A citation-based method for searching scientific literature

J van der Vaart, H Clevers. J Intern Med 2021
Times Cited: 29







List of co-cited articles
382 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Long-term expanding human airway organoids for disease modeling.
Norman Sachs, Angelos Papaspyropoulos, Domenique D Zomer-van Ommen, Inha Heo, Lena Böttinger, Dymph Klay, Fleur Weeber, Guizela Huelsz-Prince, Nino Iakobachvili, Gimano D Amatngalim,[...]. EMBO J 2019
308
62

Differentiated human airway organoids to assess infectivity of emerging influenza virus.
Jie Zhou, Cun Li, Norman Sachs, Man Chun Chiu, Bosco Ho-Yin Wong, Hin Chu, Vincent Kwok-Man Poon, Dong Wang, Xiaoyu Zhao, Lei Wen,[...]. Proc Natl Acad Sci U S A 2018
114
41

SARS-CoV-2 productively infects human gut enterocytes.
Mart M Lamers, Joep Beumer, Jelte van der Vaart, Kèvin Knoops, Jens Puschhof, Tim I Breugem, Raimond B G Ravelli, J Paul van Schayck, Anna Z Mykytyn, Hans Q Duimel,[...]. Science 2020
822
37

In vitro generation of human pluripotent stem cell derived lung organoids.
Briana R Dye, David R Hill, Michael A H Ferguson, Yu-Hwai Tsai, Melinda S Nagy, Rachel Dyal, James M Wells, Christopher N Mayhew, Roy Nattiv, Ophir D Klein,[...]. Elife 2015
402
34

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor.
Markus Hoffmann, Hannah Kleine-Weber, Simon Schroeder, Nadine Krüger, Tanja Herrler, Sandra Erichsen, Tobias S Schiergens, Georg Herrler, Nai-Huei Wu, Andreas Nitsche,[...]. Cell 2020
34

Differentiation of Human Pluripotent Stem Cells into Functional Lung Alveolar Epithelial Cells.
Anjali Jacob, Michael Morley, Finn Hawkins, Katherine B McCauley, J C Jean, Hillary Heins, Cheng-Lun Na, Timothy E Weaver, Marall Vedaie, Killian Hurley,[...]. Cell Stem Cell 2017
205
31

Progenitor identification and SARS-CoV-2 infection in human distal lung organoids.
Ameen A Salahudeen, Shannon S Choi, Arjun Rustagi, Junjie Zhu, Vincent van Unen, Sean M de la O, Ryan A Flynn, Mar Margalef-Català, António J M Santos, Jihang Ju,[...]. Nature 2020
103
31

Identification of SARS-CoV-2 inhibitors using lung and colonic organoids.
Yuling Han, Xiaohua Duan, Liuliu Yang, Benjamin E Nilsson-Payant, Pengfei Wang, Fuyu Duan, Xuming Tang, Tomer M Yaron, Tuo Zhang, Skyler Uhl,[...]. Nature 2021
199
31

A three-dimensional model of human lung development and disease from pluripotent stem cells.
Ya-Wen Chen, Sarah Xuelian Huang, Ana Luisa Rodrigues Toste de Carvalho, Siu-Hong Ho, Mohammad Naimul Islam, Stefano Volpi, Luigi D Notarangelo, Michael Ciancanelli, Jean-Laurent Casanova, Jahar Bhattacharya,[...]. Nat Cell Biol 2017
265
31

Efficient generation of lung and airway epithelial cells from human pluripotent stem cells.
Sarah X L Huang, Mohammad Naimul Islam, John O'Neill, Zheng Hu, Yong-Guang Yang, Ya-Wen Chen, Melanie Mumau, Michael D Green, Gordana Vunjak-Novakovic, Jahar Bhattacharya,[...]. Nat Biotechnol 2014
344
31


Efficient Derivation of Functional Human Airway Epithelium from Pluripotent Stem Cells via Temporal Regulation of Wnt Signaling.
Katherine B McCauley, Finn Hawkins, Maria Serra, Dylan C Thomas, Anjali Jacob, Darrell N Kotton. Cell Stem Cell 2017
196
27

