A citation-based method for searching scientific literature

Mirjana Gusic, Holger Prokisch. Front Genet 2020
Times Cited: 12







List of co-cited articles
91 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


MicroRNA directly enhances mitochondrial translation during muscle differentiation.
Xiaorong Zhang, Xinxin Zuo, Bo Yang, Zongran Li, Yuanchao Xue, Yu Zhou, Jie Huang, Xiaolu Zhao, Jie Zhou, Yun Yan,[...]. Cell 2014
254
50

The mitochondrial genome encodes abundant small noncoding RNAs.
Seungil Ro, Hsiu-Yen Ma, Chanjae Park, Nicole Ortogero, Rui Song, Grant W Hennig, Huili Zheng, Yung-Ming Lin, Loredana Moro, Jer-Tsong Hsieh,[...]. Cell Res 2013
94
41

Non-coding RNAs: the dark side of nuclear-mitochondrial communication.
Roberto Vendramin, Jean-Christophe Marine, Eleonora Leucci. EMBO J 2017
53
41

The human mitochondrial transcriptome.
Tim R Mercer, Shane Neph, Marcel E Dinger, Joanna Crawford, Martin A Smith, Anne-Marie J Shearwood, Eric Haugen, Cameron P Bracken, Oliver Rackham, John A Stamatoyannopoulos,[...]. Cell 2011
450
41

Two novel lncRNAs discovered in human mitochondrial DNA using PacBio full-length transcriptome data.
Shan Gao, Xiaoxuan Tian, Hong Chang, Yu Sun, Zhenfeng Wu, Zhi Cheng, Pengzhi Dong, Qiang Zhao, Jishou Ruan, Wenjun Bu. Mitochondrion 2018
35
33

Nuclear outsourcing of RNA interference components to human mitochondria.
Simonetta Bandiera, Silvia Rüberg, Muriel Girard, Nicolas Cagnard, Sylvain Hanein, Dominique Chrétien, Arnold Munnich, Stanislas Lyonnet, Alexandra Henrion-Caude. PLoS One 2011
157
33

Long noncoding RNAs are generated from the mitochondrial genome and regulated by nuclear-encoded proteins.
Oliver Rackham, Anne-Marie J Shearwood, Tim R Mercer, Stefan M K Davies, John S Mattick, Aleksandra Filipovska. RNA 2011
154
33

Nuclear localization of the mitochondrial ncRNAs in normal and cancer cells.
Eduardo Landerer, Jaime Villegas, Veronica A Burzio, Luciana Oliveira, Claudio Villota, Constanza Lopez, Franko Restovic, Ronny Martinez, Octavio Castillo, Luis O Burzio. Cell Oncol (Dordr) 2011
48
33

Circulating long noncoding RNA, LIPCAR, predicts survival in patients with heart failure.
Regalla Kumarswamy, Christophe Bauters, Ingo Volkmann, Fleur Maury, Jasmin Fetisch, Angelika Holzmann, Gilles Lemesle, Pascal de Groote, Florence Pinet, Thomas Thum. Circ Res 2014
380
33

Mitochondrial miRNA Determines Chemoresistance by Reprogramming Metabolism and Regulating Mitochondrial Transcription.
Song Fan, Tian Tian, Weixiong Chen, Xiaobin Lv, Xinyuan Lei, Hanqing Zhang, Sheng Sun, Lei Cai, Guokai Pan, Lile He,[...]. Cancer Res 2019
36
33

Nuclear miRNA regulates the mitochondrial genome in the heart.
Samarjit Das, Marcella Ferlito, Oliver A Kent, Karen Fox-Talbot, Richard Wang, Delong Liu, Nalini Raghavachari, Yanqin Yang, Sarah J Wheelan, Elizabeth Murphy,[...]. Circ Res 2012
194
33

Pre-microRNA and mature microRNA in human mitochondria.
Eric Barrey, Gaelle Saint-Auret, Blandine Bonnamy, Dominique Damas, Orane Boyer, Xavier Gidrol. PLoS One 2011
184
33

SAMMSON fosters cancer cell fitness by concertedly enhancing mitochondrial and cytosolic translation.
Roberto Vendramin, Yvessa Verheyden, Hideaki Ishikawa, Lucas Goedert, Emilien Nicolas, Kritika Saraf, Alexandros Armaos, Riccardo Delli Ponti, Keichi Izumikawa, Pieter Mestdagh,[...]. Nat Struct Mol Biol 2018
41
33

Expression of a family of noncoding mitochondrial RNAs distinguishes normal from cancer cells.
Verónica A Burzio, Claudio Villota, Jaime Villegas, Eduardo Landerer, Enrique Boccardo, Luisa L Villa, Ronny Martínez, Constanza Lopez, Fancy Gaete, Viviana Toro,[...]. Proc Natl Acad Sci U S A 2009
70
33

