A citation-based method for searching scientific literature

Nicola Micali, Suel-Kee Kim, Marcelo Diaz-Bustamante, Genevieve Stein-O'Brien, Seungmae Seo, Joo-Heon Shin, Brian G Rash, Shaojie Ma, Yanhong Wang, Nicolas A Olivares, Jon I Arellano, Kristen R Maynard, Elana J Fertig, Alan J Cross, Roland W Bürli, Nicholas J Brandon, Daniel R Weinberger, Joshua G Chenoweth, Daniel J Hoeppner, Nenad Sestan, Pasko Rakic, Carlo Colantuoni, Ronald D McKay. Cell Rep 2020
Times Cited: 5







List of co-cited articles
9 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Organoid single-cell genomic atlas uncovers human-specific features of brain development.
Sabina Kanton, Michael James Boyle, Zhisong He, Malgorzata Santel, Anne Weigert, Fátima Sanchís-Calleja, Patricia Guijarro, Leila Sidow, Jonas Simon Fleck, Dingding Han,[...]. Nature 2019
177
60

Establishing Cerebral Organoids as Models of Human-Specific Brain Evolution.
Alex A Pollen, Aparna Bhaduri, Madeline G Andrews, Tomasz J Nowakowski, Olivia S Meyerson, Mohammed A Mostajo-Radji, Elizabeth Di Lullo, Beatriz Alvarado, Melanie Bedolli, Max L Dougherty,[...]. Cell 2019
171
60

Human Astrocyte Maturation Captured in 3D Cerebral Cortical Spheroids Derived from Pluripotent Stem Cells.
Steven A Sloan, Spyros Darmanis, Nina Huber, Themasap A Khan, Fikri Birey, Christine Caneda, Richard Reimer, Stephen R Quake, Ben A Barres, Sergiu P Paşca. Neuron 2017
222
40

Generation and assembly of human brain region-specific three-dimensional cultures.
Steven A Sloan, Jimena Andersen, Anca M Pașca, Fikri Birey, Sergiu P Pașca. Nat Protoc 2018
94
40

Fusion of Regionally Specified hPSC-Derived Organoids Models Human Brain Development and Interneuron Migration.
Yangfei Xiang, Yoshiaki Tanaka, Benjamin Patterson, Young-Jin Kang, Gubbi Govindaiah, Naomi Roselaar, Bilal Cakir, Kun-Yong Kim, Adam P Lombroso, Sung-Min Hwang,[...]. Cell Stem Cell 2017
249
40


Assembly of functionally integrated human forebrain spheroids.
Fikri Birey, Jimena Andersen, Christopher D Makinson, Saiful Islam, Wu Wei, Nina Huber, H Christina Fan, Kimberly R Cordes Metzler, Georgia Panagiotakos, Nicholas Thom,[...]. Nature 2017
460
40

Reliability of human cortical organoid generation.
Se-Jin Yoon, Lubayna S Elahi, Anca M Pașca, Rebecca M Marton, Aaron Gordon, Omer Revah, Yuki Miura, Elisabeth M Walczak, Gwendolyn M Holdgate, H Christina Fan,[...]. Nat Methods 2019
145
40

hESC-Derived Thalamic Organoids Form Reciprocal Projections When Fused with Cortical Organoids.
Yangfei Xiang, Yoshiaki Tanaka, Bilal Cakir, Benjamin Patterson, Kun-Yong Kim, Pingnan Sun, Young-Jin Kang, Mei Zhong, Xinran Liu, Prabir Patra,[...]. Cell Stem Cell 2019
121
40


Functional Studies of Missense TREM2 Mutations in Human Stem Cell-Derived Microglia.
Philip W Brownjohn, James Smith, Ravi Solanki, Ebba Lohmann, Henry Houlden, John Hardy, Sabine Dietmann, Frederick J Livesey. Stem Cell Reports 2018
56
20

A case of mistaken identity.
Ruth E Hanna, John G Doench. Nat Biotechnol 2018
10
20

Simultaneous epitope and transcriptome measurement in single cells.
Marlon Stoeckius, Christoph Hafemeister, William Stephenson, Brian Houck-Loomis, Pratip K Chattopadhyay, Harold Swerdlow, Rahul Satija, Peter Smibert. Nat Methods 2017
739
20


