A citation-based method for searching scientific literature

Ellen Heitzer, Lisa Auinger, Michael R Speicher. Trends Mol Med 2020
Times Cited: 64







List of co-cited articles
571 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin.
Matthew W Snyder, Martin Kircher, Andrew J Hill, Riza M Daza, Jay Shendure. Cell 2016
663
40

DNA fragments in the blood plasma of cancer patients: quantitations and evidence for their origin from apoptotic and necrotic cells.
S Jahr, H Hentze, S Englisch, D Hardt, F O Fackelmayer, R D Hesch, R Knippers. Cancer Res 2001
34

Genome-wide cell-free DNA fragmentation in patients with cancer.
Stephen Cristiano, Alessandro Leal, Jillian Phallen, Jacob Fiksel, Vilmos Adleff, Daniel C Bruhm, Sarah Østrup Jensen, Jamie E Medina, Carolyn Hruban, James R White,[...]. Nature 2019
387
34

Detection of circulating tumor DNA in early- and late-stage human malignancies.
Chetan Bettegowda, Mark Sausen, Rebecca J Leary, Isaac Kinde, Yuxuan Wang, Nishant Agrawal, Bjarne R Bartlett, Hao Wang, Brandon Luber, Rhoda M Alani,[...]. Sci Transl Med 2014
29

Comprehensive human cell-type methylation atlas reveals origins of circulating cell-free DNA in health and disease.
Joshua Moss, Judith Magenheim, Daniel Neiman, Hai Zemmour, Netanel Loyfer, Amit Korach, Yaacov Samet, Myriam Maoz, Henrik Druid, Peter Arner,[...]. Nat Commun 2018
294
28

Enhanced detection of circulating tumor DNA by fragment size analysis.
Florent Mouliere, Dineika Chandrananda, Anna M Piskorz, Elizabeth K Moore, James Morris, Lise Barlebo Ahlborn, Richard Mair, Teodora Goranova, Francesco Marass, Katrin Heider,[...]. Sci Transl Med 2018
391
28

Life and death of circulating cell-free DNA.
Anatoli Kustanovich, Ruth Schwartz, Tamar Peretz, Albert Grinshpun. Cancer Biol Ther 2019
177
26

Liquid biopsies come of age: towards implementation of circulating tumour DNA.
Jonathan C M Wan, Charles Massie, Javier Garcia-Corbacho, Florent Mouliere, James D Brenton, Carlos Caldas, Simon Pacey, Richard Baird, Nitzan Rosenfeld. Nat Rev Cancer 2017
25

Lengthening and shortening of plasma DNA in hepatocellular carcinoma patients.
Peiyong Jiang, Carol W M Chan, K C Allen Chan, Suk Hang Cheng, John Wong, Vincent Wai-Sun Wong, Grace L H Wong, Stephen L Chan, Tony S K Mok, Henry L Y Chan,[...]. Proc Natl Acad Sci U S A 2015
383
23

Inferring expressed genes by whole-genome sequencing of plasma DNA.
Peter Ulz, Gerhard G Thallinger, Martina Auer, Ricarda Graf, Karl Kashofer, Stephan W Jahn, Luca Abete, Gunda Pristauz, Edgar Petru, Jochen B Geigl,[...]. Nat Genet 2016
180
23

Fragment Length of Circulating Tumor DNA.
Hunter R Underhill, Jacob O Kitzman, Sabine Hellwig, Noah C Welker, Riza Daza, Daniel N Baker, Keith M Gligorich, Robert C Rostomily, Mary P Bronner, Jay Shendure. PLoS Genet 2016
357
21

Circulating mutant DNA to assess tumor dynamics.
Frank Diehl, Kerstin Schmidt, Michael A Choti, Katharine Romans, Steven Goodman, Meng Li, Katherine Thornton, Nishant Agrawal, Lori Sokoll, Steve A Szabo,[...]. Nat Med 2008
20

High fragmentation characterizes tumour-derived circulating DNA.
Florent Mouliere, Bruno Robert, Erika Arnau Peyrotte, Maguy Del Rio, Marc Ychou, Franck Molina, Celine Gongora, Alain R Thierry. PLoS One 2011
327
20

Origins, structures, and functions of circulating DNA in oncology.
A R Thierry, S El Messaoudi, P B Gahan, P Anker, M Stroun. Cancer Metastasis Rev 2016
395
20

Identification of tissue-specific cell death using methylation patterns of circulating DNA.
Roni Lehmann-Werman, Daniel Neiman, Hai Zemmour, Joshua Moss, Judith Magenheim, Adi Vaknin-Dembinsky, Sten Rubertsson, Bengt Nellgård, Kaj Blennow, Henrik Zetterberg,[...]. Proc Natl Acad Sci U S A 2016
342
20

