A citation-based method for searching scientific literature

Camilla Calandrini, Frans Schutgens, Rurika Oka, Thanasis Margaritis, Tito Candelli, Luka Mathijsen, Carola Ammerlaan, Ravian L van Ineveld, Sepide Derakhshan, Sanne de Haan, Emmy Dolman, Philip Lijnzaad, Lars Custers, Harry Begthel, Hindrik H D Kerstens, Lindy L Visser, Maarten Rookmaaker, Marianne Verhaar, Godelieve A M Tytgat, Patrick Kemmeren, Ronald R de Krijger, Reem Al-Saadi, Kathy Pritchard-Jones, Marcel Kool, Anne C Rios, Marry M van den Heuvel-Eibrink, Jan J Molenaar, Ruben van Boxtel, Frank C P Holstege, Hans Clevers, Jarno Drost. Nat Commun 2020
Times Cited: 95







List of co-cited articles
1098 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A Living Biobank of Breast Cancer Organoids Captures Disease Heterogeneity.
Norman Sachs, Joep de Ligt, Oded Kopper, Ewa Gogola, Gergana Bounova, Fleur Weeber, Anjali Vanita Balgobind, Karin Wind, Ana Gracanin, Harry Begthel,[...]. Cell 2018
656
48

Prospective derivation of a living organoid biobank of colorectal cancer patients.
Marc van de Wetering, Hayley E Francies, Joshua M Francis, Gergana Bounova, Francesco Iorio, Apollo Pronk, Winan van Houdt, Joost van Gorp, Amaro Taylor-Weiner, Lennart Kester,[...]. Cell 2015
45

Patient-derived organoids model treatment response of metastatic gastrointestinal cancers.
Georgios Vlachogiannis, Somaieh Hedayat, Alexandra Vatsiou, Yann Jamin, Javier Fernández-Mateos, Khurum Khan, Andrea Lampis, Katherine Eason, Ian Huntingford, Rosemary Burke,[...]. Science 2018
709
37

Organoids in cancer research.
Jarno Drost, Hans Clevers. Nat Rev Cancer 2018
582
36

Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche.
Toshiro Sato, Robert G Vries, Hugo J Snippert, Marc van de Wetering, Nick Barker, Daniel E Stange, Johan H van Es, Arie Abo, Pekka Kujala, Peter J Peters,[...]. Nature 2009
34

Human primary liver cancer-derived organoid cultures for disease modeling and drug screening.
Laura Broutier, Gianmarco Mastrogiovanni, Monique Ma Verstegen, Hayley E Francies, Lena Morrill Gavarró, Charles R Bradshaw, George E Allen, Robert Arnes-Benito, Olga Sidorova, Marcia P Gaspersz,[...]. Nat Med 2017
506
34

Organoid Profiling Identifies Common Responders to Chemotherapy in Pancreatic Cancer.
Hervé Tiriac, Pascal Belleau, Dannielle D Engle, Dennis Plenker, Astrid Deschênes, Tim D D Somerville, Fieke E M Froeling, Richard A Burkhart, Robert E Denroche, Gun-Ho Jang,[...]. Cancer Discov 2018
391
33

A Comprehensive Human Gastric Cancer Organoid Biobank Captures Tumor Subtype Heterogeneity and Enables Therapeutic Screening.
Helen H N Yan, Hoi Cheong Siu, Simon Law, Siu Lun Ho, Sarah S K Yue, Wai Yin Tsui, Dessy Chan, April S Chan, Stephanie Ma, Ka On Lam,[...]. Cell Stem Cell 2018
242
33

Organoid cultures derived from patients with advanced prostate cancer.
Dong Gao, Ian Vela, Andrea Sboner, Phillip J Iaquinta, Wouter R Karthaus, Anuradha Gopalan, Catherine Dowling, Jackline N Wanjala, Eva A Undvall, Vivek K Arora,[...]. Cell 2014
798
33


Organoid Modeling of the Tumor Immune Microenvironment.
James T Neal, Xingnan Li, Junjie Zhu, Valeria Giangarra, Caitlin L Grzeskowiak, Jihang Ju, Iris H Liu, Shin-Heng Chiou, Ameen A Salahudeen, Amber R Smith,[...]. Cell 2018
472
32

Tumor Evolution and Drug Response in Patient-Derived Organoid Models of Bladder Cancer.
Suk Hyung Lee, Wenhuo Hu, Justin T Matulay, Mark V Silva, Tomasz B Owczarek, Kwanghee Kim, Chee Wai Chua, LaMont J Barlow, Cyriac Kandoth, Alanna B Williams,[...]. Cell 2018
305
30

