A citation-based method for searching scientific literature

Aurora Irene Idilli, Emilio Cusanelli, Francesca Pagani, Francesco Berardinelli, Manuel Bernabé, María Luisa Cayuela, Pietro Luigi Poliani, Maria Caterina Mione. Front Cell Dev Biol 2020
Times Cited: 4







List of co-cited articles
15 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The C-Circle Assay for alternative-lengthening-of-telomeres activity.
Jeremy D Henson, Loretta M Lau, Sylvia Koch, Nancy Martin La Rotta, Rebecca A Dagg, Roger R Reddel. Methods 2017
49
75

A novel brain tumour model in zebrafish reveals the role of YAP activation in MAPK- and PI3K-induced malignant growth.
Marie Mayrhofer, Victor Gourain, Markus Reischl, Pierre Affaticati, Arnim Jenett, Jean-Stephane Joly, Matteo Benelli, Francesca Demichelis, Pietro Luigi Poliani, Dirk Sieger,[...]. Dis Model Mech 2017
29
50

Alternative lengthening of telomeres: models, mechanisms and implications.
Anthony J Cesare, Roger R Reddel. Nat Rev Genet 2010
562
50

Prevalence of the alternative lengthening of telomeres telomere maintenance mechanism in human cancer subtypes.
Christopher M Heaphy, Andrea P Subhawong, Seung-Mo Hong, Michael G Goggins, Elizabeth A Montgomery, Edward Gabrielson, George J Netto, Jonathan I Epstein, Tamara L Lotan, William H Westra,[...]. Am J Pathol 2011
279
50

The 2016 World Health Organization Classification of Tumors of the Central Nervous System: a summary.
David N Louis, Arie Perry, Guido Reifenberger, Andreas von Deimling, Dominique Figarella-Branger, Webster K Cavenee, Hiroko Ohgaki, Otmar D Wiestler, Paul Kleihues, David W Ellison. Acta Neuropathol 2016
50

Measurement of telomere length by the Southern blot analysis of terminal restriction fragment lengths.
Masayuki Kimura, Rivka C Stone, Steven C Hunt, Joan Skurnick, Xiaobin Lu, Xiaojian Cao, Calvin B Harley, Abraham Aviv. Nat Protoc 2010
259
50


DiAna, an ImageJ tool for object-based 3D co-localization and distance analysis.
Jean-François Gilles, Marc Dos Santos, Thomas Boudier, Susanne Bolte, Nicolas Heck. Methods 2017
37
50

RNaseH1 regulates TERRA-telomeric DNA hybrids and telomere maintenance in ALT tumour cells.
Rajika Arora, Yongwoo Lee, Harry Wischnewski, Catherine M Brun, Tobias Schwarz, Claus M Azzalin. Nat Commun 2014
196
50

Loss of ATRX, genome instability, and an altered DNA damage response are hallmarks of the alternative lengthening of telomeres pathway.
Courtney A Lovejoy, Wendi Li, Steven Reisenweber, Supawat Thongthip, Joanne Bruno, Titia de Lange, Saurav De, John H J Petrini, Patricia A Sung, Maria Jasin,[...]. PLoS Genet 2012
342
50

A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.
Zhong Deng, Zhuo Wang, Nick Stong, Robert Plasschaert, Aliah Moczan, Horng-Shen Chen, Sufeng Hu, Priyankara Wikramasinghe, Ramana V Davuluri, Marisa S Bartolomei,[...]. EMBO J 2012
103
50

Alternative Lengthening of Telomeres is characterized by reduced compaction of telomeric chromatin.
Harikleia Episkopou, Irena Draskovic, Amandine Van Beneden, Gaëlle Tilman, Marina Mattiussi, Matthieu Gobin, Nausica Arnoult, Arturo Londoño-Vallejo, Anabelle Decottignies. Nucleic Acids Res 2014
96
50

Alternative Lengthening of Telomeres: DNA Repair Pathways Converge.
Alexander P Sobinoff, Hilda A Pickett. Trends Genet 2017
68
50

Extensive Proliferation of Human Cancer Cells with Ever-Shorter Telomeres.
Rebecca A Dagg, Hilda A Pickett, Axel A Neumann, Christine E Napier, Jeremy D Henson, Erdahl T Teber, Jonathan W Arthur, C Patrick Reynolds, Jayne Murray, Michelle Haber,[...]. Cell Rep 2017
33
50

