A citation-based method for searching scientific literature

Aghil Soman, Chong Wai Liew, Hsiang Ling Teo, Nikolay V Berezhnoy, Vincent Olieric, Nikolay Korolev, Daniela Rhodes, Lars Nordenskiöld. Nucleic Acids Res 2020
Times Cited: 6







List of co-cited articles
6 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Crystal structure of the nucleosome core particle at 2.8 A resolution.
K Luger, A W Mäder, R K Richmond, D F Sargent, T J Richmond. Nature 1997
50


The conformation of the histone H3 tail inhibits association of the BPTF PHD finger with the nucleosome.
Emma A Morrison, Samuel Bowerman, Kelli L Sylvers, Jeff Wereszczynski, Catherine A Musselman. Elife 2018
38
33

Histone octamer rearranges to adapt to DNA unwrapping.
Silvija Bilokapic, Mike Strauss, Mario Halic. Nat Struct Mol Biol 2018
72
33


A standard reference frame for the description of nucleic acid base-pair geometry.
W K Olson, M Bansal, S K Burley, R E Dickerson, M Gerstein, S C Harvey, U Heinemann, X J Lu, S Neidle, Z Shakked,[...]. J Mol Biol 2001
376
33

Atomic resolution cryo-EM structure of a native-like CENP-A nucleosome aided by an antibody fragment.
Bing-Rui Zhou, K N Sathish Yadav, Mario Borgnia, Jingjun Hong, Baohua Cao, Ada L Olins, Donald E Olins, Yawen Bai, Ping Zhang. Nat Commun 2019
29
16

Structural Features of Transcription Factors Associating with Nucleosome Binding.
Meilin Fernandez Garcia, Cedric D Moore, Katharine N Schulz, Oscar Alberto, Greg Donague, Melissa M Harrison, Heng Zhu, Kenneth S Zaret. Mol Cell 2019
47
16

Interdomain Communication of the Chd1 Chromatin Remodeler across the DNA Gyres of the Nucleosome.
Ilana M Nodelman, Franziska Bleichert, Ashok Patel, Ren Ren, Kyle C Horvath, James M Berger, Gregory D Bowman. Mol Cell 2017
42
16

3.9 Å structure of the nucleosome core particle determined by phase-plate cryo-EM.
Eugene Y D Chua, Vinod K Vogirala, Oviya Inian, Andrew S W Wong, Lars Nordenskiöld, Juergen M Plitzko, Radostin Danev, Sara Sandin. Nucleic Acids Res 2016
47
16

Domain architecture of the catalytic subunit in the ISW2-nucleosome complex.
Weiwei Dang, Blaine Bartholomew. Mol Cell Biol 2007
86
16

Nucleosome binding by the pioneer transcription factor OCT4.
Kenta Echigoya, Masako Koyama, Lumi Negishi, Yoshimasa Takizawa, Yuka Mizukami, Hideki Shimabayashi, Akari Kuroda, Hitoshi Kurumizaka. Sci Rep 2020
10
16

Nucleosome-Chd1 structure and implications for chromatin remodelling.
Lucas Farnung, Seychelle M Vos, Christoph Wigge, Patrick Cramer. Nature 2017
108
16

The structure of DNA in the nucleosome core.
Timothy J Richmond, Curt A Davey. Nature 2003
761
16

Nucleosome structural studies.
Song Tan, Curt A Davey. Curr Opin Struct Biol 2011
91
16


X-ray diffraction analysis of crystals containing twofold symmetric nucleosome core particles.
J M Harp, E C Uberbacher, A E Roberson, E L Palmer, A Gewiess, G J Bunick. Acta Crystallogr D Biol Crystallogr 1996
25
16

Spheroid chromatin units (v bodies).
A L Olins, D E Olins. Science 1974
16

Structural Mechanisms of Nucleosome Recognition by Linker Histones.
Bing-Rui Zhou, Jiansheng Jiang, Hanqiao Feng, Rodolfo Ghirlando, T Sam Xiao, Yawen Bai. Mol Cell 2015
120
16

Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1.
Jan Bednar, Isabel Garcia-Saez, Ramachandran Boopathi, Amber R Cutter, Gabor Papai, Anna Reymer, Sajad H Syed, Imtiaz Nisar Lone, Ognyan Tonchev, Corinne Crucifix,[...]. Mol Cell 2017
108
16

An epichromatin epitope: persistence in the cell cycle and conservation in evolution.
Ada L Olins, Markus Langhans, Marc Monestier, Andreas Schlotterer, David G Robinson, Corrado Viotti, Hanswalter Zentgraf, Monika Zwerger, Donald E Olins. Nucleus 2011
21
16

Structures of the ISWI-nucleosome complex reveal a conserved mechanism of chromatin remodeling.
Lijuan Yan, Hao Wu, Xuemei Li, Ning Gao, Zhucheng Chen. Nat Struct Mol Biol 2019
41
16

X-ray structure of the MMTV-A nucleosome core.
Timothy D Frouws, Sylwia C Duda, Timothy J Richmond. Proc Natl Acad Sci U S A 2016
23
16

Specificity of monoclonal anti-nucleosome auto-antibodies derived from lupus mice.
K Kramers, C Stemmer, M Monestier, M C van Bruggen, T P Rijke-Schilder, M N Hylkema, R J Smeenk, S Muller, J H Berden. J Autoimmun 1996
32
16

