A citation-based method for searching scientific literature

James P Broughton, Xianding Deng, Guixia Yu, Clare L Fasching, Venice Servellita, Jasmeet Singh, Xin Miao, Jessica A Streithorst, Andrea Granados, Alicia Sotomayor-Gonzalez, Kelsey Zorn, Allan Gopez, Elaine Hsu, Wei Gu, Steve Miller, Chao-Yang Pan, Hugo Guevara, Debra A Wadford, Janice S Chen, Charles Y Chiu. Nat Biotechnol 2020
Times Cited: 905







List of co-cited articles
810 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


CRISPR-Cas12a target binding unleashes indiscriminate single-stranded DNase activity.
Janice S Chen, Enbo Ma, Lucas B Harrington, Maria Da Costa, Xinran Tian, Joel M Palefsky, Jennifer A Doudna. Science 2018
909
51

Nucleic acid detection with CRISPR-Cas13a/C2c2.
Jonathan S Gootenberg, Omar O Abudayyeh, Jeong Wook Lee, Patrick Essletzbichler, Aaron J Dy, Julia Joung, Vanessa Verdine, Nina Donghia, Nichole M Daringer, Catherine A Freije,[...]. Science 2017
42

Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6.
Jonathan S Gootenberg, Omar O Abudayyeh, Max J Kellner, Julia Joung, James J Collins, Feng Zhang. Science 2018
733
31

Field-deployable viral diagnostics using CRISPR-Cas13.
Cameron Myhrvold, Catherine A Freije, Jonathan S Gootenberg, Omar O Abudayyeh, Hayden C Metsky, Ann F Durbin, Max J Kellner, Amanda L Tan, Lauren M Paul, Leda A Parham,[...]. Science 2018
471
27

Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing.
Julia Joung, Alim Ladha, Makoto Saito, Nam-Gyun Kim, Ann E Woolley, Michael Segel, Robert P J Barretto, Amardeep Ranu, Rhiannon K Macrae, Guilhem Faure,[...]. N Engl J Med 2020
219
26

Ultrasensitive and visual detection of SARS-CoV-2 using all-in-one dual CRISPR-Cas12a assay.
Xiong Ding, Kun Yin, Ziyue Li, Rajesh V Lalla, Enrique Ballesteros, Maroun M Sfeir, Changchun Liu. Nat Commun 2020
193
24

Amplification-free detection of SARS-CoV-2 with CRISPR-Cas13a and mobile phone microscopy.
Parinaz Fozouni, Sungmin Son, María Díaz de León Derby, Gavin J Knott, Carley N Gray, Michael V D'Ambrosio, Chunyu Zhao, Neil A Switz, G Renuka Kumar, Stephanie I Stephens,[...]. Cell 2021
190
22

Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR.
Victor M Corman, Olfert Landt, Marco Kaiser, Richard Molenkamp, Adam Meijer, Daniel Kw Chu, Tobias Bleicker, Sebastian Brünink, Julia Schneider, Marie Luisa Schmidt,[...]. Euro Surveill 2020
21

Loop-mediated isothermal amplification of DNA.
T Notomi, H Okayama, H Masubuchi, T Yonekawa, K Watanabe, N Amino, T Hase. Nucleic Acids Res 2000
21

SHERLOCK: nucleic acid detection with CRISPR nucleases.
Max J Kellner, Jeremy G Koob, Jonathan S Gootenberg, Omar O Abudayyeh, Feng Zhang. Nat Protoc 2019
330
21

Clinical validation of a Cas13-based assay for the detection of SARS-CoV-2 RNA.
Maturada Patchsung, Krittapas Jantarug, Archiraya Pattama, Kanokpol Aphicho, Surased Suraritdechachai, Piyachat Meesawat, Khomkrit Sappakhaw, Nattawat Leelahakorn, Theerawat Ruenkam, Thanakrit Wongsatit,[...]. Nat Biomed Eng 2020
173
21