DNA C-circles are specific and quantifiable markers of alternative-lengthening-of-telomeres activity.
Jeremy D Henson, Ying Cao, Lily I Huschtscha, Andy C Chang, Amy Y M Au, Hilda A Pickett, Roger R Reddel. Nat Biotechnol 2009
264
50

Senescence induced by altered telomere state, not telomere loss.
Jan Karlseder, Agata Smogorzewska, Titia de Lange. Science 2002
587
25

ATM and ATR Signaling Regulate the Recruitment of Human Telomerase to Telomeres.
Adrian S Tong, J Lewis Stern, Agnel Sfeir, Melissa Kartawinata, Titia de Lange, Xu-Dong Zhu, Tracy M Bryan. Cell Rep 2015
72
25

Presence of alternative lengthening of telomeres mechanism in patients with glioblastoma identifies a less aggressive tumor type with longer survival.
Kerrie L McDonald, Julie McDonnell, Alessandra Muntoni, Jeremy D Henson, Monika E Hegi, Andreas von Deimling, Helen R Wheeler, Ray J Cook, Michael T Biggs, Nicholas S Little,[...]. J Neuropathol Exp Neurol 2010
62
25

BioMart--biological queries made easy.
Damian Smedley, Syed Haider, Benoit Ballester, Richard Holland, Darin London, Gudmundur Thorisson, Arek Kasprzyk. BMC Genomics 2009
411
25

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
25

Alternative lengthening of telomeres is enriched in, and impacts survival of TP53 mutant pediatric malignant brain tumors.
Joshua Mangerel, Aryeh Price, Pedro Castelo-Branco, Jack Brzezinski, Pawel Buczkowicz, Patricia Rakopoulos, Diana Merino, Berivan Baskin, Jonathan Wasserman, Matthew Mistry,[...]. Acta Neuropathol 2014
28
25

Circos: an information aesthetic for comparative genomics.
Martin Krzywinski, Jacqueline Schein, Inanç Birol, Joseph Connors, Randy Gascoyne, Doug Horsman, Steven J Jones, Marco A Marra. Genome Res 2009
25

Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma.
Jeremy Schwartzentruber, Andrey Korshunov, Xiao-Yang Liu, David T W Jones, Elke Pfaff, Karine Jacob, Dominik Sturm, Adam M Fontebasso, Dong-Anh Khuong Quang, Martje Tönjes,[...]. Nature 2012
25

TelNet - a database for human and yeast genes involved in telomere maintenance.
Delia M Braun, Inn Chung, Nick Kepper, Katharina I Deeg, Karsten Rippe. BMC Genet 2018
11
25

Telomeres and aging.
Jerry W Shay. Curr Opin Cell Biol 2018
52
25

Rapid induction of alternative lengthening of telomeres by depletion of the histone chaperone ASF1.
Roderick J O'Sullivan, Nausica Arnoult, Daniel H Lackner, Liana Oganesian, Candy Haggblom, Armelle Corpet, Genevieve Almouzni, Jan Karlseder. Nat Struct Mol Biol 2014
144
25

The alternative lengthening of telomere phenotype is significantly associated with loss of ATRX expression in high-grade pediatric and adult astrocytomas: a multi-institutional study of 214 astrocytomas.
Malak Abedalthagafi, Joanna J Phillips, Grace E Kim, Sabine Mueller, Daphne A Haas-Kogen, Roxanne E Marshall, Sidney E Croul, Mariarita R Santi, Jing Cheng, Shengmei Zhou,[...]. Mod Pathol 2013
71
25

The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data.
Ethan Cerami, Jianjiong Gao, Ugur Dogrusoz, Benjamin E Gross, Selcuk Onur Sumer, Bülent Arman Aksoy, Anders Jacobsen, Caitlin J Byrne, Michael L Heuer, Erik Larsson,[...]. Cancer Discov 2012
25

Epigenetic features of human telomeres.
María D Cubiles, Sonia Barroso, María I Vaquero-Sedas, Alicia Enguix, Andrés Aguilera, Miguel A Vega-Palas. Nucleic Acids Res 2018
40
25

