A citation-based method for searching scientific literature

Rongwen Lu, Yajie Liang, Guanghan Meng, Pengcheng Zhou, Karel Svoboda, Liam Paninski, Na Ji. Nat Methods 2020
Times Cited: 48







List of co-cited articles
606 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
39

A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging.
Nicholas James Sofroniew, Daniel Flickinger, Jonathan King, Karel Svoboda. Elife 2016
272
33

Kilohertz two-photon fluorescence microscopy imaging of neural activity in vivo.
Jianglai Wu, Yajie Liang, Shuo Chen, Ching-Lung Hsu, Mariya Chavarha, Stephen W Evans, Dongqing Shi, Michael Z Lin, Kevin K Tsia, Na Ji. Nat Methods 2020
68
29

Two-photon laser scanning fluorescence microscopy.
W Denk, J H Strickler, W W Webb. Science 1990
29

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.
Hod Dana, Yi Sun, Boaz Mohar, Brad K Hulse, Aaron M Kerlin, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel,[...]. Nat Methods 2019
369
27

Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
332
18

Wide field-of-view, multi-region, two-photon imaging of neuronal activity in the mammalian brain.
Jeffrey N Stirman, Ikuko T Smith, Michael W Kudenov, Spencer L Smith. Nat Biotechnol 2016
156
18

Simultaneous multiplane imaging with reverberation two-photon microscopy.
Devin R Beaulieu, Ian G Davison, Kıvılcım Kılıç, Thomas G Bifano, Jerome Mertz. Nat Methods 2020
36
25

A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality.
Tanya L Daigle, Linda Madisen, Travis A Hage, Matthew T Valley, Ulf Knoblich, Rylan S Larsen, Marc M Takeno, Lawrence Huang, Hong Gu, Rachael Larsen,[...]. Cell 2018
275
16

Video-rate volumetric functional imaging of the brain at synaptic resolution.
Rongwen Lu, Wenzhi Sun, Yajie Liang, Aaron Kerlin, Jens Bierfeld, Johannes D Seelig, Daniel E Wilson, Benjamin Scholl, Boaz Mohar, Masashi Tanimoto,[...]. Nat Neurosci 2017
120
16

Swept confocally-aligned planar excitation (SCAPE) microscopy for high speed volumetric imaging of behaving organisms.
Matthew B Bouchard, Venkatakaushik Voleti, César S Mendes, Clay Lacefield, Wesley B Grueber, Richard S Mann, Randy M Bruno, Elizabeth M C Hillman. Nat Photonics 2015
255
16

Simultaneous two-photon calcium imaging at different depths with spatiotemporal multiplexing.
Adrian Cheng, J Tiago Gonçalves, Peyman Golshani, Katsushi Arisaka, Carlos Portera-Cailliau. Nat Methods 2011
157
16

Volumetric Ca2+ Imaging in the Mouse Brain Using Hybrid Multiplexed Sculpted Light Microscopy.
Siegfried Weisenburger, Frank Tejera, Jeffrey Demas, Brandon Chen, Jason Manley, Fraser T Sparks, Francisca Martínez Traub, Tanya Daigle, Hongkui Zeng, Attila Losonczy,[...]. Cell 2019
71
16

Fundamental bounds on the fidelity of sensory cortical coding.
Oleg I Rumyantsev, Jérôme A Lecoq, Oscar Hernandez, Yanping Zhang, Joan Savall, Radosław Chrapkiewicz, Jane Li, Hongkui Zeng, Surya Ganguli, Mark J Schnitzer. Nature 2020
59
16

Deep tissue two-photon microscopy.
Fritjof Helmchen, Winfried Denk. Nat Methods 2005
16

Ultrafast Two-Photon Imaging of a High-Gain Voltage Indicator in Awake Behaving Mice.
Vincent Villette, Mariya Chavarha, Ivan K Dimov, Jonathan Bradley, Lagnajeet Pradhan, Benjamin Mathieu, Stephen W Evans, Simon Chamberland, Dongqing Shi, Renzhi Yang,[...]. Cell 2019
122
14

In vivo three-photon microscopy of subcortical structures within an intact mouse brain.
Nicholas G Horton, Ke Wang, Demirhan Kobat, Catharine G Clark, Frank W Wise, Chris B Schaffer, Chris Xu. Nat Photonics 2013
591
14

