A citation-based method for searching scientific literature

Jonathan B Chaires, Robert D Gray, William L Dean, Robert Monsen, Lynn W DeLeeuw, Vilius Stribinskis, John O Trent. Nucleic Acids Res 2020
Times Cited: 8







List of co-cited articles
136 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Human POT1 disrupts telomeric G-quadruplexes allowing telomerase extension in vitro.
Arthur J Zaug, Elaine R Podell, Thomas R Cech. Proc Natl Acad Sci U S A 2005
266
87

Inhibition of telomerase by G-quartet DNA structures.
A M Zahler, J R Williamson, T R Cech, D M Prescott. Nature 1991
869
62

In vitro generated antibodies specific for telomeric guanine-quadruplex DNA react with Stylonychia lemnae macronuclei.
C Schaffitzel, I Berger, J Postberg, J Hanes, H J Lipps, A Plückthun. Proc Natl Acad Sci U S A 2001
444
62

G-quadruplex formation in telomeres enhances POT1/TPP1 protection against RPA binding.
Sujay Ray, Jigar N Bandaria, Mohammad H Qureshi, Ahmet Yildiz, Hamza Balci. Proc Natl Acad Sci U S A 2014
80
62

Inhibition of human telomerase by a G-quadruplex-interactive compound.
D Sun, B Thompson, B E Cathers, M Salazar, S M Kerwin, J O Trent, T C Jenkins, S Neidle, L H Hurley. J Med Chem 1997
568
50

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
661
50

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
50


POT1-TPP1 regulates telomeric overhang structural dynamics.
Helen Hwang, Noah Buncher, Patricia L Opresko, Sua Myong. Structure 2012
78
50




Reevaluation of telomerase inhibition by quadruplex ligands and their mechanisms of action.
Anne De Cian, Gael Cristofari, Patrick Reichenbach, Elsa De Lemos, David Monchaud, Marie-Paule Teulade-Fichou, Kazuo Shin-Ya, Laurent Lacroix, Joachim Lingner, Jean-Louis Mergny. Proc Natl Acad Sci U S A 2007
191
37

Telomere and telomerase in stem cells.
E Hiyama, K Hiyama. Br J Cancer 2007
292
37

Arrangements of human telomere DNA quadruplex in physiologically relevant K+ solutions.
D Renciuk, I Kejnovská, P Skoláková, K Bednárová, J Motlová, M Vorlícková. Nucleic Acids Res 2009
141
37


Specific association of human telomerase activity with immortal cells and cancer.
N W Kim, M A Piatyszek, K R Prowse, C B Harley, M D West, P L Ho, G M Coviello, W E Wright, S L Weinrich, J W Shay. Science 1994
37

Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers.
Kah Wai Lim, Samir Amrane, Serge Bouaziz, Weixin Xu, Yuguang Mu, Dinshaw J Patel, Kim Ngoc Luu, Anh Tuân Phan. J Am Chem Soc 2009
316
37


Telomeric G-quadruplexes are a substrate and site of localization for human telomerase.
Aaron L Moye, Karina C Porter, Scott B Cohen, Tram Phan, Katherine G Zyner, Natsuki Sasaki, George O Lovrecz, Jennifer L Beck, Tracy M Bryan. Nat Commun 2015
117
37

Telomere end-binding proteins control the formation of G-quadruplex DNA structures in vivo.
Katrin Paeschke, Tomas Simonsson, Jan Postberg, Daniela Rhodes, Hans Joachim Lipps. Nat Struct Mol Biol 2005
403
37

FANCJ is a structure-specific DNA helicase associated with the maintenance of genomic G/C tracts.
Timothy B C London, Louise J Barber, Georgina Mosedale, Gavin P Kelly, Shankar Balasubramanian, Ian D Hickson, Simon J Boulton, Kevin Hiom. J Biol Chem 2008
158
37

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
37

Telomere DNA G-quadruplex folding within actively extending human telomerase.
Linnea I Jansson, Jendrik Hentschel, Joseph W Parks, Terren R Chang, Cheng Lu, Rishika Baral, Clive R Bagshaw, Michael D Stone. Proc Natl Acad Sci U S A 2019
23
37

Normal human chromosomes have long G-rich telomeric overhangs at one end.
W E Wright, V M Tesmer, K E Huffman, S D Levene, J W Shay. Genes Dev 1997
521
37

POT1-TPP1 Binding and Unfolding of Telomere DNA Discriminates against Structural Polymorphism.
Michael R Mullins, Malligarjunan Rajavel, Wilnelly Hernandez-Sanchez, Maria de la Fuente, Sherri M Biendarra, Michael E Harris, Derek J Taylor. J Mol Biol 2016
15
37