Massively multiplexed nucleic acid detection with Cas13.
Cheri M Ackerman, Cameron Myhrvold, Sri Gowtham Thakku, Catherine A Freije, Hayden C Metsky, David K Yang, Simon H Ye, Chloe K Boehm, Tinna-Sólveig F Kosoko-Thoroddsen, Jared Kehe,[...]. Nature 2020
177
19

CRISPR-Cas12a-assisted nucleic acid detection.
Shi-Yuan Li, Qiu-Xiang Cheng, Jing-Man Wang, Xiao-Yan Li, Zi-Long Zhang, Song Gao, Rui-Bing Cao, Guo-Ping Zhao, Jin Wang. Cell Discov 2018
297
19

Streamlined inactivation, amplification, and Cas13-based detection of SARS-CoV-2.
Jon Arizti-Sanz, Catherine A Freije, Alexandra C Stanton, Brittany A Petros, Chloe K Boehm, Sameed Siddiqui, Bennett M Shaw, Gordon Adams, Tinna-Solveig F Kosoko-Thoroddsen, Molly E Kemball,[...]. Nat Commun 2020
108
18

opvCRISPR: One-pot visual RT-LAMP-CRISPR platform for SARS-cov-2 detection.
Rui Wang, Chunyan Qian, Yanan Pang, Miaomiao Li, Yu Yang, Haijing Ma, Manying Zhao, Feng Qian, Hang Yu, Zhenping Liu,[...]. Biosens Bioelectron 2021
74
24

Rapid Detection of COVID-19 Causative Virus (SARS-CoV-2) in Human Nasopharyngeal Swab Specimens Using Field-Effect Transistor-Based Biosensor.
Giwan Seo, Geonhee Lee, Mi Jeong Kim, Seung-Hwa Baek, Minsuk Choi, Keun Bon Ku, Chang-Seop Lee, Sangmi Jun, Daeui Park, Hong Gi Kim,[...]. ACS Nano 2020
607
18

A colorimetric RT-LAMP assay and LAMP-sequencing for detecting SARS-CoV-2 RNA in clinical samples.
Viet Loan Dao Thi, Konrad Herbst, Kathleen Boerner, Matthias Meurer, Lukas Pm Kremer, Daniel Kirrmaier, Andrew Freistaedter, Dimitrios Papagiannidis, Carla Galmozzi, Megan L Stanifer,[...]. Sci Transl Med 2020
260
18

C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector.
Omar O Abudayyeh, Jonathan S Gootenberg, Silvana Konermann, Julia Joung, Ian M Slaymaker, David B T Cox, Sergey Shmakov, Kira S Makarova, Ekaterina Semenova, Leonid Minakhin,[...]. Science 2016
870
16

A Novel Coronavirus from Patients with Pneumonia in China, 2019.
Na Zhu, Dingyu Zhang, Wenling Wang, Xingwang Li, Bo Yang, Jingdong Song, Xiang Zhao, Baoying Huang, Weifeng Shi, Roujian Lu,[...]. N Engl J Med 2020
15

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
14

CRISPR/Cas Systems towards Next-Generation Biosensing.
Yi Li, Shiyuan Li, Jin Wang, Guozhen Liu. Trends Biotechnol 2019
261
14

HOLMESv2: A CRISPR-Cas12b-Assisted Platform for Nucleic Acid Detection and DNA Methylation Quantitation.
Linxian Li, Shiyuan Li, Na Wu, Jiacheng Wu, Gang Wang, Guoping Zhao, Jin Wang. ACS Synth Biol 2019
139
14

Ultra-sensitive and high-throughput CRISPR-p owered COVID-19 diagnosis.
Zhen Huang, Di Tian, Yang Liu, Zhen Lin, Christopher J Lyon, Weihua Lai, Dahlene Fusco, Arnaud Drouin, Xiaoming Yin, Tony Hu,[...]. Biosens Bioelectron 2020
157
14

DNA detection using recombination proteins.
Olaf Piepenburg, Colin H Williams, Derek L Stemple, Niall A Armes. PLoS Biol 2006
913
14


Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
13

Programmed DNA destruction by miniature CRISPR-Cas14 enzymes.
Lucas B Harrington, David Burstein, Janice S Chen, David Paez-Espino, Enbo Ma, Isaac P Witte, Joshua C Cofsky, Nikos C Kyrpides, Jillian F Banfield, Jennifer A Doudna. Science 2018
315
13

CDetection: CRISPR-Cas12b-based DNA detection with sub-attomolar sensitivity and single-base specificity.
Fei Teng, Lu Guo, Tongtong Cui, Xin-Ge Wang, Kai Xu, Qingqin Gao, Qi Zhou, Wei Li. Genome Biol 2019
101
13

Dual-Functional Plasmonic Photothermal Biosensors for Highly Accurate Severe Acute Respiratory Syndrome Coronavirus 2 Detection.
Guangyu Qiu, Zhibo Gai, Yile Tao, Jean Schmitt, Gerd A Kullak-Ublick, Jing Wang. ACS Nano 2020
379
13

Rapid isothermal amplification and portable detection system for SARS-CoV-2.
Anurup Ganguli, Ariana Mostafa, Jacob Berger, Mehmet Y Aydin, Fu Sun, Sarah A Stewart de Ramirez, Enrique Valera, Brian T Cunningham, William P King, Rashid Bashir. Proc Natl Acad Sci U S A 2020
155
13

CRISPR-based diagnostics.
Michael M Kaminski, Omar O Abudayyeh, Jonathan S Gootenberg, Feng Zhang, James J Collins. Nat Biomed Eng 2021
58
22

Rapid, Low-Cost Detection of Zika Virus Using Programmable Biomolecular Components.
Keith Pardee, Alexander A Green, Melissa K Takahashi, Dana Braff, Guillaume Lambert, Jeong Wook Lee, Tom Ferrante, Duo Ma, Nina Donghia, Melina Fan,[...]. Cell 2016
534
12

CRISPR-Cas12a has both cis- and trans-cleavage activities on single-stranded DNA.
Shi-Yuan Li, Qiu-Xiang Cheng, Jia-Kun Liu, Xiao-Qun Nie, Guo-Ping Zhao, Jin Wang. Cell Res 2018
248
12

Diagnosing COVID-19: The Disease and Tools for Detection.
Buddhisha Udugama, Pranav Kadhiresan, Hannah N Kozlowski, Ayden Malekjahani, Matthew Osborne, Vanessa Y C Li, Hongmin Chen, Samira Mubareka, Jonathan B Gubbay, Warren C W Chan. ACS Nano 2020
701
12

Electric field-driven microfluidics for rapid CRISPR-based diagnostics and its application to detection of SARS-CoV-2.
Ashwin Ramachandran, Diego A Huyke, Eesha Sharma, Malaya K Sahoo, ChunHong Huang, Niaz Banaei, Benjamin A Pinsky, Juan G Santiago. Proc Natl Acad Sci U S A 2020
89
13

iSCAN: An RT-LAMP-coupled CRISPR-Cas12 module for rapid, sensitive detection of SARS-CoV-2.
Zahir Ali, Rashid Aman, Ahmed Mahas, Gundra Sivakrishna Rao, Muhammad Tehseen, Tin Marsic, Rahul Salunke, Amit K Subudhi, Sharif M Hala, Samir M Hamdan,[...]. Virus Res 2020
104
12

Rapid and visual detection of 2019 novel coronavirus (SARS-CoV-2) by a reverse transcription loop-mediated isothermal amplification assay.
C Yan, J Cui, L Huang, B Du, L Chen, G Xue, S Li, W Zhang, L Zhao, Y Sun,[...]. Clin Microbiol Infect 2020
264
11

A new coronavirus associated with human respiratory disease in China.
Fan Wu, Su Zhao, Bin Yu, Yan-Mei Chen, Wen Wang, Zhi-Gang Song, Yi Hu, Zhao-Wu Tao, Jun-Hua Tian, Yuan-Yuan Pei,[...]. Nature 2020
11

