A citation-based method for searching scientific literature

Sruti Patoori, Nathalie Jean-Charles, Ariana Gopal, Sacha Sulaiman, Sneha Gopal, Brian Wang, Benjamin Souferi, Mark M Emerson. Neural Dev 2020
Times Cited: 4







List of co-cited articles
20 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Identification and characterization of early photoreceptor cis-regulatory elements and their relation to Onecut1.
Nathalie Jean-Charles, Diego F Buenaventura, Mark M Emerson. Neural Dev 2018
8
75

Otx2 and Onecut1 promote the fates of cone photoreceptors and horizontal cells and repress rod photoreceptors.
Mark M Emerson, Natalia Surzenko, Jillian J Goetz, Jeffrey Trimarchi, Constance L Cepko. Dev Cell 2013
64
75

Lineage tracing analysis of cone photoreceptor associated cis-regulatory elements in the developing chicken retina.
Estie Schick, Sean D McCaffery, Erin E Keblish, Cassandra Thakurdin, Mark M Emerson. Sci Rep 2019
8
75


OTX2 represses sister cell fate choices in the developing retina to promote photoreceptor specification.
Miruna Georgiana Ghinia Tegla, Diego F Buenaventura, Diana Y Kim, Cassandra Thakurdin, Kevin C Gonzalez, Mark M Emerson. Elife 2020
9
75


Cone photoreceptor types in zebrafish are generated by symmetric terminal divisions of dedicated precursors.
Sachihiro C Suzuki, Adam Bleckert, Philip R Williams, Masaki Takechi, Shoji Kawamura, Rachel O L Wong. Proc Natl Acad Sci U S A 2013
108
75

Transcription factor Olig2 defines subpopulations of retinal progenitor cells biased toward specific cell fates.
Brian P Hafler, Natalia Surzenko, Kevin T Beier, Claudio Punzo, Jeffrey M Trimarchi, Jennifer H Kong, Constance L Cepko. Proc Natl Acad Sci U S A 2012
77
75

Ptf1a determines horizontal and amacrine cell fates during mouse retinal development.
Yoshio Fujitani, Shuko Fujitani, Huijun Luo, Feng Qiu, Jared Burlison, Qiaoming Long, Yoshiya Kawaguchi, Helena Edlund, Raymond J MacDonald, Takahisa Furukawa,[...]. Development 2006
165
50

Onecut1 and Onecut2 redundantly regulate early retinal cell fates during development.
Darshan Sapkota, Hemabindu Chintala, Fuguo Wu, Steven J Fliesler, Zihua Hu, Xiuqian Mu. Proc Natl Acad Sci U S A 2014
51
50

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
50

Heterogeneity of horizontal cells in the chicken retina.
Andy J Fischer, Jennifer J Stanke, Gina Aloisio, Heather Hoy, William K Stell. J Comp Neurol 2007
62
50

Functional roles of Otx2 transcription factor in postnatal mouse retinal development.
Chieko Koike, Akihiro Nishida, Shinji Ueno, Hiromitsu Saito, Rikako Sanuki, Shigeru Sato, Akiko Furukawa, Shinichi Aizawa, Isao Matsuo, Noboru Suzuki,[...]. Mol Cell Biol 2007
125
50

PTF1 is an organ-specific and Notch-independent basic helix-loop-helix complex containing the mammalian Suppressor of Hairless (RBP-J) or its paralogue, RBP-L.
Thomas M Beres, Toshihiko Masui, Galvin H Swift, Ling Shi, R Michael Henke, Raymond J MacDonald. Mol Cell Biol 2006
155
50

Analysis of thyroid response element activity during retinal development.
Nathan A Billings, Mark M Emerson, Constance L Cepko. PLoS One 2010
21
50



Ptf1a/Rbpj complex inhibits ganglion cell fate and drives the specification of all horizontal cell subtypes in the chick retina.
E C Lelièvre, M Lek, H Boije, L Houille-Vernes, V Brajeul, A Slembrouck, J E Roger, J A Sahel, J M Matter, F Sennlaub,[...]. Dev Biol 2011
27
50

Electroporation and RNA interference in the rodent retina in vivo and in vitro.
Takahiko Matsuda, Constance L Cepko. Proc Natl Acad Sci U S A 2004
712
50

An FGF-driven feed-forward circuit patterns the cardiopharyngeal mesoderm in space and time.
Florian Razy-Krajka, Basile Gravez, Nicole Kaplan, Claudia Racioppi, Wei Wang, Lionel Christiaen. Elife 2018
13
25