An organoid platform for ovarian cancer captures intra- and interpatient heterogeneity.
Oded Kopper, Chris J de Witte, Kadi Lõhmussaar, Jose Espejo Valle-Inclan, Nizar Hami, Lennart Kester, Anjali Vanita Balgobind, Jeroen Korving, Natalie Proost, Harry Begthel,[...]. Nat Med 2019
263
30

A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity.
Fadi Jacob, Ryan D Salinas, Daniel Y Zhang, Phuong T T Nguyen, Jordan G Schnoll, Samuel Zheng Hao Wong, Radhika Thokala, Saad Sheikh, Deeksha Saxena, Stefan Prokop,[...]. Cell 2020
245
28

Long-term expansion of epithelial organoids from human colon, adenoma, adenocarcinoma, and Barrett's epithelium.
Toshiro Sato, Daniel E Stange, Marc Ferrante, Robert G J Vries, Johan H Van Es, Stieneke Van den Brink, Winan J Van Houdt, Apollo Pronk, Joost Van Gorp, Peter D Siersema,[...]. Gastroenterology 2011
28

Organoid models of human and mouse ductal pancreatic cancer.
Sylvia F Boj, Chang-Il Hwang, Lindsey A Baker, Iok In Christine Chio, Dannielle D Engle, Vincenzo Corbo, Myrthe Jager, Mariano Ponz-Sarvise, Hervé Tiriac, Mona S Spector,[...]. Cell 2015
28

Patient-Derived Organoids Predict Chemoradiation Responses of Locally Advanced Rectal Cancer.
Ye Yao, Xiaoya Xu, Lifeng Yang, Ji Zhu, Juefeng Wan, Lijun Shen, Fan Xia, Guoxiang Fu, Yun Deng, Mengxue Pan,[...]. Cell Stem Cell 2020
188
27

Tubuloids derived from human adult kidney and urine for personalized disease modeling.
Frans Schutgens, Maarten B Rookmaaker, Thanasis Margaritis, Anne Rios, Carola Ammerlaan, Jitske Jansen, Linda Gijzen, Marianne Vormann, Annelotte Vonk, Marco Viveen,[...]. Nat Biotechnol 2019
147
26

Patient-derived organoids can predict response to chemotherapy in metastatic colorectal cancer patients.
Salo N Ooft, Fleur Weeber, Krijn K Dijkstra, Chelsea M McLean, Sovann Kaing, Erik van Werkhoven, Luuk Schipper, Louisa Hoes, Daniel J Vis, Joris van de Haar,[...]. Sci Transl Med 2019
222
26

A rectal cancer organoid platform to study individual responses to chemoradiation.
Karuna Ganesh, Chao Wu, Kevin P O'Rourke, Bryan C Szeglin, Youyun Zheng, Charles-Etienne Gabriel Sauvé, Mohammad Adileh, Isaac Wasserman, Michael R Marco, Amanda S Kim,[...]. Nat Med 2019
163
23

Patient-derived lung cancer organoids as in vitro cancer models for therapeutic screening.
Minsuh Kim, Hyemin Mun, Chang Oak Sung, Eun Jeong Cho, Hye-Joon Jeon, Sung-Min Chun, Da Jung Jung, Tae Hoon Shin, Gi Seok Jeong, Dong Kwan Kim,[...]. Nat Commun 2019
191
23

A Colorectal Tumor Organoid Library Demonstrates Progressive Loss of Niche Factor Requirements during Tumorigenesis.
Masayuki Fujii, Mariko Shimokawa, Shoichi Date, Ai Takano, Mami Matano, Kosaku Nanki, Yuki Ohta, Kohta Toshimitsu, Yoshihiro Nakazato, Kenta Kawasaki,[...]. Cell Stem Cell 2016
389
23

Generation of Tumor-Reactive T Cells by Co-culture of Peripheral Blood Lymphocytes and Tumor Organoids.
Krijn K Dijkstra, Chiara M Cattaneo, Fleur Weeber, Myriam Chalabi, Joris van de Haar, Lorenzo F Fanchi, Maarten Slagter, Daphne L van der Velden, Sovann Kaing, Sander Kelderman,[...]. Cell 2018
367
22

Pancreatic cancer organoids recapitulate disease and allow personalized drug screening.
Else Driehuis, Arne van Hoeck, Kat Moore, Sigrid Kolders, Hayley E Francies, M Can Gulersonmez, Edwin C A Stigter, Boudewijn Burgering, Veerle Geurts, Ana Gracanin,[...]. Proc Natl Acad Sci U S A 2019
140
22

