microflora by toll-like receptors is required for intestinal homeostasis.
Seth Rakoff-Nahoum, Justin Paglino, Fatima Eslami-Varzaneh, Stephen Edberg, Ruslan Medzhitov. Cell 2004
14


Toll-like Receptors and Inflammatory Bowel Disease.
Yue Lu, Xinrui Li, Shanshan Liu, Yifan Zhang, Dekai Zhang. Front Immunol 2018
132
12

Gut microbial colonization orchestrates TLR2 expression, signaling and epithelial proliferation in the small intestinal mucosa.
Nives Hörmann, Inês Brandão, Sven Jäckel, Nelli Ens, Maren Lillich, Ulrich Walter, Christoph Reinhardt. PLoS One 2014
69
13

Regional specialization within the intestinal immune system.
Allan M Mowat, William W Agace. Nat Rev Immunol 2014
761
9

Intestinal Epithelial Toll-Like Receptor 4 Signaling Affects Epithelial Function and Colonic Microbiota and Promotes a Risk for Transmissible Colitis.
Rishu Dheer, Rebeca Santaolalla, Julie M Davies, Jessica K Lang, Matthew C Phillips, Cristhine Pastorini, Maria T Vazquez-Pertejo, Maria T Abreu. Infect Immun 2016
81
9


Maintenance of colonic homeostasis by distinctive apical TLR9 signalling in intestinal epithelial cells.
Jongdae Lee, Ji-Hun Mo, Kyoko Katakura, Irit Alkalay, Adam N Rucker, Yu-Tsueng Liu, Hyun-Ku Lee, Carol Shen, Gady Cojocaru, Steve Shenouda,[...]. Nat Cell Biol 2006
441
8

Toll-like receptor-4 is required for intestinal response to epithelial injury and limiting bacterial translocation in a murine model of acute colitis.
Masayuki Fukata, Kathrin S Michelsen, Rajaraman Eri, Lisa S Thomas, Bing Hu, Katie Lukasek, Cynthia C Nast, Juan Lechago, Ruliang Xu, Yoshikazu Naiki,[...]. Am J Physiol Gastrointest Liver Physiol 2005
390
8

The Intestinal Epithelium: Central Coordinator of Mucosal Immunity.
Joannie M Allaire, Shauna M Crowley, Hong T Law, Sun-Young Chang, Hyun-Jeong Ko, Bruce A Vallance. Trends Immunol 2018
321
8

Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche.
Toshiro Sato, Robert G Vries, Hugo J Snippert, Marc van de Wetering, Nick Barker, Daniel E Stange, Johan H van Es, Arie Abo, Pekka Kujala, Peter J Peters,[...]. Nature 2009
7

A sentinel goblet cell guards the colonic crypt by triggering Nlrp6-dependent Muc2 secretion.
George M H Birchenough, Elisabeth E L Nyström, Malin E V Johansson, Gunnar C Hansson. Science 2016
300
7


Pattern recognition receptors and inflammation.
Osamu Takeuchi, Shizuo Akira. Cell 2010
7

Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation.
Nicholas Arpaia, Clarissa Campbell, Xiying Fan, Stanislav Dikiy, Joris van der Veeken, Paul deRoos, Hui Liu, Justin R Cross, Klaus Pfeffer, Paul J Coffer,[...]. Nature 2013
7

The gut microbiota--masters of host development and physiology.
Felix Sommer, Fredrik Bäckhed. Nat Rev Microbiol 2013
7

Toll-like Receptors and the Control of Immunity.
Katherine A Fitzgerald, Jonathan C Kagan. Cell 2020
551
7


Toll-like receptor 4 is expressed on intestinal stem cells and regulates their proliferation and apoptosis via the p53 up-regulated modulator of apoptosis.
Matthew D Neal, Chhinder P Sodhi, Hongpeng Jia, Mitchell Dyer, Charlotte E Egan, Ibrahim Yazji, Misty Good, Amin Afrazi, Ryan Marino, Dennis Slagle,[...]. J Biol Chem 2012
139
6


The gastrointestinal mucus system in health and disease.
Malin E V Johansson, Henrik Sjövall, Gunnar C Hansson. Nat Rev Gastroenterol Hepatol 2013
684
6

Colitis-associated variant of TLR2 causes impaired mucosal repair because of TFF3 deficiency.
Daniel K Podolsky, Guido Gerken, Annette Eyking, Elke Cario. Gastroenterology 2009
162
6


Regulation of human epithelial tight junction proteins by Lactobacillus plantarum in vivo and protective effects on the epithelial barrier.
Jurgen Karczewski, Freddy J Troost, Irene Konings, Jan Dekker, Michiel Kleerebezem, Robert-Jan M Brummer, Jerry M Wells. Am J Physiol Gastrointest Liver Physiol 2010
374
6


Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics.
Glenn R Gibson, Robert Hutkins, Mary Ellen Sanders, Susan L Prescott, Raylene A Reimer, Seppo J Salminen, Karen Scott, Catherine Stanton, Kelly S Swanson, Patrice D Cani,[...]. Nat Rev Gastroenterol Hepatol 2017
6




Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases.
Jason Lloyd-Price, Cesar Arze, Ashwin N Ananthakrishnan, Melanie Schirmer, Julian Avila-Pacheco, Tiffany W Poon, Elizabeth Andrews, Nadim J Ajami, Kevin S Bonham, Colin J Brislawn,[...]. Nature 2019
900
5


NLRP6 inflammasome regulates colonic microbial ecology and risk for colitis.
Eran Elinav, Till Strowig, Andrew L Kau, Jorge Henao-Mejia, Christoph A Thaiss, Carmen J Booth, David R Peaper, John Bertin, Stephanie C Eisenbarth, Jeffrey I Gordon,[...]. Cell 2011
5

Role of the microbiota in immunity and inflammation.
Yasmine Belkaid, Timothy W Hand. Cell 2014
5

The microbiome and innate immunity.
Christoph A Thaiss, Niv Zmora, Maayan Levy, Eran Elinav. Nature 2016
910
5

Lipopolysaccharide from Crypt-Specific Core Microbiota Modulates the Colonic Epithelial Proliferation-to-Differentiation Balance.
Tomoaki Naito, Céline Mulet, Cristina De Castro, Antonio Molinaro, Azadeh Saffarian, Giulia Nigro, Marion Bérard, Mélanie Clerc, Amy B Pedersen, Philippe J Sansonetti,[...]. mBio 2017
58
8

Innate Recognition of the Microbiota by TLR1 Promotes Epithelial Homeostasis and Prevents Chronic Inflammation.
Karishma Kamdar, Andrew M F Johnson, Denise Chac, Kalisa Myers, Vrishika Kulur, Kyle Truevillian, R William DePaolo. J Immunol 2018
20
25

Intestinal epithelial Toll-like receptor 4 regulates goblet cell development and is required for necrotizing enterocolitis in mice.
Chhinder P Sodhi, Matthew D Neal, Richard Siggers, Shonan Sho, Congrong Ma, Maria F Branca, Thomas Prindle, Anthony M Russo, Amin Afrazi, Misty Good,[...]. Gastroenterology 2012
195
5

Tryptophan catabolites from microbiota engage aryl hydrocarbon receptor and balance mucosal reactivity via interleukin-22.
Teresa Zelante, Rossana G Iannitti, Cristina Cunha, Antonella De Luca, Gloria Giovannini, Giuseppe Pieraccini, Riccardo Zecchi, Carmen D'Angelo, Cristina Massi-Benedetti, Francesca Fallarino,[...]. Immunity 2013
5

Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells.
Yukihiro Furusawa, Yuuki Obata, Shinji Fukuda, Takaho A Endo, Gaku Nakato, Daisuke Takahashi, Yumiko Nakanishi, Chikako Uetake, Keiko Kato, Tamotsu Kato,[...]. Nature 2013
5

Changes in gut microbiota control metabolic endotoxemia-induced inflammation in high-fat diet-induced obesity and diabetes in mice.
Patrice D Cani, Rodrigo Bibiloni, Claude Knauf, Aurélie Waget, Audrey M Neyrinck, Nathalie M Delzenne, Rémy Burcelin. Diabetes 2008
5

The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis.
Patrick M Smith, Michael R Howitt, Nicolai Panikov, Monia Michaud, Carey Ann Gallini, Mohammad Bohlooly-Y, Jonathan N Glickman, Wendy S Garrett. Science 2013
5

Host-bacterial mutualism in the human intestine.
Fredrik Bäckhed, Ruth E Ley, Justin L Sonnenburg, Daniel A Peterson, Jeffrey I Gordon. Science 2005
5

Importance and regulation of the colonic mucus barrier in a mouse model of colitis.
J Petersson, O Schreiber, G C Hansson, S J Gendler, A Velcich, J O Lundberg, S Roos, L Holm, M Phillipson. Am J Physiol Gastrointest Liver Physiol 2011
227
5

Identification of stem cells in small intestine and colon by marker gene Lgr5.
Nick Barker, Johan H van Es, Jeroen Kuipers, Pekka Kujala, Maaike van den Born, Miranda Cozijnsen, Andrea Haegebarth, Jeroen Korving, Harry Begthel, Peter J Peters,[...]. Nature 2007
5


Bacteria penetrate the normally impenetrable inner colon mucus layer in both murine colitis models and patients with ulcerative colitis.
Malin E V Johansson, Jenny K Gustafsson, Jessica Holmén-Larsson, Karolina S Jabbar, Lijun Xia, Hua Xu, Fayez K Ghishan, Frederic A Carvalho, Andrew T Gewirtz, Henrik Sjövall,[...]. Gut 2014
542
5

Cell Biology of Tight Junction Barrier Regulation and Mucosal Disease.
Aaron Buckley, Jerrold R Turner. Cold Spring Harb Perspect Biol 2018
267
5



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.