G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
318
37

Targeting BRCA1 and BRCA2 Deficiencies with G-Quadruplex-Interacting Compounds.
Jutta Zimmer, Eliana M C Tacconi, Cecilia Folio, Sophie Badie, Manuela Porru, Kerstin Klare, Manuela Tumiati, Enni Markkanen, Swagata Halder, Anderson Ryan,[...]. Mol Cell 2016
102
37

A survey of telomerase activity in human cancer.
J W Shay, S Bacchetti. Eur J Cancer 1997
37

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
977
37

Small-molecule-induced DNA damage identifies alternative DNA structures in human genes.
Raphaël Rodriguez, Kyle M Miller, Josep V Forment, Charles R Bradshaw, Mehran Nikan, Sébastien Britton, Tobias Oelschlaegel, Blerta Xhemalce, Shankar Balasubramanian, Stephen P Jackson. Nat Chem Biol 2012
386
37

Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
37

The yeast Pif1 helicase prevents genomic instability caused by G-quadruplex-forming CEB1 sequences in vivo.
Cyril Ribeyre, Judith Lopes, Jean-Baptiste Boulé, Aurèle Piazza, Aurore Guédin, Virginia A Zakian, Jean-Louis Mergny, Alain Nicolas. PLoS Genet 2009
242
37

A novel small molecule that alters shelterin integrity and triggers a DNA-damage response at telomeres.
Raphaël Rodriguez, Sebastian Müller, Justin A Yeoman, Chantal Trentesaux, Jean-François Riou, Shankar Balasubramanian. J Am Chem Soc 2008
233
37

Human replication protein A unfolds telomeric G-quadruplexes.
Tonatiuh Romero Salas, Irina Petruseva, Olga Lavrik, Anne Bourdoncle, Jean-Louis Mergny, Alain Favre, Carole Saintomé. Nucleic Acids Res 2006
122
37

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
37


Multiple POT1-TPP1 proteins coat and compact long telomeric single-stranded DNA.
Derek J Taylor, Elaine R Podell, Dylan J Taatjes, Thomas R Cech. J Mol Biol 2011
26
37


How shelterin protects mammalian telomeres.
Wilhelm Palm, Titia de Lange. Annu Rev Genet 2008
37

Rudimentary G-quadruplex-based telomere capping in Saccharomyces cerevisiae.
Jasmine S Smith, Qijun Chen, Liliya A Yatsunyk, John M Nicoludis, Mark S Garcia, Ramon Kranaster, Shankar Balasubramanian, David Monchaud, Marie-Paule Teulade-Fichou, Lara Abramowitz,[...]. Nat Struct Mol Biol 2011
77
25

Telomerase recruitment by the telomere end binding protein-beta facilitates G-quadruplex DNA unfolding in ciliates.
Katrin Paeschke, Stefan Juranek, Tomas Simonsson, Anne Hempel, Daniela Rhodes, Hans Joachim Lipps. Nat Struct Mol Biol 2008
98
25

Hydration is a major determinant of the G-quadruplex stability and conformation of the human telomere 3' sequence of d(AG3(TTAG3)3).
M Clarke Miller, Robert Buscaglia, Jonathan B Chaires, Andrew N Lane, John O Trent. J Am Chem Soc 2010
149
25

Extension of G-quadruplex DNA by ciliate telomerase.
Liana Oganesian, Ian K Moon, Tracy M Bryan, Michael B Jarstfer. EMBO J 2006
91
25

Conformation Selective Antibody Enables Genome Profiling and Leads to Discovery of Parallel G-Quadruplex in Human Telomeres.
Hui-Yun Liu, Qi Zhao, Tian-Peng Zhang, Yue Wu, Yun-Xia Xiong, Shi-Ke Wang, Yuan-Long Ge, Jin-Hui He, Peng Lv, Tian-Miao Ou,[...]. Cell Chem Biol 2016
38
25

Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Michael C Chen, Ramreddy Tippana, Natalia A Demeshkina, Pierre Murat, Shankar Balasubramanian, Sua Myong, Adrian R Ferré-D'Amaré. Nature 2018
95
25

Telomeres shorten during ageing of human fibroblasts.
C B Harley, A B Futcher, C W Greider. Nature 1990
25

Highly efficient G-quadruplex recognition by bisquinolinium compounds.
Anne De Cian, Elsa Delemos, Jean-Louis Mergny, Marie-Paule Teulade-Fichou, David Monchaud. J Am Chem Soc 2007
263
25

Telomeric overhang length determines structural dynamics and accessibility to telomerase and ALT-associated proteins.
Helen Hwang, Alex Kreig, Jacob Calvert, Justin Lormand, Yongho Kwon, James M Daley, Patrick Sung, Patricia L Opresko, Sua Myong. Structure 2014
34
25

Telomerase recognizes G-quadruplex and linear DNA as distinct substrates.
Liana Oganesian, Mark E Graham, Phillip J Robinson, Tracy M Bryan. Biochemistry 2007
27
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.