An organoid-derived bronchioalveolar model for SARS-CoV-2 infection of human alveolar type II-like cells.
Mart M Lamers, Jelte van der Vaart, Kèvin Knoops, Samra Riesebosch, Tim I Breugem, Anna Z Mykytyn, Joep Beumer, Debby Schipper, Karel Bezstarosti, Charlotte D Koopman,[...]. EMBO J 2021
67
27

Directed Induction of Functional Multi-ciliated Cells in Proximal Airway Epithelial Spheroids from Human Pluripotent Stem Cells.
Satoshi Konishi, Shimpei Gotoh, Kazuhiro Tateishi, Yuki Yamamoto, Yohei Korogi, Tadao Nagasaki, Hisako Matsumoto, Shigeo Muro, Toyohiro Hirai, Isao Ito,[...]. Stem Cell Reports 2016
106
27

Lung organoids: current uses and future promise.
Christina E Barkauskas, Mei-I Chung, Bryan Fioret, Xia Gao, Hiroaki Katsura, Brigid L M Hogan. Development 2017
174
27

SARS-CoV-2 Reverse Genetics Reveals a Variable Infection Gradient in the Respiratory Tract.
Yixuan J Hou, Kenichi Okuda, Caitlin E Edwards, David R Martinez, Takanori Asakura, Kenneth H Dinnon, Takafumi Kato, Rhianna E Lee, Boyd L Yount, Teresa M Mascenik,[...]. Cell 2020
673
24

Generation of lung organoids from human pluripotent stem cells in vitro.
Alyssa J Miller, Briana R Dye, Daysha Ferrer-Torres, David R Hill, Arend W Overeem, Lonnie D Shea, Jason R Spence. Nat Protoc 2019
131
24

Patient-derived lung cancer organoids as in vitro cancer models for therapeutic screening.
Minsuh Kim, Hyemin Mun, Chang Oak Sung, Eun Jeong Cho, Hye-Joon Jeon, Sung-Min Chun, Da Jung Jung, Tae Hoon Shin, Gi Seok Jeong, Dong Kwan Kim,[...]. Nat Commun 2019
188
20

Modeling of Fibrotic Lung Disease Using 3D Organoids Derived from Human Pluripotent Stem Cells.
Alexandros Strikoudis, Anna Cieślak, Lucas Loffredo, Ya-Wen Chen, Nina Patel, Anjali Saqi, David J Lederer, Hans-Willem Snoeck. Cell Rep 2019
79
20

Long-term expansion of alveolar stem cells derived from human iPS cells in organoids.
Yuki Yamamoto, Shimpei Gotoh, Yohei Korogi, Masahide Seki, Satoshi Konishi, Satoshi Ikeo, Naoyuki Sone, Tadao Nagasaki, Hisako Matsumoto, Shigeo Muro,[...]. Nat Methods 2017
106
20

Basal cells as stem cells of the mouse trachea and human airway epithelium.
Jason R Rock, Mark W Onaitis, Emma L Rawlins, Yun Lu, Cheryl P Clark, Yan Xue, Scott H Randell, Brigid L M Hogan. Proc Natl Acad Sci U S A 2009
897
20

SARS-CoV-2 Infection of Pluripotent Stem Cell-Derived Human Lung Alveolar Type 2 Cells Elicits a Rapid Epithelial-Intrinsic Inflammatory Response.
Jessie Huang, Adam J Hume, Kristine M Abo, Rhiannon B Werder, Carlos Villacorta-Martin, Konstantinos-Dionysios Alysandratos, Mary Lou Beermann, Chantelle Simone-Roach, Jonathan Lindstrom-Vautrin, Judith Olejnik,[...]. Cell Stem Cell 2020
138
20


Oral Mucosal Organoids as a Potential Platform for Personalized Cancer Therapy.
Else Driehuis, Sigrid Kolders, Sacha Spelier, Kadi Lõhmussaar, Stefan M Willems, Lot A Devriese, Remco de Bree, Emma J de Ruiter, Jeroen Korving, Harry Begthel,[...]. Cancer Discov 2019
115
17