Isothermal Amplification and Ambient Visualization in a Single Tube for the Detection of SARS-CoV-2 Using Loop-Mediated Amplification and CRISPR Technology.
Bo Pang, Jingyang Xu, Yanming Liu, Hanyong Peng, Wei Feng, Yiren Cao, Jinjun Wu, Huyan Xiao, Kanti Pabbaraju, Graham Tipples,[...]. Anal Chem 2020
67
16

SARS-CoV-2 detection with CRISPR diagnostics.
Lu Guo, Xuehan Sun, Xinge Wang, Chen Liang, Haiping Jiang, Qingqin Gao, Moyu Dai, Bin Qu, Sen Fang, Yihuan Mao,[...]. Cell Discov 2020
91
10

Cas12aVDet: A CRISPR/Cas12a-Based Platform for Rapid and Visual Nucleic Acid Detection.
Bei Wang, Rui Wang, Daqi Wang, Jian Wu, Jixi Li, Jin Wang, Huihui Liu, Yongming Wang. Anal Chem 2019
108
10

Detection of unamplified target genes via CRISPR-Cas9 immobilized on a graphene field-effect transistor.
Reza Hajian, Sarah Balderston, Thanhtra Tran, Tara deBoer, Jessy Etienne, Mandeep Sandhu, Noreen A Wauford, Jing-Yi Chung, Jolie Nokes, Mitre Athaiya,[...]. Nat Biomed Eng 2019
177
10

Rapid and sensitive detection of COVID-19 using CRISPR/Cas12a-based detection with naked eye readout, CRISPR/Cas12a-NER.
Xinjie Wang, Mingtian Zhong, Yong Liu, Peixiang Ma, Lu Dang, Qingzhou Meng, Wenwei Wan, Xiaodong Ma, Jia Liu, Guang Yang,[...]. Sci Bull (Beijing) 2020
77
12

RNA targeting with CRISPR-Cas13.
Omar O Abudayyeh, Jonathan S Gootenberg, Patrick Essletzbichler, Shuo Han, Julia Joung, Joseph J Belanto, Vanessa Verdine, David B T Cox, Max J Kellner, Aviv Regev,[...]. Nature 2017
751
10

RT-LAMP for rapid diagnosis of coronavirus SARS-CoV-2.
Wei E Huang, Boon Lim, Chia-Chen Hsu, Dan Xiong, Wei Wu, Yejiong Yu, Huidong Jia, Yun Wang, Yida Zeng, Mengmeng Ji,[...]. Microb Biotechnol 2020
210
10

Reverse Transcription Recombinase Polymerase Amplification Coupled with CRISPR-Cas12a for Facile and Highly Sensitive Colorimetric SARS-CoV-2 Detection.
Wei S Zhang, Jianbin Pan, Feng Li, Min Zhu, Mengting Xu, Hongyan Zhu, Yanyan Yu, Gaoxing Su. Anal Chem 2021
38
26

Contamination-free visual detection of SARS-CoV-2 with CRISPR/Cas12a: A promising method in the point-of-care detection.
Yanju Chen, Ya Shi, Yin Chen, Zhangnv Yang, Hui Wu, Zhihui Zhou, Jue Li, Jianfeng Ping, Luping He, Hong Shen,[...]. Biosens Bioelectron 2020
52
19

Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding.
Roujian Lu, Xiang Zhao, Juan Li, Peihua Niu, Bo Yang, Honglong Wu, Wenling Wang, Hao Song, Baoying Huang, Na Zhu,[...]. Lancet 2020
9

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
9

Ultrasensitive CRISPR-based diagnostic for field-applicable detection of Plasmodium species in symptomatic and asymptomatic malaria.
Rose A Lee, Helena De Puig, Peter Q Nguyen, Nicolaas M Angenent-Mari, Nina M Donghia, James P McGee, Jeffrey D Dvorin, Catherine M Klapperich, Nira R Pollock, James J Collins. Proc Natl Acad Sci U S A 2020
45
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.