A citation-based method for searching scientific literature

Nalini Srinivas, Sivaramakrishna Rachakonda, Rajiv Kumar.  2020
Times Cited: 3







List of co-cited articles
8 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Non-canonical NF-κB signalling and ETS1/2 cooperatively drive C250T mutant TERT promoter activation.
Yinghui Li, Qi-Ling Zhou, Wenjie Sun, Prashant Chandrasekharan, Hui Shan Cheng, Zhe Ying, Manikandan Lakshmanan, Anandhkumar Raju, Daniel G Tenen, Shi-Yuan Cheng,[...]. Nat. Cell Biol. 2015
96
66

Allele-Specific DNA Methylation and Its Interplay with Repressive Histone Marks at Promoter-Mutant TERT Genes.
Josh Lewis Stern, Richard D Paucek, Franklin W Huang, Mahmoud Ghandi, Ronald Nwumeh, James C Costello, Thomas R Cech. Cell Rep 2017
26
66

TERT promoter mutation subtypes and survival in stage I and II melanoma patients.
Juan J Andrés-Lencina, Sivaramakrishna Rachakonda, Zaida García-Casado, Nalini Srinivas, Alexander Skorokhod, Celia Requena, Virtudes Soriano, Rajiv Kumar, Eduardo Nagore. Int. J. Cancer 2019
16
66

Cancer-associated TERT promoter mutations abrogate telomerase silencing.
Kunitoshi Chiba, Joshua Z Johnson, Jacob M Vogan, Tina Wagner, John M Boyle, Dirk Hockemeyer. Elife 2015
121
66

DNA hypermethylation within TERT promoter upregulates TERT expression in cancer.
Donghyun D Lee, Ricardo Leão, Martin Komosa, Marco Gallo, Cindy H Zhang, Tatiana Lipman, Marc Remke, Abolfazl Heidari, Nuno Miguel Nunes, Joana D Apolónio,[...]. J. Clin. Invest. 2019
32
66

Mutations in the promoter of the telomerase gene TERT contribute to tumorigenesis by a two-step mechanism.
Kunitoshi Chiba, Franziska K Lorbeer, A Hunter Shain, David T McSwiggen, Eva Schruf, Areum Oh, Jekwan Ryu, Xavier Darzacq, Boris C Bastian, Dirk Hockemeyer. Science 2017
92
66

TERT promoter mutations in familial and sporadic melanoma.
Susanne Horn, Adina Figl, P Sivaramakrishna Rachakonda, Christine Fischer, Antje Sucker, Andreas Gast, Stephanie Kadel, Iris Moll, Eduardo Nagore, Kari Hemminki,[...]. Science 2013
934
66

TERT promoter mutations in melanoma survival.
Eduardo Nagore, Barbara Heidenreich, Sívaramakrishna Rachakonda, Zaida Garcia-Casado, Celia Requena, Virtudes Soriano, Christoph Frank, Victor Traves, Esther Quecedo, Josefa Sanjuan-Gimenez,[...]. Int. J. Cancer 2016
59
66

Mutation hotspots due to sunlight in the p53 gene of nonmelanoma skin cancers.
A Ziegler, D J Leffell, S Kunala, H W Sharma, M Gailani, J A Simon, A J Halperin, H P Baden, P E Shapiro, A E Bale. Proc. Natl. Acad. Sci. U.S.A. 1993
435
33

Dph3, a small protein required for diphthamide biosynthesis, is essential in mouse development.
Shihui Liu, Jason F Wiggins, Taduru Sreenath, Ashok B Kulkarni, Jerrold M Ward, Stephen H Leppla. Mol. Cell. Biol. 2006
44
33

Mutational landscape of basal cell carcinomas by whole-exome sequencing.
Shyam S Jayaraman, David J Rayhan, Salar Hazany, Michael S Kolodney. J Invest Dermatol 2014
84
33

Structural basis for the recognition of Sonic Hedgehog by human Patched1.
Xin Gong, Hongwu Qian, Pingping Cao, Xin Zhao, Qiang Zhou, Jianlin Lei, Nieng Yan. Science 2018
58
33

PTCH mutations: distribution and analyses.
Erika Lindström, Takashi Shimokawa, Rune Toftgård, Peter G Zaphiropoulos. Hum Mutat 2006
110
33

Structure of the Kti11/Kti13 heterodimer and its double role in modifications of tRNA and eukaryotic elongation factor 2.
Sebastian Glatt, Rene Zabel, Ivana Vonkova, Amit Kumar, Daili J Netz, Antonio J Pierik, Vladimir Rybin, Roland Lill, Anne-Claude Gavin, Jochen Balbach,[...]. Structure 2015
23
33