Identification of mecciRNAs and their roles in the mitochondrial entry of proteins.
Xu Liu, Xiaolin Wang, Jingxin Li, Shanshan Hu, Yuqi Deng, Hao Yin, Xichen Bao, Qiangfeng Cliff Zhang, Geng Wang, Baolong Wang,[...]. Sci China Life Sci 2020
28
33

MitoCarta2.0: an updated inventory of mammalian mitochondrial proteins.
Sarah E Calvo, Karl R Clauser, Vamsi K Mootha. Nucleic Acids Res 2016
710
25

A rescue factor abolishing neuronal cell death by a wide spectrum of familial Alzheimer's disease genes and Abeta.
Y Hashimoto, T Niikura, H Tajima, T Yasukawa, H Sudo, Y Ito, Y Kita, M Kawasumi, K Kouyama, M Doyu,[...]. Proc Natl Acad Sci U S A 2001
400
25

Mitoregulin: A lncRNA-Encoded Microprotein that Supports Mitochondrial Supercomplexes and Respiratory Efficiency.
Colleen S Stein, Pooja Jadiya, Xiaoming Zhang, Jared M McLendon, Gabrielle M Abouassaly, Nathan H Witmer, Ethan J Anderson, John W Elrod, Ryan L Boudreau. Cell Rep 2018
66
25

Regulation of microRNA function in animals.
Luca F R Gebert, Ian J MacRae. Nat Rev Mol Cell Biol 2019
637
25

Import of Non-Coding RNAs into Human Mitochondria: A Critical Review and Emerging Approaches.
Damien Jeandard, Anna Smirnova, Ivan Tarassov, Eric Barrey, Alexandre Smirnov, Nina Entelis. Cells 2019
24
25

Expression of a novel non-coding mitochondrial RNA in human proliferating cells.
Jaime Villegas, Veronica Burzio, Claudio Villota, Eduardo Landerer, Ronny Martinez, Marcela Santander, Rodrigo Martinez, Rodrigo Pinto, María I Vera, Enrique Boccardo,[...]. Nucleic Acids Res 2007
44
25

PNPASE regulates RNA import into mitochondria.
Geng Wang, Hsiao-Wen Chen, Yavuz Oktay, Jin Zhang, Eric L Allen, Geoffrey M Smith, Kelly C Fan, Jason S Hong, Samuel W French, J Michael McCaffery,[...]. Cell 2010
215
25

Targeting Mitochondria-Located circRNA SCAR Alleviates NASH via Reducing mROS Output.
Qiyi Zhao, Jiayu Liu, Hong Deng, Ruiying Ma, Jian-You Liao, Huixin Liang, Jingxiong Hu, Jiaqian Li, Zhiyong Guo, Junchao Cai,[...]. Cell 2020
33
25

RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme.
Johann Holzmann, Peter Frank, Esther Löffler, Keiryn L Bennett, Christopher Gerner, Walter Rossmanith. Cell 2008
359
25

Subcellular partitioning of MRP RNA assessed by ultrastructural and biochemical analysis.
K Li, C S Smagula, W J Parsons, J A Richardson, M Gonzalez, H K Hagler, R S Williams. J Cell Biol 1994
105
25

Exploring the mitochondrial microRNA import pathway through Polynucleotide Phosphorylase (PNPase).
Danielle L Shepherd, Quincy A Hathaway, Mark V Pinti, Cody E Nichols, Andrya J Durr, Shruthi Sreekumar, Kristen M Hughes, Seth M Stine, Ivan Martinez, John M Hollander. J Mol Cell Cardiol 2017
36
25

MitomiRs delineating the intracellular localization of microRNAs at mitochondria.
S Bandiera, R Matégot, M Girard, J Demongeot, A Henrion-Caude. Free Radic Biol Med 2013
86
25

Melanoma addiction to the long non-coding RNA SAMMSON.
Eleonora Leucci, Roberto Vendramin, Marco Spinazzi, Patrick Laurette, Mark Fiers, Jasper Wouters, Enrico Radaelli, Sven Eyckerman, Carina Leonelli, Katrien Vanderheyden,[...]. Nature 2016
267
25

Mitochondrial Genome-Derived circRNA mc-COX2 Functions as an Oncogene in Chronic Lymphocytic Leukemia.
Zijuan Wu, Handong Sun, Chunling Wang, Wenjie Liu, Ming Liu, Yanhui Zhu, Wei Xu, Hui Jin, Jianyong Li. Mol Ther Nucleic Acids 2020
19
25

Mitochondrial ncRNA targeting induces cell cycle arrest and tumor growth inhibition of MDA-MB-231 breast cancer cells through reduction of key cell cycle progression factors.
Christopher Fitzpatrick, Maximiliano F Bendek, Macarena Briones, Nicole Farfán, Valeria A Silva, Gino Nardocci, Martín Montecino, Anne Boland, Jean-François Deleuze, Jaime Villegas,[...]. Cell Death Dis 2019
14
25