Neural Subtype Specification from Human Pluripotent Stem Cells.
Yunlong Tao, Su-Chun Zhang. Cell Stem Cell 2016
123
20

Toward an elucidation of the molecular genetics of inherited retinal degenerations.
G Jane Farrar, Matthew Carrigan, Adrian Dockery, Sophia Millington-Ward, Arpad Palfi, Naomi Chadderton, Marian Humphries, Anna Sophia Kiang, Paul F Kenna, Pete Humphries. Hum Mol Genet 2017
39
20

Human iPSC-Derived Cerebral Organoids Model Cellular Features of Lissencephaly and Reveal Prolonged Mitosis of Outer Radial Glia.
Marina Bershteyn, Tomasz J Nowakowski, Alex A Pollen, Elizabeth Di Lullo, Aishwarya Nene, Anthony Wynshaw-Boris, Arnold R Kriegstein. Cell Stem Cell 2017
250
20

Biology and therapy of inherited retinal degenerative disease: insights from mouse models.
Shobi Veleri, Csilla H Lazar, Bo Chang, Paul A Sieving, Eyal Banin, Anand Swaroop. Dis Model Mech 2015
133
20


Single-cell epigenomics: Recording the past and predicting the future.
Gavin Kelsey, Oliver Stegle, Wolf Reik. Science 2017
175
20

Genome-Scale CRISPR Screens Identify Human Pluripotency-Specific Genes.
Robert J Ihry, Max R Salick, Daniel J Ho, Marie Sondey, Sravya Kommineni, Steven Paula, Joe Raymond, Beata Henry, Elizabeth Frias, Qiong Wang,[...]. Cell Rep 2019
27
20

Systematic Comparison of Retinal Organoid Differentiation from Human Pluripotent Stem Cells Reveals Stage Specific, Cell Line, and Methodological Differences.
Carla B Mellough, Joseph Collin, Rachel Queen, Gerrit Hilgen, Birthe Dorgau, Darin Zerti, Majed Felemban, Kathryn White, Evelyne Sernagor, Majlinda Lako. Stem Cells Transl Med 2019
40
20

Microglia innately develop within cerebral organoids.
Paul R Ormel, Renata Vieira de Sá, Emma J van Bodegraven, Henk Karst, Oliver Harschnitz, Marjolein A M Sneeboer, Lill Eva Johansen, Roland E van Dijk, Nicky Scheefhals, Amber Berdenis van Berlekom,[...]. Nat Commun 2018
190
20

Disrupted alternative splicing for genes implicated in splicing and ciliogenesis causes PRPF31 retinitis pigmentosa.
Adriana Buskin, Lili Zhu, Valeria Chichagova, Basudha Basu, Sina Mozaffari-Jovin, David Dolan, Alastair Droop, Joseph Collin, Revital Bronstein, Sudeep Mehrotra,[...]. Nat Commun 2018
72
20

Cerebral cortex expansion and folding: what have we learned?
Virginia Fernández, Cristina Llinares-Benadero, Víctor Borrell. EMBO J 2016
131
20


Self-organizing optic-cup morphogenesis in three-dimensional culture.
Mototsugu Eiraku, Nozomu Takata, Hiroki Ishibashi, Masako Kawada, Eriko Sakakura, Satoru Okuda, Kiyotoshi Sekiguchi, Taiji Adachi, Yoshiki Sasai. Nature 2011
20

Spatial transcriptomics: paving the way for tissue-level systems biology.
Andreas E Moor, Shalev Itzkovitz. Curr Opin Biotechnol 2017
59
20


Using induced pluripotent stem cells to understand retinal ciliopathy disease mechanisms and develop therapies.
David A Parfitt, Amelia Lane, Conor Ramsden, Katarina Jovanovic, Peter J Coffey, Alison J Hardcastle, Michael E Cheetham. Biochem Soc Trans 2016
14
20

CRISPR Interference-Based Platform for Multimodal Genetic Screens in Human iPSC-Derived Neurons.
Ruilin Tian, Mariam A Gachechiladze, Connor H Ludwig, Matthew T Laurie, Jason Y Hong, Diane Nathaniel, Anika V Prabhu, Michael S Fernandopulle, Rajan Patel, Mehrnoosh Abshari,[...]. Neuron 2019
90
20