Identification of Candidate COVID-19 Therapeutics using hPSC-derived Lung Organoids.
Yuling Han, Liuliu Yang, Xiaohua Duan, Fuyu Duan, Benjamin E Nilsson-Payant, Tomer M Yaron, Pengfei Wang, Xuming Tang, Tuo Zhang, Zeping Zhao,[...]. bioRxiv 2020
57
17


SARS-CoV-2 infection of primary human lung epithelium for COVID-19 modeling and drug discovery.
A Mulay, B Konda, G Garcia, C Yao, S Beil, C Sen, A Purkayastha, J K Kolls, D A Pociask, P Pessina,[...]. bioRxiv 2020
34
17

Generation of alveolar epithelial spheroids via isolated progenitor cells from human pluripotent stem cells.
Shimpei Gotoh, Isao Ito, Tadao Nagasaki, Yuki Yamamoto, Satoshi Konishi, Yohei Korogi, Hisako Matsumoto, Shigeo Muro, Toyohiro Hirai, Michinori Funato,[...]. Stem Cell Reports 2014
128
17

Authentic Modeling of Human Respiratory Virus Infection in Human Pluripotent Stem Cell-Derived Lung Organoids.
M Porotto, M Ferren, Y-W Chen, Y Siu, N Makhsous, B Rima, T Briese, A L Greninger, H-W Snoeck, A Moscona. mBio 2019
66
17

BMP signaling and cellular dynamics during regeneration of airway epithelium from basal progenitors.
Tomomi Tadokoro, Xia Gao, Charles C Hong, Danielle Hotten, Brigid L M Hogan. Development 2016
80
17

Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche.
Toshiro Sato, Robert G Vries, Hugo J Snippert, Marc van de Wetering, Nick Barker, Daniel E Stange, Johan H van Es, Arie Abo, Pekka Kujala, Peter J Peters,[...]. Nature 2009
17

Directed differentiation of human pluripotent stem cells into mature airway epithelia expressing functional CFTR protein.
Amy P Wong, Christine E Bear, Stephanie Chin, Peter Pasceri, Tadeo O Thompson, Ling-Jun Huan, Felix Ratjen, James Ellis, Janet Rossant. Nat Biotechnol 2012
253
17

Optimization of Normal Human Bronchial Epithelial (NHBE) Cell 3D Cultures for in vitro Lung Model Studies.
Rachael E Rayner, Patrudu Makena, Gaddamanugu L Prasad, Estelle Cormet-Boyaka. Sci Rep 2019
62
17

Reconstituting organ-level lung functions on a chip.
Dongeun Huh, Benjamin D Matthews, Akiko Mammoto, Martín Montoya-Zavala, Hong Yuan Hsin, Donald E Ingber. Science 2010
17

Inhibition of SARS-CoV-2 Infections in Engineered Human Tissues Using Clinical-Grade Soluble Human ACE2.
Vanessa Monteil, Hyesoo Kwon, Patricia Prado, Astrid Hagelkrüys, Reiner A Wimmer, Martin Stahl, Alexandra Leopoldi, Elena Garreta, Carmen Hurtado Del Pozo, Felipe Prosper,[...]. Cell 2020
17

Type 2 alveolar cells are stem cells in adult lung.
Christina E Barkauskas, Michael J Cronce, Craig R Rackley, Emily J Bowie, Douglas R Keene, Barry R Stripp, Scott H Randell, Paul W Noble, Brigid L M Hogan. J Clin Invest 2013
817
17

Three-Dimensional Human Alveolar Stem Cell Culture Models Reveal Infection Response to SARS-CoV-2.
Jeonghwan Youk, Taewoo Kim, Kelly V Evans, Young-Il Jeong, Yongsuk Hur, Seon Pyo Hong, Je Hyoung Kim, Kijong Yi, Su Yeon Kim, Kwon Joong Na,[...]. Cell Stem Cell 2020
86
17