Detection and localization of surgically resectable cancers with a multi-analyte blood test.
Joshua D Cohen, Lu Li, Yuxuan Wang, Christopher Thoburn, Bahman Afsari, Ludmila Danilova, Christopher Douville, Ammar A Javed, Fay Wong, Austin Mattox,[...]. Science 2018
20

Nuclear Acids In Human Blood Plasma.
P MANDEL, P METAIS. C R Seances Soc Biol Fil 1948
638
18

Integrating genomic features for non-invasive early lung cancer detection.
Jacob J Chabon, Emily G Hamilton, David M Kurtz, Mohammad S Esfahani, Everett J Moding, Henning Stehr, Joseph Schroers-Martin, Barzin Y Nabet, Binbin Chen, Aadel A Chaudhuri,[...]. Nature 2020
179
18

Orientation-aware plasma cell-free DNA fragmentation analysis in open chromatin regions informs tissue of origin.
Kun Sun, Peiyong Jiang, Suk Hang Cheng, Timothy H T Cheng, John Wong, Vincent W S Wong, Simon S M Ng, Brigette B Y Ma, Tak Y Leung, Stephen L Chan,[...]. Genome Res 2019
98
17

Current and future perspectives of liquid biopsies in genomics-driven oncology.
Ellen Heitzer, Imran S Haque, Charles E S Roberts, Michael R Speicher. Nat Rev Genet 2019
534
17


Maternal plasma DNA sequencing reveals the genome-wide genetic and mutational profile of the fetus.
Y M Dennis Lo, K C Allen Chan, Hao Sun, Eric Z Chen, Peiyong Jiang, Fiona M F Lun, Yama W Zheng, Tak Y Leung, Tze K Lau, Charles R Cantor,[...]. Sci Transl Med 2010
651
15

Free DNA in the serum of cancer patients and the effect of therapy.
S A Leon, B Shapiro, D M Sklaroff, M J Yaros. Cancer Res 1977
15

Senescence, Necrosis, and Apoptosis Govern Circulating Cell-free DNA Release Kinetics.
Ariana Rostami, Meghan Lambie, Caberry W Yu, Vuk Stambolic, John N Waldron, Scott V Bratman. Cell Rep 2020
49
20

Dnase1l3 deletion causes aberrations in length and end-motif frequencies in plasma DNA.
Lee Serpas, Rebecca W Y Chan, Peiyong Jiang, Meng Ni, Kun Sun, Ali Rashidfarrokhi, Chetna Soni, Vanja Sisirak, Wing-Shan Lee, Suk Hang Cheng,[...]. Proc Natl Acad Sci U S A 2019
78
15

The emerging role of cell-free DNA as a molecular marker for cancer management.
Abel Jacobus Bronkhorst, Vida Ungerer, Stefan Holdenrieder. Biomol Detect Quantif 2019
208
15

Plasma DNA tissue mapping by genome-wide methylation sequencing for noninvasive prenatal, cancer, and transplantation assessments.
Kun Sun, Peiyong Jiang, K C Allen Chan, John Wong, Yvonne K Y Cheng, Raymond H S Liang, Wai-kong Chan, Edmond S K Ma, Stephen L Chan, Suk Hang Cheng,[...]. Proc Natl Acad Sci U S A 2015
382
15

Plasma DNA End-Motif Profiling as a Fragmentomic Marker in Cancer, Pregnancy, and Transplantation.
Peiyong Jiang, Kun Sun, Wenlei Peng, Suk Hang Cheng, Meng Ni, Philip C Yeung, Macy M S Heung, Tingting Xie, Huimin Shang, Ze Zhou,[...]. Cancer Discov 2020
60
16

Detection and quantification of mutations in the plasma of patients with colorectal tumors.
Frank Diehl, Meng Li, Devin Dressman, Yiping He, Dong Shen, Steve Szabo, Luis A Diaz, Steven N Goodman, Kerstin A David, Hartmut Juhl,[...]. Proc Natl Acad Sci U S A 2005
808
14

The diverse origins of circulating cell-free DNA in the human body: a critical re-evaluation of the literature.
Janine Aucamp, Abel J Bronkhorst, Christoffel P S Badenhorst, Piet J Pretorius. Biol Rev Camb Philos Soc 2018
126
14


Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution.
Christopher Abbosh, Nicolai J Birkbak, Gareth A Wilson, Mariam Jamal-Hanjani, Tudor Constantin, Raheleh Salari, John Le Quesne, David A Moore, Selvaraju Veeriah, Rachel Rosenthal,[...]. Nature 2017
864
14

Predominant hematopoietic origin of cell-free DNA in plasma and serum after sex-mismatched bone marrow transplantation.
Yanni Y N Lui, Ki-Wai Chik, Rossa W K Chiu, Cheong-Yip Ho, Christopher W K Lam, Y M Dennis Lo. Clin Chem 2002
302
12