Miniaturized integration of a fluorescence microscope.
Kunal K Ghosh, Laurie D Burns, Eric D Cocker, Axel Nimmerjahn, Yaniv Ziv, Abbas El Gamal, Mark J Schnitzer. Nat Methods 2011
539
14

Single-trial neural dynamics are dominated by richly varied movements.
Simon Musall, Matthew T Kaufman, Ashley L Juavinett, Steven Gluf, Anne K Churchland. Nat Neurosci 2019
273
14

Kilohertz frame-rate two-photon tomography.
Abbas Kazemipour, Ondrej Novak, Daniel Flickinger, Jonathan S Marvin, Ahmed S Abdelfattah, Jonathan King, Philip M Borden, Jeong Jun Kim, Sarah H Al-Abdullatif, Parker E Deal,[...]. Nat Methods 2019
64
14

Global Representations of Goal-Directed Behavior in Distinct Cell Types of Mouse Neocortex.
William E Allen, Isaac V Kauvar, Michael Z Chen, Ethan B Richman, Samuel J Yang, Ken Chan, Viviana Gradinaru, Benjamin E Deverman, Liqun Luo, Karl Deisseroth. Neuron 2017
173
14

Imaging Cortical Dynamics in GCaMP Transgenic Rats with a Head-Mounted Widefield Macroscope.
Benjamin B Scott, Stephan Y Thiberge, Caiying Guo, D Gowanlock R Tervo, Carlos D Brody, Alla Y Karpova, David W Tank. Neuron 2018
63
14


Diesel2p mesoscope with dual independent scan engines for flexible capture of dynamics in distributed neural circuitry.
Che-Hang Yu, Jeffrey N Stirman, Yiyi Yu, Riichiro Hira, Spencer L Smith. Nat Commun 2021
23
30

Rational Engineering of XCaMPs, a Multicolor GECI Suite for In Vivo Imaging of Complex Brain Circuit Dynamics.
Masatoshi Inoue, Atsuya Takeuchi, Satoshi Manita, Shin-Ichiro Horigane, Masayuki Sakamoto, Ryosuke Kawakami, Kazushi Yamaguchi, Kouhei Otomo, Hiroyuki Yokoyama, Ryang Kim,[...]. Cell 2019
110
12

Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
12

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
12

Fully integrated silicon probes for high-density recording of neural activity.
James J Jun, Nicholas A Steinmetz, Joshua H Siegle, Daniel J Denman, Marius Bauza, Brian Barbarits, Albert K Lee, Costas A Anastassiou, Alexandru Andrei, Çağatay Aydın,[...]. Nature 2017
687
12

Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator.
Or A Shemesh, Changyang Linghu, Kiryl D Piatkevich, Daniel Goodwin, Orhan Tunc Celiker, Howard J Gritton, Michael F Romano, Ruixuan Gao, Chih-Chieh Jay Yu, Hua-An Tseng,[...]. Neuron 2020
32
18

Population imaging of neural activity in awake behaving mice.
Kiryl D Piatkevich, Seth Bensussen, Hua-An Tseng, Sanaya N Shroff, Violeta Gisselle Lopez-Huerta, Demian Park, Erica E Jung, Or A Shemesh, Christoph Straub, Howard J Gritton,[...]. Nature 2019
102
12

Distributed coding of choice, action and engagement across the mouse brain.
Nicholas A Steinmetz, Peter Zatka-Haas, Matteo Carandini, Kenneth D Harris. Nature 2019
208
12

Real-time volumetric microscopy of in vivo dynamics and large-scale samples with SCAPE 2.0.
Venkatakaushik Voleti, Kripa B Patel, Wenze Li, Citlali Perez Campos, Srinidhi Bharadwaj, Hang Yu, Caitlin Ford, Malte J Casper, Richard Wenwei Yan, Wenxuan Liang,[...]. Nat Methods 2019
94
12

Fast high-resolution miniature two-photon microscopy for brain imaging in freely behaving mice.
Weijian Zong, Runlong Wu, Mingli Li, Yanhui Hu, Yijun Li, Jinghang Li, Hao Rong, Haitao Wu, Yangyang Xu, Yang Lu,[...]. Nat Methods 2017
197
12