Human Pancreatic Tumor Organoids Reveal Loss of Stem Cell Niche Factor Dependence during Disease Progression.
Takashi Seino, Shintaro Kawasaki, Mariko Shimokawa, Hiroki Tamagawa, Kohta Toshimitsu, Masayuki Fujii, Yuki Ohta, Mami Matano, Kosaku Nanki, Kenta Kawasaki,[...]. Cell Stem Cell 2018
271
21

Cerebral organoids model human brain development and microcephaly.
Madeline A Lancaster, Magdalena Renner, Carol-Anne Martin, Daniel Wenzel, Louise S Bicknell, Matthew E Hurles, Tessa Homfray, Josef M Penninger, Andrew P Jackson, Juergen A Knoblich. Nature 2013
21

Modeling colorectal cancer using CRISPR-Cas9-mediated engineering of human intestinal organoids.
Mami Matano, Shoichi Date, Mariko Shimokawa, Ai Takano, Masayuki Fujii, Yuki Ohta, Toshiaki Watanabe, Takanori Kanai, Toshiro Sato. Nat Med 2015
609
20

Sequential cancer mutations in cultured human intestinal stem cells.
Jarno Drost, Richard H van Jaarsveld, Bas Ponsioen, Cheryl Zimberlin, Ruben van Boxtel, Arjan Buijs, Norman Sachs, René M Overmeer, G Johan Offerhaus, Harry Begthel,[...]. Nature 2015
570
20

Kidney organoids from human iPS cells contain multiple lineages and model human nephrogenesis.
Minoru Takasato, Pei X Er, Han S Chiu, Barbara Maier, Gregory J Baillie, Charles Ferguson, Robert G Parton, Ernst J Wolvetang, Matthias S Roost, Susana M Chuva de Sousa Lopes,[...]. Nature 2015
725
18

Cancer modeling meets human organoid technology.
David Tuveson, Hans Clevers. Science 2019
298
18

Organoid Models of Human Liver Cancers Derived from Tumor Needle Biopsies.
Sandro Nuciforo, Isabel Fofana, Matthias S Matter, Tanja Blumer, Diego Calabrese, Tujana Boldanova, Salvatore Piscuoglio, Stefan Wieland, Femke Ringnalda, Gerald Schwank,[...]. Cell Rep 2018
162
18

Patient-derived organoids from endometrial disease capture clinical heterogeneity and are amenable to drug screening.
Matteo Boretto, Nina Maenhoudt, Xinlong Luo, Aurélie Hennes, Bram Boeckx, Bich Bui, Ruben Heremans, Lisa Perneel, Hiroto Kobayashi, Indra Van Zundert,[...]. Nat Cell Biol 2019
150
17

Ductal pancreatic cancer modeling and drug screening using human pluripotent stem cell- and patient-derived tumor organoids.
Ling Huang, Audrey Holtzinger, Ishaan Jagan, Michael BeGora, Ines Lohse, Nicholas Ngai, Cristina Nostro, Rennian Wang, Lakshmi B Muthuswamy, Howard C Crawford,[...]. Nat Med 2015
376
17

Long-term expanding human airway organoids for disease modeling.
Norman Sachs, Angelos Papaspyropoulos, Domenique D Zomer-van Ommen, Inha Heo, Lena Böttinger, Dymph Klay, Fleur Weeber, Guizela Huelsz-Prince, Nino Iakobachvili, Gimano D Amatngalim,[...]. EMBO J 2019
318
17

Preserved genetic diversity in organoids cultured from biopsies of human colorectal cancer metastases.
Fleur Weeber, Marc van de Wetering, Marlous Hoogstraat, Krijn K Dijkstra, Oscar Krijgsman, Thomas Kuilman, Christa G M Gadellaa-van Hooijdonk, Daphne L van der Velden, Daniel S Peeper, Edwin P J G Cuppen,[...]. Proc Natl Acad Sci U S A 2015
243
17

Oral Mucosal Organoids as a Potential Platform for Personalized Cancer Therapy.
Else Driehuis, Sigrid Kolders, Sacha Spelier, Kadi Lõhmussaar, Stefan M Willems, Lot A Devriese, Remco de Bree, Emma J de Ruiter, Jeroen Korving, Harry Begthel,[...]. Cancer Discov 2019
120
16

Long-Term Expansion of Functional Mouse and Human Hepatocytes as 3D Organoids.
Huili Hu, Helmuth Gehart, Benedetta Artegiani, Carmen LÖpez-Iglesias, Florijn Dekkers, Onur Basak, Johan van Es, Susana M Chuva de Sousa Lopes, Harry Begthel, Jeroen Korving,[...]. Cell 2018
258
15