Clinical relevance of blood-based ctDNA analysis: mutation detection and beyond.
Laura Keller, Yassine Belloum, Harriet Wikman, Klaus Pantel. Br J Cancer 2021
115
12

Scalable whole-exome sequencing of cell-free DNA reveals high concordance with metastatic tumors.
Viktor A Adalsteinsson, Gavin Ha, Samuel S Freeman, Atish D Choudhury, Daniel G Stover, Heather A Parsons, Gregory Gydush, Sarah C Reed, Denisse Rotem, Justin Rhoades,[...]. Nat Commun 2017
348
12

About the possible origin and mechanism of circulating DNA apoptosis and active DNA release.
M Stroun, J Lyautey, C Lederrey, A Olson-Sand, P Anker. Clin Chim Acta 2001
510
12

Sensitive tumour detection and classification using plasma cell-free DNA methylomes.
Shu Yi Shen, Rajat Singhania, Gordon Fehringer, Ankur Chakravarthy, Michael H A Roehrl, Dianne Chadwick, Philip C Zuzarte, Ayelet Borgida, Ting Ting Wang, Tiantian Li,[...]. Nature 2018
366
12

Inference of transcription factor binding from cell-free DNA enables tumor subtype prediction and early detection.
Peter Ulz, Samantha Perakis, Qing Zhou, Tina Moser, Jelena Belic, Isaac Lazzeri, Albert Wölfler, Armin Zebisch, Armin Gerger, Gunda Pristauz,[...]. Nat Commun 2019
68
12

Genome-wide cell-free DNA mutational integration enables ultra-sensitive cancer monitoring.
Asaf Zviran, Rafael C Schulman, Minita Shah, Steven T K Hill, Sunil Deochand, Cole C Khamnei, Dillon Maloney, Kristofer Patel, Will Liao, Adam J Widman,[...]. Nat Med 2020
92
12

Preferred end coordinates and somatic variants as signatures of circulating tumor DNA associated with hepatocellular carcinoma.
Peiyong Jiang, Kun Sun, Yu K Tong, Suk Hang Cheng, Timothy H T Cheng, Macy M S Heung, John Wong, Vincent W S Wong, Henry L Y Chan, K C Allen Chan,[...]. Proc Natl Acad Sci U S A 2018
85
12

Epigenetics, fragmentomics, and topology of cell-free DNA in liquid biopsies.
Y M Dennis Lo, Diana S C Han, Peiyong Jiang, Rossa W K Chiu. Science 2021
85
12

High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants.
Pedram Razavi, Bob T Li, David N Brown, Byoungsok Jung, Earl Hubbell, Ronglai Shen, Wassim Abida, Krishna Juluru, Ino De Bruijn, Chenlu Hou,[...]. Nat Med 2019
308
10

Cell-free nucleic acids as biomarkers in cancer patients.
Heidi Schwarzenbach, Dave S B Hoon, Klaus Pantel. Nat Rev Cancer 2011
10


Early Detection of Molecular Residual Disease in Localized Lung Cancer by Circulating Tumor DNA Profiling.
Aadel A Chaudhuri, Jacob J Chabon, Alexander F Lovejoy, Aaron M Newman, Henning Stehr, Tej D Azad, Michael S Khodadoust, Mohammad Shahrokh Esfahani, Chih Long Liu, Li Zhou,[...]. Cancer Discov 2017
434
10

Liquid biopsies: genotyping circulating tumor DNA.
Luis A Diaz, Alberto Bardelli. J Clin Oncol 2014
10

Cell-free DNA in human blood plasma: length measurements in patients with pancreatic cancer and healthy controls.
M B Giacona, G C Ruben, K A Iczkowski, T B Roos, D M Porter, G D Sorenson. Pancreas 1998
298
10

Characterization of the cell-free DNA released by cultured cancer cells.
Abel Jacobus Bronkhorst, Johannes F Wentzel, Janine Aucamp, Etresia van Dyk, Lissinda du Plessis, Piet J Pretorius. Biochim Biophys Acta 2016
111
10

Double-stranded DNA in exosomes: a novel biomarker in cancer detection.
Basant Kumar Thakur, Haiying Zhang, Annette Becker, Irina Matei, Yujie Huang, Bruno Costa-Silva, Yan Zheng, Ayuko Hoshino, Helene Brazier, Jenny Xiang,[...]. Cell Res 2014
977
10

The Biology of Cell-free DNA Fragmentation and the Roles of DNASE1, DNASE1L3, and DFFB.
Diana S C Han, Meng Ni, Rebecca W Y Chan, Vicken W H Chan, Kathy O Lui, Rossa W K Chiu, Y M Dennis Lo. Am J Hum Genet 2020
61
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.