In vivo three-photon imaging of activity of GCaMP6-labeled neurons deep in intact mouse brain.
Dimitre G Ouzounov, Tianyu Wang, Mengran Wang, Danielle D Feng, Nicholas G Horton, Jean C Cruz-Hernández, Yu-Ting Cheng, Jacob Reimer, Andreas S Tolias, Nozomi Nishimura,[...]. Nat Methods 2017
222
12

Quantitative analysis of 1300-nm three-photon calcium imaging in the mouse brain.
Tianyu Wang, Chunyan Wu, Dimitre G Ouzounov, Wenchao Gu, Fei Xia, Minsu Kim, Xusan Yang, Melissa R Warden, Chris Xu. Elife 2020
39
15


In vivo imaging of neural activity.
Weijian Yang, Rafael Yuste. Nat Methods 2017
191
12

Simultaneous Multi-plane Imaging of Neural Circuits.
Weijian Yang, Jae-Eun Kang Miller, Luis Carrillo-Reid, Eftychios Pnevmatikakis, Liam Paninski, Rafael Yuste, Darcy S Peterka. Neuron 2016
122
12

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
475
12

Cortical layer-specific critical dynamics triggering perception.
James H Marshel, Yoon Seok Kim, Timothy A Machado, Sean Quirin, Brandon Benson, Jonathan Kadmon, Cephra Raja, Adelaida Chibukhchyan, Charu Ramakrishnan, Masatoshi Inoue,[...]. Science 2019
197
12

Video rate volumetric Ca2+ imaging across cortex using seeded iterative demixing (SID) microscopy.
Tobias Nöbauer, Oliver Skocek, Alejandro J Pernía-Andrade, Lukas Weilguny, Francisca Martínez Traub, Maxim I Molodtsov, Alipasha Vaziri. Nat Methods 2017
56
12

Volumetric two-photon imaging of neurons using stereoscopy (vTwINS).
Alexander Song, Adam S Charles, Sue Ann Koay, Jeff L Gauthier, Stephan Y Thiberge, Jonathan W Pillow, David W Tank. Nat Methods 2017
61
12

Simultaneous cortex-wide fluorescence Ca2+ imaging and whole-brain fMRI.
Evelyn M R Lake, Xinxin Ge, Xilin Shen, Peter Herman, Fahmeed Hyder, Jessica A Cardin, Michael J Higley, Dustin Scheinost, Xenophon Papademetris, Michael C Crair,[...]. Nat Methods 2020
50
12

Technologies for imaging neural activity in large volumes.
Na Ji, Jeremy Freeman, Spencer L Smith. Nat Neurosci 2016
128
12

Spontaneous behaviors drive multidimensional, brainwide activity.
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
399
12

Wave optics theory and 3-D deconvolution for the light field microscope.
Michael Broxton, Logan Grosenick, Samuel Yang, Noy Cohen, Aaron Andalman, Karl Deisseroth, Marc Levoy. Opt Express 2013
165
12

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.
Robert Prevedel, Young-Gyu Yoon, Maximilian Hoffmann, Nikita Pak, Gordon Wetzstein, Saul Kato, Tina Schrödel, Ramesh Raskar, Manuel Zimmer, Edward S Boyden,[...]. Nat Methods 2014
325
12

Ultra-large field-of-view two-photon microscopy.
Philbert S Tsai, Celine Mateo, Jeffrey J Field, Chris B Schaffer, Matthew E Anderson, David Kleinfeld. Opt Express 2015
62
12

Fast, cell-resolution, contiguous-wide two-photon imaging to reveal functional network architectures across multi-modal cortical areas.
Keisuke Ota, Yasuhiro Oisi, Takayuki Suzuki, Muneki Ikeda, Yoshiki Ito, Tsubasa Ito, Hiroyuki Uwamori, Kenta Kobayashi, Midori Kobayashi, Maya Odagawa,[...]. Neuron 2021
26
23

High-speed, cortex-wide volumetric recording of neuroactivity at cellular resolution using light beads microscopy.
Jeffrey Demas, Jason Manley, Frank Tejera, Kevin Barber, Hyewon Kim, Francisca Martínez Traub, Brandon Chen, Alipasha Vaziri. Nat Methods 2021
35
17


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.