Several human PATCHED1 mutations block protein maturation.
Evans C Bailey, Lei Zhou, Ronald L Johnson. Cancer Res 2003
8
33

Smoothened variants explain the majority of drug resistance in basal cell carcinoma.
Scott X Atwood, Kavita Y Sarin, Ramon J Whitson, Jiang R Li, Geurim Kim, Melika Rezaee, Mina S Ally, Jinah Kim, Catherine Yao, Anne Lynn S Chang,[...]. Cancer Cell 2015
166
33

QUMA: quantification tool for methylation analysis.
Yuichi Kumaki, Masaaki Oda, Masaki Okano. Nucleic Acids Res. 2008
341
33

Genomic sites hypersensitive to ultraviolet radiation.
Sanjay Premi, Lynn Han, Sameet Mehta, James Knight, Dejian Zhao, Meg A Palmatier, Karl Kornacker, Douglas E Brash. Proc. Natl. Acad. Sci. U.S.A. 2019
7
33

Human homolog of patched, a candidate gene for the basal cell nevus syndrome.
R L Johnson, A L Rothman, J Xie, L V Goodrich, J W Bare, J M Bonifas, A G Quinn, R M Myers, D R Cox, E H Epstein,[...]. Science 1996
33

Improving sequence variant descriptions in mutation databases and literature using the Mutalyzer sequence variation nomenclature checker.
Martin Wildeman, Ernest van Ophuizen, Johan T den Dunnen, Peter E M Taschner. Hum. Mutat. 2008
277
33

Genome-wide analysis of noncoding regulatory mutations in cancer.
Nils Weinhold, Anders Jacobsen, Nikolaus Schultz, Chris Sander, William Lee. Nat. Genet. 2014
259
33


p53 mutations in human aggressive and nonaggressive basal and squamous cell carcinomas.
Svetlana Bolshakov, Christopher M Walker, Sara S Strom, Mano S Selvan, Gary L Clayman, Adel El-Naggar, Scott M Lippman, Margaret L Kripke, Honnavara N Ananthaswamy. Clin. Cancer Res. 2003
70
33

Mesenchymal and MAPK Expression Signatures Associate with Telomerase Promoter Mutations in Multiple Cancers.
Josh Lewis Stern, Grace Hibshman, Kevin Hu, Sarah E Ferrara, James C Costello, William Kim, Pablo Tamayo, Thomas R Cech, Franklin W Huang. Mol Cancer Res 2020
3
33

Understanding the Molecular Genetics of Basal Cell Carcinoma.
Cristina Pellegrini, Maria Giovanna Maturo, Lucia Di Nardo, Valeria Ciciarelli, Carlota Gutiérrez García-Rodrigo, Maria Concetta Fargnoli. Int J Mol Sci 2017
40
33

TERT promoter mutations in skin cancer: the effects of sun exposure and X-irradiation.
Helena Pópulo, Paula Boaventura, João Vinagre, Rui Batista, Adélia Mendes, Regina Caldas, Joana Pardal, Filomena Azevedo, Mrinalini Honavar, Isabel Guimarães,[...]. J. Invest. Dermatol. 2014
62
33

Protter: interactive protein feature visualization and integration with experimental proteomic data.
Ulrich Omasits, Christian H Ahrens, Sebastian Müller, Bernd Wollscheid. Bioinformatics 2014
401
33

Diagnosis and treatment of basal cell carcinoma: European consensus-based interdisciplinary guidelines.
Ketty Peris, Maria Concetta Fargnoli, Claus Garbe, Roland Kaufmann, Lars Bastholt, Nicole Basset Seguin, Veronique Bataille, Veronique Del Marmol, Reinhard Dummer, Catherine A Harwood,[...]. Eur J Cancer 2019
29
33

Structural basis for reactivating the mutant TERT promoter by cooperative binding of p52 and ETS1.
Xueyong Xu, Yinghui Li, Sakshibeedu R Bharath, Mert Burak Ozturk, Matthew W Bowler, Bryan Zong Lin Loo, Vinay Tergaonkar, Haiwei Song. Nat Commun 2018
13
33

Identification of the cell lineage at the origin of basal cell carcinoma.
Khalil Kass Youssef, Alexandra Van Keymeulen, Gäelle Lapouge, Benjamin Beck, Cindy Michaux, Younes Achouri, Panagiota A Sotiropoulou, Cédric Blanpain. Nat. Cell Biol. 2010
234
33

The first 30 years of p53: growing ever more complex.
Arnold J Levine, Moshe Oren. Nat Rev Cancer 2009
951
33

TERT promoter mutations in telomere biology.
Barbara Heidenreich, Rajiv Kumar. Mutat. Res. 2017
55
33