Deep RNA sequencing reveals dynamic regulation of myocardial noncoding RNAs in failing human heart and remodeling with mechanical circulatory support.
Kai-Chien Yang, Kathryn A Yamada, Akshar Y Patel, Veli K Topkara, Isaac George, Faisal H Cheema, Gregory A Ewald, Douglas L Mann, Jeanne M Nerbonne. Circulation 2014
251
25

The Non-Canonical Aspects of MicroRNAs: Many Roads to Gene Regulation.
Christiaan J Stavast, Stefan J Erkeland. Cells 2019
59
16

miRBase: from microRNA sequences to function.
Ana Kozomara, Maria Birgaoanu, Sam Griffiths-Jones. Nucleic Acids Res 2019
845
16


MicroRNA: Biogenesis, Function and Role in Cancer.
Leigh-Ann Macfarlane, Paul R Murphy. Curr Genomics 2010
788
16

Naturally occurring mitochondrial-derived peptides are age-dependent regulators of apoptosis, insulin sensitivity, and inflammatory markers.
Laura J Cobb, Changhan Lee, Jialin Xiao, Kelvin Yen, Richard G Wong, Hiromi K Nakamura, Hemal H Mehta, Qinglei Gao, Carmel Ashur, Derek M Huffman,[...]. Aging (Albany NY) 2016
106
16

Landscape of transcription in human cells.
Sarah Djebali, Carrie A Davis, Angelika Merkel, Alex Dobin, Timo Lassmann, Ali Mortazavi, Andrea Tanzer, Julien Lagarde, Wei Lin, Felix Schlesinger,[...]. Nature 2012
16

The mitochondrial-derived peptide MOTS-c promotes metabolic homeostasis and reduces obesity and insulin resistance.
Changhan Lee, Jennifer Zeng, Brian G Drew, Tamer Sallam, Alejandro Martin-Montalvo, Junxiang Wan, Su-Jeong Kim, Hemal Mehta, Andrea L Hevener, Rafael de Cabo,[...]. Cell Metab 2015
249
16

The protein import machinery of mitochondria-a regulatory hub in metabolism, stress, and disease.
Angelika B Harbauer, René P Zahedi, Albert Sickmann, Nikolaus Pfanner, Chris Meisinger. Cell Metab 2014
232
16

Mitochondrial DNA in innate immune responses and inflammatory pathology.
A Phillip West, Gerald S Shadel. Nat Rev Immunol 2017
300
16

Pervasive functional translation of noncanonical human open reading frames.
Jin Chen, Andreas-David Brunner, J Zachery Cogan, James K Nuñez, Alexander P Fields, Britt Adamson, Daniel N Itzhak, Jason Y Li, Matthias Mann, Manuel D Leonetti,[...]. Science 2020
107
16

The long non-coding RNA Cerox1 is a post transcriptional regulator of mitochondrial complex I catalytic activity.
Tamara M Sirey, Kenny Roberts, Wilfried Haerty, Oscar Bedoya-Reina, Sebastian Rogatti-Granados, Jennifer Y Tan, Nick Li, Lisa C Heather, Roderick N Carter, Sarah Cooper,[...]. Elife 2019
14
16

Mitochondrial diseases.
Gráinne S Gorman, Patrick F Chinnery, Salvatore DiMauro, Michio Hirano, Yasutoshi Koga, Robert McFarland, Anu Suomalainen, David R Thorburn, Massimo Zeviani, Douglass M Turnbull. Nat Rev Dis Primers 2016
403
16

MOXI Is a Mitochondrial Micropeptide That Enhances Fatty Acid β-Oxidation.
Catherine A Makarewich, Kedryn K Baskin, Amir Z Munir, Svetlana Bezprozvannaya, Gaurav Sharma, Chalermchai Khemtong, Akansha M Shah, John R McAnally, Craig R Malloy, Luke I Szweda,[...]. Cell Rep 2018
52
16

Normal oxidative damage to mitochondrial and nuclear DNA is extensive.
C Richter, J W Park, B N Ames. Proc Natl Acad Sci U S A 1988
16

Mitochondrial Epigenetics: Non-Coding RNAs as a Novel Layer of Complexity.
Giovanna C Cavalcante, Leandro Magalhães, Ândrea Ribeiro-Dos-Santos, Amanda F Vidal. Int J Mol Sci 2020
10
20

N6-Deoxyadenosine Methylation in Mammalian Mitochondrial DNA.
Ziyang Hao, Tong Wu, Xiaolong Cui, Pingping Zhu, Caiping Tan, Xiaoyang Dou, Kai-Wen Hsu, Yueh-Te Lin, Pei-Hua Peng, Li-Sheng Zhang,[...]. Mol Cell 2020
35
16


The effects of mitochondria-associated long noncoding RNAs in cancer mitochondria: New players in an old arena.
Yijing Zhao, Lemeng Sun, Rachel R Wang, Ji-Fan Hu, Jiuwei Cui. Crit Rev Oncol Hematol 2018
22
16

Interplay of mitochondrial metabolism and microRNAs.
Julian Geiger, Louise T Dalgaard. Cell Mol Life Sci 2017
45
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.