Conservation of notochord gene expression across chordates: insights from the Leprecan gene family.
Terence D Capellini, Matthew P Dunn, Yale J Passamaneck, Licia Selleri, Anna Di Gregorio. Genesis 2008
28
25

Cerberus-Nodal-Lefty-Pitx signaling cascade controls left-right asymmetry in amphioxus.
Guang Li, Xian Liu, Chaofan Xing, Huayang Zhang, Sebastian M Shimeld, Yiquan Wang. Proc Natl Acad Sci U S A 2017
31
25

Mosaic and regulative development: two faces of one coin.
Peter A Lawrence, Michael Levine. Curr Biol 2006
31
25

Habenular Neurogenesis in Zebrafish Is Regulated by a Hedgehog, Pax6 Proneural Gene Cascade.
Caroline Halluin, Romain Madelaine, François Naye, Bernard Peers, Myriam Roussigné, Patrick Blader. PLoS One 2016
11
25

Development of the mesencephalic dopaminergic neuron system is compromised in the absence of neurogenin 2.
E Andersson, J B Jensen, M Parmar, F Guillemot, A Björklund. Development 2006
124
25

Characterization of Brachyury-downstream notochord genes in the Ciona intestinalis embryo.
K Hotta, H Takahashi, T Asakura, B Saitoh, N Takatori, Y Satou, N Satoh. Dev Biol 2000
121
25



Mutations at the mouse microphthalmia locus are associated with defects in a gene encoding a novel basic-helix-loop-helix-zipper protein.
C A Hodgkinson, K J Moore, A Nakayama, E Steingrímsson, N G Copeland, N A Jenkins, H Arnheiter. Cell 1993
891
25


The mammalian basic helix-loop-helix/PAS family of transcriptional regulators.
Robyn J Kewley, Murray L Whitelaw, Anne Chapman-Smith. Int J Biochem Cell Biol 2004
370
25

PAS domains: internal sensors of oxygen, redox potential, and light.
B L Taylor, I B Zhulin. Microbiol Mol Biol Rev 1999
25




Migratory neuronal progenitors arise from the neural plate borders in tunicates.
Alberto Stolfi, Kerrianne Ryan, Ian A Meinertzhagen, Lionel Christiaen. Nature 2015
78
25

Early chordate origins of the vertebrate second heart field.
Alberto Stolfi, T Blair Gainous, John J Young, Alessandro Mori, Michael Levine, Lionel Christiaen. Science 2010
111
25

The regulation of forkhead/HNF-3beta expression in the Ciona embryo.
A Di Gregorio, J C Corbo, M Levine. Dev Biol 2001
54
25



Monoaminergic modulation of photoreception in ascidian: evidence for a proto-hypothalamo-retinal territory.
Florian Razy-Krajka, Euan R Brown, Takeo Horie, Jacques Callebert, Yasunori Sasakura, Jean-Stéphane Joly, Takehiro G Kusakabe, Philippe Vernier. BMC Biol 2012
20
25

Molecular regionalization of the developing amphioxus neural tube challenges major partitions of the vertebrate brain.
Beatriz Albuixech-Crespo, Laura López-Blanch, Demian Burguera, Ignacio Maeso, Luisa Sánchez-Arrones, Juan Antonio Moreno-Bravo, Ildiko Somorjai, Juan Pascual-Anaya, Eduardo Puelles, Paola Bovolenta,[...]. PLoS Biol 2017
48
25

The ascidian homolog of the vertebrate homeobox gene Rx is essential for ocellus development and function.
Salvatore D'Aniello, Enrico D'Aniello, Annamaria Locascio, Alessandra Memoli, Marcella Corrado, Monia Teresa Russo, Francesco Aniello, Laura Fucci, Euan R Brown, Margherita Branno. Differentiation 2006
35
25


Ptf1a, a bHLH transcriptional gene, defines GABAergic neuronal fates in cerebellum.
Mikio Hoshino, Shoko Nakamura, Kiyoshi Mori, Takeshi Kawauchi, Mami Terao, Yoshiaki V Nishimura, Akihisa Fukuda, Toshimitsu Fuse, Naoki Matsuo, Masaki Sone,[...]. Neuron 2005
319
25

Onecut is a direct neural-specific transcriptional activator of Rx in Ciona intestinalis.
Enrico D'Aniello, Maria Rosa Pezzotti, Annamaria Locascio, Margherita Branno. Dev Biol 2011
15
25



Novel genes involved in Ciona intestinalis embryogenesis: characterization of gene knockdown embryos.
Mayuko Hamada, Shuichi Wada, Kenji Kobayashi, Nori Satoh. Dev Dyn 2007
8
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.