Frequent clones of p53-mutated keratinocytes in normal human skin.
A S Jonason, S Kunala, G J Price, R J Restifo, H M Spinelli, J A Persing, D J Leffell, R E Tarone, D E Brash. Proc. Natl. Acad. Sci. U.S.A. 1996
382
33

Relationship between sunlight exposure and a key genetic alteration in basal cell carcinoma.
M R Gailani, D J Leffell, A Ziegler, E G Gross, D E Brash, A E Bale. J. Natl. Cancer Inst. 1996
104
33

Telomere length, arsenic exposure and risk of basal cell carcinoma of skin.
Nalini Srinivas, Sivaramakrishna Rachakonda, Thomas Hielscher, Silvia Calderazzo, Peter Rudnai, Eugen Gurzau, Kvetoslava Koppova, Tony Fletcher, Rajiv Kumar. Carcinogenesis 2019
3
33

Dph3 is an electron donor for Dph1-Dph2 in the first step of eukaryotic diphthamide biosynthesis.
Min Dong, Xiaoyang Su, Boris Dzikovski, Emily E Dando, Xuling Zhu, Jintang Du, Jack H Freed, Hening Lin. J. Am. Chem. Soc. 2014
35
33

Somatic mutations in the PTCH, SMOH, SUFUH and TP53 genes in sporadic basal cell carcinomas.
J Reifenberger, M Wolter, C B Knobbe, B Köhler, A Schönicke, C Scharwächter, K Kumar, B Blaschke, T Ruzicka, G Reifenberger. Br J Dermatol 2005
227
33

Several PATCHED1 missense mutations display activity in patched1-deficient fibroblasts.
Evans C Bailey, Ljiljana Milenkovic, Matthew P Scott, James F Collawn, Ronald L Johnson. J Biol Chem 2002
27
33

Mutation of the TERT promoter, switch to active chromatin, and monoallelic TERT expression in multiple cancers.
Josh Lewis Stern, Dan Theodorescu, Bert Vogelstein, Nickolas Papadopoulos, Thomas R Cech. Genes Dev. 2015
78
33

TERT promoter mutations and telomere length in adult malignant gliomas and recurrences.
Barbara Heidenreich, P Sivaramakrishna Rachakonda, Ismail Hosen, Florian Volz, Kari Hemminki, Astrid Weyerbrock, Rajiv Kumar. Oncotarget 2015
45
33

Basal cell carcinomas: attack of the hedgehog.
Ervin H Epstein. Nat Rev Cancer 2008
436
33

Frequent DPH3 promoter mutations in skin cancers.
Evgeniya Denisova, Barbara Heidenreich, Eduardo Nagore, P Sivaramakrishna Rachakonda, Ismail Hosen, Ivana Akrap, Víctor Traves, Zaida García-Casado, José Antonio López-Guerrero, Celia Requena,[...]. Oncotarget 2015
29
33

Basal cell carcinomas arise from hair follicle stem cells in Ptch1(+/-) mice.
Grace Ying Wang, Joy Wang, Maria-Laura Mancianti, Ervin H Epstein. Cancer Cell 2011
130
33

TP53 mutations in human skin cancers.
Giuseppina Giglia-Mari, Alain Sarasin. Hum Mutat 2003
153
33

A prospective study of telomere length measured by monochrome multiplex quantitative PCR and risk of lung cancer.
Min Shen, Richard Cawthon, Nathaniel Rothman, Stephanie J Weinstein, Jarmo Virtamo, H Dean Hosgood, Wei Hu, Unhee Lim, Demetrius Albanes, Qing Lan. Lung Cancer 2011
62
33

MethPrimer: designing primers for methylation PCRs.
Long-Cheng Li, Rajvir Dahiya. Bioinformatics 2002
33


Genomic analysis identifies new drivers and progression pathways in skin basal cell carcinoma.
Ximena Bonilla, Laurent Parmentier, Bryan King, Fedor Bezrukov, Gürkan Kaya, Vincent Zoete, Vladimir B Seplyarskiy, Hayley J Sharpe, Thomas McKee, Audrey Letourneau,[...]. Nat Genet 2016
133
33

Silencing of diphthamide synthesis 3 (Dph3) reduces metastasis of murine melanoma.
Lei Wang, Yu Shi, Peijun Ju, Rui Liu, Siok Ping Yeo, Yinyan Xia, Hamed Owlanj, Zhiwei Feng. PLoS ONE 2012
13
33

TERT promoter mutations are frequent in cutaneous basal cell carcinoma and squamous cell carcinoma.
Klaus G Griewank, Rajmohan Murali, Bastian Schilling, Tobias Schimming, Inga Möller, Iris Moll, Marion Schwamborn, Antje Sucker, Lisa Zimmer, Dirk Schadendorf,[...]. PLoS ONE 2013
45
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.