A citation-based method for searching scientific literature

Ľubomír Tomáška, Jozef Nosek. J Mol Evol 2020
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Organization of DNA in Mammalian Mitochondria.
Géraldine Farge, Maria Falkenberg. Int J Mol Sci 2019
24
100

Yeast aconitase binds and provides metabolically coupled protection to mitochondrial DNA.
Xin Jie Chen, Xiaowen Wang, Ronald A Butow. Proc Natl Acad Sci U S A 2007
64
100

Mitochondrial transcription factor A contributes to cisplatin resistance in patients with estrogen receptor‑positive breast cancer.
Wei Gao, Mei-Hong Wu, Ning Wang, Ming-Zheng Ying, Ying-Yi Zhang, Jing Hua, Liu Chuan, Ya-Jie Wang. Mol Med Rep 2016
4
100

Asymmetric inheritance of mitochondria in yeast.
Till Klecker, Benedikt Westermann. Biol Chem 2020
2
100


Damage to mtDNA in liver injury of patients with extrahepatic cholestasis: the protective effects of mitochondrial transcription factor A.
Shang-Cheng Xu, Yong-Biao Chen, Heng Lin, Hui-Feng Pi, Ni-Xian Zhang, Chang-Chun Zhao, Ling Shuai, Min Zhong, Zheng-Ping Yu, Zhou Zhou,[...]. Free Radic Biol Med 2012
21
100

Overexpression of TFAM or twinkle increases mtDNA copy number and facilitates cardioprotection associated with limited mitochondrial oxidative stress.
Masataka Ikeda, Tomomi Ide, Takeo Fujino, Shinobu Arai, Keita Saku, Takamori Kakino, Henna Tyynismaa, Toshihide Yamasaki, Ken-Ichi Yamada, Dongchon Kang,[...]. PLoS One 2015
69
100


Maintenance and Expression of Mammalian Mitochondrial DNA.
Claes M Gustafsson, Maria Falkenberg, Nils-Göran Larsson. Annu Rev Biochem 2016
243
100

Isolation of the mitochondrial nucleoids from yeast Kluyveromyces lactis and analyses of the nucleoid proteins.
Isamu Miyakawa, Hiroshi Sato, Yukari Maruyama, Tomoko Nakaoka. J Gen Appl Microbiol 2003
10
100

A data set of human endogenous protein ubiquitination sites.
Yi Shi, Doug W Chan, Sung Yun Jung, Anna Malovannaya, Yi Wang, Jun Qin. Mol Cell Proteomics 2011
69
100

Human heart mitochondrial DNA is organized in complex catenated networks containing abundant four-way junctions and replication forks.
Jaakko L O Pohjoismäki, Steffi Goffart, Henna Tyynismaa, Smaranda Willcox, Tomomi Ide, Dongchon Kang, Anu Suomalainen, Pekka J Karhunen, Jack D Griffith, Ian J Holt,[...]. J Biol Chem 2009
82
100

Phosphorylation of human TFAM in mitochondria impairs DNA binding and promotes degradation by the AAA+ Lon protease.
Bin Lu, Jae Lee, Xiaobo Nie, Min Li, Yaroslav I Morozov, Sundararajan Venkatesh, Daniel F Bogenhagen, Dmitry Temiakov, Carolyn K Suzuki. Mol Cell 2013
166
100

Vascular smooth muscle cell proliferation is dependent upon upregulation of mitochondrial transcription factor A (mtTFA) expression in injured rat carotid artery.
Tomonori Yoshida, Hiroyuki Azuma, Ken-ichi Aihara, Mitsunori Fujimura, Masashi Akaike, Takao Mitsui, Toshio Matsumoto. Atherosclerosis 2005
13
100

Hidden features: exploring the non-canonical functions of metabolic enzymes.
Peiwei Huangyang, M Celeste Simon. Dis Model Mech 2018
20
100

Downregulation of TFAM inhibits the tumorigenesis of non-small cell lung cancer by activating ROS-mediated JNK/p38MAPK signaling and reducing cellular bioenergetics.
Deyao Xie, Xiaoyi Wu, Linhua Lan, Fugeng Shangguan, Xiaoming Lin, Fuhong Chen, Shan Xu, Ya Zhang, Zilei Chen, Kate Huang,[...]. Oncotarget 2016
37
100


ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Akihisa Matsuyama, Ritsuko Arai, Yoko Yashiroda, Atsuko Shirai, Ayako Kamata, Shigeko Sekido, Yumiko Kobayashi, Atsushi Hashimoto, Makiko Hamamoto, Yasushi Hiraoka,[...]. Nat Biotechnol 2006
427
100




The Role of Exercise and TFAM in Preventing Skeletal Muscle Atrophy.
Nicholas T Theilen, George H Kunkel, Suresh C Tyagi. J Cell Physiol 2017
46
100


Impaired insulin secretion and beta-cell loss in tissue-specific knockout mice with mitochondrial diabetes.
J P Silva, M Köhler, C Graff, A Oldfors, M A Magnuson, P O Berggren, N G Larsson. Nat Genet 2000
315
100