SARS-CoV-2 infection of primary human lung epithelium for COVID-19 modeling and drug discovery.
Apoorva Mulay, Bindu Konda, Gustavo Garcia, Changfu Yao, Stephen Beil, Jaquelyn M Villalba, Colin Koziol, Chandani Sen, Arunima Purkayastha, Jay K Kolls,[...]. Cell Rep 2021
66
17

Human airway organoid engineering as a step toward lung regeneration and disease modeling.
Qi Tan, Kyoung Moo Choi, Delphine Sicard, Daniel J Tschumperlin. Biomaterials 2017
74
13

Using Lung Organoids to Investigate Epithelial Barrier Complexity and IL-17 Signaling During Respiratory Infection.
Giuseppe Paolicelli, Antonella De Luca, Shyam S Jose, Martina Antonini, Irene Teloni, Jan Fric, Teresa Zelante. Front Immunol 2019
14
28

Use of three-dimensional organoids and lung-on-a-chip methods to study lung development, regeneration and disease.
Konstantinos Gkatzis, Sara Taghizadeh, Dongeun Huh, Didier Y R Stainier, Saverio Bellusci. Eur Respir J 2018
60
13

Lung Organoids and Their Use To Study Cell-Cell Interaction.
Marko Z Nikolić, Emma L Rawlins. Curr Pathobiol Rep 2017
35
13

Spatiotemporal organization of cilia drives multiscale mucus swirls in model human bronchial epithelium.
Mustapha-Kamel Khelloufi, Etienne Loiseau, Marc Jaeger, Nicolas Molinari, Pascal Chanez, Delphine Gras, Annie Viallat. Sci Rep 2018
18
22

Inflammatory Signals Induce AT2 Cell-Derived Damage-Associated Transient Progenitors that Mediate Alveolar Regeneration.
Jinwook Choi, Jong-Eun Park, Georgia Tsagkogeorga, Motoko Yanagita, Bon-Kyoung Koo, Namshik Han, Joo-Hyeon Lee. Cell Stem Cell 2020
84
13

ACE2 receptor expression and severe acute respiratory syndrome coronavirus infection depend on differentiation of human airway epithelia.
Hong Peng Jia, Dwight C Look, Lei Shi, Melissa Hickey, Lecia Pewe, Jason Netland, Michael Farzan, Christine Wohlford-Lenane, Stanley Perlman, Paul B McCray. J Virol 2005
502
13

Modeling COVID-19 with Human Pluripotent Stem Cell-Derived Cells Reveals Synergistic Effects of Anti-inflammatory Macrophages with ACE2 Inhibition Against SARS-CoV-2.
Fuyu Duan, Liyan Guo, Liuliu Yang, Yuling Han, Abhimanyu Thakur, Benjamin E Nilsson-Payant, Pengfei Wang, Zhao Zhang, Chui Yan Ma, Xiaoya Zhou,[...]. Res Sq 2020
22
18

Tissue-Specific stem cell differentiation in an in vitro airway model.
Zoë Prytherch, Claire Job, Hilary Marshall, Victor Oreffo, Martyn Foster, Kelly BéruBé. Macromol Biosci 2011
44
13

Do airway epithelium air-liquid cultures represent the in vivo airway epithelium transcriptome?
Anna Dvorak, Ann E Tilley, Renat Shaykhiev, Rui Wang, Ronald G Crystal. Am J Respir Cell Mol Biol 2011
101
13

Derivation of self-renewing lung alveolar epithelial type II cells from human pluripotent stem cells.
Anjali Jacob, Marall Vedaie, David A Roberts, Dylan C Thomas, Carlos Villacorta-Martin, Konstantinos-Dionysios Alysandratos, Finn Hawkins, Darrell N Kotton. Nat Protoc 2019
60
13

The role of Scgb1a1+ Clara cells in the long-term maintenance and repair of lung airway, but not alveolar, epithelium.
Emma L Rawlins, Tadashi Okubo, Yan Xue, David M Brass, Richard L Auten, Hiroshi Hasegawa, Fan Wang, Brigid L M Hogan. Cell Stem Cell 2009
535
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.