Pediatric Brain Tumors.
Mai Dang, Peter C Phillips. Continuum (Minneap Minn) 2017
15
25


Origin-dependent initiation of DNA replication within telomeric sequences.
Isabel Kurth, Jean Gautier. Nucleic Acids Res 2010
12
25

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update.
Maxim V Kuleshov, Matthew R Jones, Andrew D Rouillard, Nicolas F Fernandez, Qiaonan Duan, Zichen Wang, Simon Koplev, Sherry L Jenkins, Kathleen M Jagodnik, Alexander Lachmann,[...]. Nucleic Acids Res 2016
25

Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication.
Agnel Sfeir, Settapong T Kosiyatrakul, Dirk Hockemeyer, Sheila L MacRae, Jan Karlseder, Carl L Schildkraut, Titia de Lange. Cell 2009
636
25


Super-resolution fluorescence imaging of telomeres reveals TRF2-dependent T-loop formation.
Ylli Doksani, John Y Wu, Titia de Lange, Xiaowei Zhuang. Cell 2013
260
25

Coexistence of alternative lengthening of telomeres and telomerase in hTERT-transfected GM847 cells.
K Perrem, L M Colgin, A A Neumann, T R Yeager, R R Reddel. Mol Cell Biol 2001
192
25

Paediatric and adult glioblastoma: multiform (epi)genomic culprits emerge.
Dominik Sturm, Sebastian Bender, David T W Jones, Peter Lichter, Jacques Grill, Oren Becher, Cynthia Hawkins, Jacek Majewski, Chris Jones, Joseph F Costello,[...]. Nat Rev Cancer 2014
317
25

RPA-like mammalian Ctc1-Stn1-Ten1 complex binds to single-stranded DNA and protects telomeres independently of the Pot1 pathway.
Yasuyuki Miyake, Mirai Nakamura, Akira Nabetani, Shintaro Shimamura, Miki Tamura, Shin Yonehara, Motoki Saito, Fuyuki Ishikawa. Mol Cell 2009
225
25

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
25

SETDB1-dependent heterochromatin stimulates alternative lengthening of telomeres.
Mathilde Gauchier, Sophie Kan, Amandine Barral, Sandrine Sauzet, Eneritz Agirre, Erin Bonnell, Nehmé Saksouk, Teresa K Barth, Satoru Ide, Serge Urbach,[...]. Sci Adv 2019
31
25


Open source clustering software.
M J L de Hoon, S Imoto, J Nolan, S Miyano. Bioinformatics 2004
25

Behaviour of telomere and telomerase during aging and regeneration in zebrafish.
Monique Anchelin, Laura Murcia, Francisca Alcaraz-Pérez, Esther M García-Navarro, María L Cayuela. PLoS One 2011
78
25

The telomeric DNA damage response occurs in the absence of chromatin decompaction.
Aleksandra Vancevska, Kyle M Douglass, Verena Pfeiffer, Suliana Manley, Joachim Lingner. Genes Dev 2017
28
25

Antitelomerase therapy provokes ALT and mitochondrial adaptive mechanisms in cancer.
Jian Hu, Soyoon Sarah Hwang, Marc Liesa, Boyi Gan, Ergun Sahin, Mariela Jaskelioff, Zhihu Ding, Haoqiang Ying, Adam T Boutin, Hailei Zhang,[...]. Cell 2012
180
25

The DDR at telomeres lacking intact shelterin does not require substantial chromatin decompaction.
Leonid A Timashev, Hazen Babcock, Xiaowei Zhuang, Titia de Lange. Genes Dev 2017
29
25

CTCF driven TERRA transcription facilitates completion of telomere DNA replication.
Kate Beishline, Olga Vladimirova, Stephen Tutton, Zhuo Wang, Zhong Deng, Paul M Lieberman. Nat Commun 2017
34
25

Shelterin Protects Chromosome Ends by Compacting Telomeric Chromatin.
Jigar N Bandaria, Peiwu Qin, Veysel Berk, Steven Chu, Ahmet Yildiz. Cell 2016
87
25

Applications of Genomic Sequencing in Pediatric CNS Tumors.
Abhishek A Bavle, Frank Y Lin, D Williams Parsons. Oncology (Williston Park) 2016
5
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.