DNA stretching and extreme kinking in the nucleosome core.
Michelle S Ong, Timothy J Richmond, Curt A Davey. J Mol Biol 2007
99
16

Pioneer transcription factors target partial DNA motifs on nucleosomes to initiate reprogramming.
Abdenour Soufi, Meilin Fernandez Garcia, Artur Jaroszewicz, Nebiyu Osman, Matteo Pellegrini, Kenneth S Zaret. Cell 2015
335
16

Molecular basis of CENP-C association with the CENP-A nucleosome at yeast centromeres.
Hua Xiao, Feng Wang, Jan Wisniewski, Alexey K Shaytan, Rodolfo Ghirlando, Peter C FitzGerald, Yingzi Huang, Debbie Wei, Shipeng Li, David Landsman,[...]. Genes Dev 2017
26
16

Mechanism of chromatin remodelling revealed by the Snf2-nucleosome structure.
Xiaoyu Liu, Meijing Li, Xian Xia, Xueming Li, Zhucheng Chen. Nature 2017
114
16

Structure of the primed state of the ATPase domain of chromatin remodeling factor ISWI bound to the nucleosome.
Sagar Chittori, Jingjun Hong, Yawen Bai, Sriram Subramaniam. Nucleic Acids Res 2019
10
16

Cryo-EM structure of the nucleosome containing the ALB1 enhancer DNA sequence.
Yoshimasa Takizawa, Hiroki Tanaka, Shinichi Machida, Masako Koyama, Kazumitsu Maehara, Yasuyuki Ohkawa, Paul A Wade, Matthias Wolf, Hitoshi Kurumizaka. Open Biol 2018
12
16

Structural basis for retroviral integration into nucleosomes.
Daniel P Maskell, Ludovic Renault, Erik Serrao, Paul Lesbats, Rishi Matadeen, Stephen Hare, Dirk Lindemann, Alan N Engelman, Alessandro Costa, Peter Cherepanov. Nature 2015
91
16

Chemical shift referencing in MAS solid state NMR.
Corey R Morcombe, Kurt W Zilm. J Magn Reson 2003
418
16

Cryo-EM structures of remodeler-nucleosome intermediates suggest allosteric control through the nucleosome.
Jean Paul Armache, Nathan Gamarra, Stephanie L Johnson, John D Leonard, Shenping Wu, Geeta J Narlikar, Yifan Cheng. Elife 2019
30
16

Frameworks for understanding long-range intra-protein communication.
Matthew J Whitley, Andrew L Lee. Curr Protein Pept Sci 2009
53
16


Solid-state NMR 13C, 15N assignments of human histone H3 in the nucleosome core particle.
Xiangyan Shi, Chinmayi Prasanna, Konstantin Pervushin, Lars Nordenskiöld. Biomol NMR Assign 2020
1
100

Histone H3 and H4 N-terminal tails in nucleosome arrays at cellular concentrations probed by magic angle spinning NMR spectroscopy.
Min Gao, Philippe S Nadaud, Morgan W Bernier, Justin A North, P Chris Hammel, Michael G Poirier, Christopher P Jaroniec. J Am Chem Soc 2013
46
16

Intra- and inter-nucleosomal interactions of the histone H4 tail revealed with a human nucleosome core particle with genetically-incorporated H4 tetra-acetylation.
Masatoshi Wakamori, Yoshifumi Fujii, Noriyuki Suka, Mikako Shirouzu, Kensaku Sakamoto, Takashi Umehara, Shigeyuki Yokoyama. Sci Rep 2015
40
16




SIMPSON: a general simulation program for solid-state NMR spectroscopy.
M Bak, J T Rasmussen, N C Nielsen. J Magn Reson 2000
927
16

CENP-C directs a structural transition of CENP-A nucleosomes mainly through sliding of DNA gyres.
Samantha J Falk, Jaehyoun Lee, Nikolina Sekulic, Michael A Sennett, Tae-Hee Lee, Ben E Black. Nat Struct Mol Biol 2016
52
16

Structural rearrangements of the histone octamer translocate DNA.
Silvija Bilokapic, Mike Strauss, Mario Halic. Nat Commun 2018
36
16

Modification of the histone tetramer at the H3-H3 interface impacts tetrasome conformations and dynamics.
Orkide Ordu, Leopold Kremser, Alexandra Lusser, Nynke H Dekker. J Chem Phys 2018
9
16


Organismal differences in post-translational modifications in histones H3 and H4.
Benjamin A Garcia, Sandra B Hake, Robert L Diaz, Monika Kauer, Stephanie A Morris, Judith Recht, Jeffrey Shabanowitz, Nilamadhab Mishra, Brian D Strahl, C David Allis,[...]. J Biol Chem 2007
218
16

Regulated nucleosome mobility and the histone code.
Michael S Cosgrove, Jef D Boeke, Cynthia Wolberger. Nat Struct Mol Biol 2004
242
16

NMRPipe: a multidimensional spectral processing system based on UNIX pipes.
F Delaglio, S Grzesiek, G W Vuister, G Zhu, J Pfeifer, A Bax. J Biomol NMR 1995
16

Chromosomes. CENP-C reshapes and stabilizes CENP-A nucleosomes at the centromere.
Samantha J Falk, Lucie Y Guo, Nikolina Sekulic, Evan M Smoak, Tomoyasu Mani, Glennis A Logsdon, Kushol Gupta, Lars E T Jansen, Gregory D Van Duyne, Sergei A Vinogradov,[...]. Science 2015
121
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.