Long-term culture of genome-stable bipotent stem cells from adult human liver.
Meritxell Huch, Helmuth Gehart, Ruben van Boxtel, Karien Hamer, Francis Blokzijl, Monique M A Verstegen, Ewa Ellis, Martien van Wenum, Sabine A Fuchs, Joep de Ligt,[...]. Cell 2015
760
15

Molecular dissection of colorectal cancer in pre-clinical models identifies biomarkers predicting sensitivity to EGFR inhibitors.
Moritz Schütte, Thomas Risch, Nilofar Abdavi-Azar, Karsten Boehnke, Dirk Schumacher, Marlen Keil, Reha Yildiriman, Christine Jandrasits, Tatiana Borodina, Vyacheslav Amstislavskiy,[...]. Nat Commun 2017
178
15

Organoid cultures recapitulate esophageal adenocarcinoma heterogeneity providing a model for clonality studies and precision therapeutics.
Xiaodun Li, Hayley E Francies, Maria Secrier, Juliane Perner, Ahmad Miremadi, Núria Galeano-Dalmau, William J Barendt, Laura Letchford, Genevieve M Leyden, Emma K Goffin,[...]. Nat Commun 2018
116
14

Identification of multipotent luminal progenitor cells in human prostate organoid cultures.
Wouter R Karthaus, Phillip J Iaquinta, Jarno Drost, Ana Gracanin, Ruben van Boxtel, John Wongvipat, Catherine M Dowling, Dong Gao, Harry Begthel, Norman Sachs,[...]. Cell 2014
407
14

Divergent Routes toward Wnt and R-spondin Niche Independency during Human Gastric Carcinogenesis.
Kosaku Nanki, Kohta Toshimitsu, Ai Takano, Masayuki Fujii, Mariko Shimokawa, Yuki Ohta, Mami Matano, Takashi Seino, Shingo Nishikori, Keiko Ishikawa,[...]. Cell 2018
136
14

Mouse and human urothelial cancer organoids: A tool for bladder cancer research.
Jasper Mullenders, Evelien de Jongh, Anneta Brousali, Mieke Roosen, Jan P A Blom, Harry Begthel, Jeroen Korving, Trudy Jonges, Onno Kranenburg, Richard Meijer,[...]. Proc Natl Acad Sci U S A 2019
89
15

Redefining the in vivo origin of metanephric nephron progenitors enables generation of complex kidney structures from pluripotent stem cells.
Atsuhiro Taguchi, Yusuke Kaku, Tomoko Ohmori, Sazia Sharmin, Minetaro Ogawa, Hiroshi Sasaki, Ryuichi Nishinakamura. Cell Stem Cell 2014
460
13

Nephron organoids derived from human pluripotent stem cells model kidney development and injury.
Ryuji Morizane, Albert Q Lam, Benjamin S Freedman, Seiji Kishi, M Todd Valerius, Joseph V Bonventre. Nat Biotechnol 2015
434
13

A PDX/Organoid Biobank of Advanced Prostate Cancers Captures Genomic and Phenotypic Heterogeneity for Disease Modeling and Therapeutic Screening.
Michael L Beshiri, Caitlin M Tice, Crystal Tran, Holly M Nguyen, Adam G Sowalsky, Supreet Agarwal, Keith H Jansson, Qi Yang, Kerry M McGowen, JuanJuan Yin,[...]. Clin Cancer Res 2018
88
14

Human primary liver cancer organoids reveal intratumor and interpatient drug response heterogeneity.
Ling Li, Hildur Knutsdottir, Ken Hui, Matthew J Weiss, Jin He, Benjamin Philosophe, Andrew M Cameron, Christopher L Wolfgang, Timothy M Pawlik, Gabriel Ghiaur,[...]. JCI Insight 2019
69
18

Personalized In Vitro and In Vivo Cancer Models to Guide Precision Medicine.
Chantal Pauli, Benjamin D Hopkins, Davide Prandi, Reid Shaw, Tarcisio Fedrizzi, Andrea Sboner, Verena Sailer, Michael Augello, Loredana Puca, Rachele Rosati,[...]. Cancer Discov 2017
453
13

Human organoids: model systems for human biology and medicine.
Jihoon Kim, Bon-Kyoung Koo, Juergen A Knoblich. Nat Rev Mol Cell Biol 2020
381
13

Flow-enhanced vascularization and maturation of kidney organoids in vitro.
Kimberly A Homan, Navin Gupta, Katharina T Kroll, David B Kolesky, Mark Skylar-Scott, Tomoya Miyoshi, Donald Mau, M Todd Valerius, Thomas Ferrante, Joseph V Bonventre,[...]. Nat Methods 2019
274
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.