DNA packaging proteins Glom and Glom2 coordinately organize the mitochondrial nucleoid of Physarum polycephalum.
Kie Itoh, Akiko Izumi, Toshiyuki Mori, Naoshi Dohmae, Ryoko Yui, Katsura Maeda-Sano, Yuki Shirai, Masahiro M Kanaoka, Tsuneyoshi Kuroiwa, Tetsuya Higashiyama,[...]. Mitochondrion 2011
11
100

4
100

Composition and dynamics of human mitochondrial nucleoids.
Nuria Garrido, Lorena Griparic, Eija Jokitalo, Jorma Wartiovaara, Alexander M van der Bliek, Johannes N Spelbrink. Mol Biol Cell 2003
242
100

Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
Peter Henriksen, Sebastian A Wagner, Brian T Weinert, Satyan Sharma, Giedre Bacinskaja, Michael Rehman, André H Juffer, Tobias C Walther, Michael Lisby, Chunaram Choudhary. Mol Cell Proteomics 2012
180
100


The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis.
Boris Macek, Ivan Mijakovic, Jesper V Olsen, Florian Gnad, Chanchal Kumar, Peter R Jensen, Matthias Mann. Mol Cell Proteomics 2007
296
100

Mitochondrial biogenesis fails in secondary biliary cirrhosis in rats leading to mitochondrial DNA depletion and deletions.
Alessandro Arduini, Gaetano Serviddio, Javier Escobar, Ana M Tormos, Francesco Bellanti, José Viña, María Monsalve, Juan Sastre. Am J Physiol Gastrointest Liver Physiol 2011
34
100


Role of mitochondria in diabetic peripheral neuropathy: Influencing the NAD+-dependent SIRT1-PGC-1α-TFAM pathway.
Krish Chandrasekaran, Muragundla Anjaneyulu, Joungil Choi, Pranith Kumar, Mohammad Salimian, Cheng-Ying Ho, James W Russell. Int Rev Neurobiol 2019
28
100


Impact of Chromosomal Architecture on the Function and Evolution of Bacterial Genomes.
Thøger J Krogh, Jakob Møller-Jensen, Christoph Kaleta. Front Microbiol 2018
18
100

Organelle nuclei in higher plants: structure, composition, function, and evolution.
Atsushi Sakai, Hiroyoshi Takano, Tsuneyoshi Kuroiwa. Int Rev Cytol 2004
63
100


Mitochondrial transcription factor A is necessary for mtDNA maintenance and embryogenesis in mice.
N G Larsson, J Wang, H Wilhelmsson, A Oldfors, P Rustin, M Lewandoski, G S Barsh, D A Clayton. Nat Genet 1998
100

Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
100

Early transcriptional deregulation of hepatic mitochondrial biogenesis and its consequent effects on murine cholestatic liver injury.
Mao-Meng Tiao, Tsu-Kung Lin, Cha-Wei Liou, Pei-Wen Wang, Jin-Bor Chen, Fang-Ying Kuo, Chao-Cheng Huang, Yao-Min Chou, Jiin-Haur Chuang. Apoptosis 2009
29
100

Synchronized mitochondrial and cytosolic translation programs.
Mary T Couvillion, Iliana C Soto, Gergana Shipkovenska, L Stirling Churchman. Nature 2016
141
100


The mtDNA replication-related genes TFAM and POLG are associated with leprosy in Han Chinese from Southwest China.
Dong Wang, Guo-Dong Li, Yu Fan, Deng-Feng Zhang, Rui Bi, Xiu-Feng Yu, Heng Long, Yu-Ye Li, Yong-Gang Yao. J Dermatol Sci 2017
4
100


Dietary isoflavone daidzein promotes Tfam expression that increases mitochondrial biogenesis in C2C12 muscle cells.
Makiko Yoshino, Ayano Naka, Yuri Sakamoto, Ayako Shibasaki, Mariko Toh, Sakuka Tsukamoto, Kazuo Kondo, Kaoruko Iida. J Nutr Biochem 2015
19
100

Binding of human mitochondrial transcription factor A, an HMG box protein, to a four-way DNA junction.
T Ohno, S Umeda, N Hamasaki, D Kang. Biochem Biophys Res Commun 2000
49
100



Morphology and protein composition of the mitochondrial nucleoids in yeast cells lacking Abf2p, a high mobility group protein.
Isamu Miyakawa, Miwako Kanayama, Yuka Fujita, Hiroshi Sato. J Gen Appl Microbiol 2010
13
100

Increased mtDNA copy number promotes cancer progression by enhancing mitochondrial oxidative phosphorylation in microsatellite-stable colorectal cancer.
Xiacheng Sun, Lei Zhan, Yibing Chen, Gang Wang, Linjie He, Qian Wang, Feng Zhou, Fang Yang, Jin Wu, Yousheng Wu,[...]. Signal Transduct Target Ther 2018
25
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.