Combinatorial single-cell CRISPR screens by direct guide RNA capture and targeted sequencing.
Joseph M Replogle, Thomas M Norman, Albert Xu, Jeffrey A Hussmann, Jin Chen, J Zachery Cogan, Elliott J Meer, Jessica M Terry, Daniel P Riordan, Niranjan Srinivas,[...]. Nat Biotechnol 2020
48
20

Gelsolin dysfunction causes photoreceptor loss in induced pluripotent cell and animal retinitis pigmentosa models.
Roly Megaw, Hashem Abu-Arafeh, Melissa Jungnickel, Carla Mellough, Christine Gurniak, Walter Witke, Wei Zhang, Hemant Khanna, Pleasantine Mill, Baljean Dhillon,[...]. Nat Commun 2017
31
20

Self-organization of axial polarity, inside-out layer pattern, and species-specific progenitor dynamics in human ES cell-derived neocortex.
Taisuke Kadoshima, Hideya Sakaguchi, Tokushige Nakano, Mika Soen, Satoshi Ando, Mototsugu Eiraku, Yoshiki Sasai. Proc Natl Acad Sci U S A 2013
435
20

Human Cerebrospinal Fluid Promotes Neuronal Circuit Maturation of Human Induced Pluripotent Stem Cell-Derived 3D Neural Aggregates.
Julia Izsak, Henrik Seth, Stephan Theiss, Eric Hanse, Sebastian Illes. Stem Cell Reports 2020
4
25

Induction of pluripotent stem cells from adult human fibroblasts by defined factors.
Kazutoshi Takahashi, Koji Tanabe, Mari Ohnuki, Megumi Narita, Tomoko Ichisaka, Kiichiro Tomoda, Shinya Yamanaka. Cell 2007
20

Mapping human cell phenotypes to genotypes with single-cell genomics.
J Gray Camp, Randall Platt, Barbara Treutlein. Science 2019
32
20

FOXG1-Dependent Dysregulation of GABA/Glutamate Neuron Differentiation in Autism Spectrum Disorders.
Jessica Mariani, Gianfilippo Coppola, Ping Zhang, Alexej Abyzov, Lauren Provini, Livia Tomasini, Mariangela Amenduni, Anna Szekely, Dean Palejev, Michael Wilson,[...]. Cell 2015
538
20

Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells.
Eleni P Mimitou, Anthony Cheng, Antonino Montalbano, Stephanie Hao, Marlon Stoeckius, Mateusz Legut, Timothy Roush, Alberto Herrera, Efthymia Papalexi, Zhengqing Ouyang,[...]. Nat Methods 2019
117
20

Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq.
Diego Adhemar Jaitin, Assaf Weiner, Ido Yofe, David Lara-Astiaso, Hadas Keren-Shaul, Eyal David, Tomer Meir Salame, Amos Tanay, Alexander van Oudenaarden, Ido Amit. Cell 2016
303
20

Modeling Retinitis Pigmentosa: Retinal Organoids Generated From the iPSCs of a Patient With the USH2A Mutation Show Early Developmental Abnormalities.
Yonglong Guo, Peiyuan Wang, Jacey Hongjie Ma, Zekai Cui, Quan Yu, Shiwei Liu, Yunxia Xue, Deliang Zhu, Jixing Cao, Zhijie Li,[...]. Front Cell Neurosci 2019
23
20

Single-Cell Transcriptomic Comparison of Human Fetal Retina, hPSC-Derived Retinal Organoids, and Long-Term Retinal Cultures.
Akshayalakshmi Sridhar, Akina Hoshino, Connor R Finkbeiner, Alex Chitsazan, Li Dai, Alexandra K Haugan, Kayla M Eschenbacher, Dana L Jackson, Cole Trapnell, Olivia Bermingham-McDonogh,[...]. Cell Rep 2020
53
20

Generation of complex human organoid models including vascular networks by incorporation of mesodermal progenitor cells.
Philipp Wörsdörfer, Nahide Dalda, Anna Kern, Sarah Krüger, Nicole Wagner, Chee Keong Kwok, Erik Henke, Süleyman Ergün. Sci Rep 2019
58
20

Brains, genes, and primates.
Juan Carlos Izpisua Belmonte, Edward M Callaway, Sarah J Caddick, Patricia Churchland, Guoping Feng, Gregg E Homanics, Kuo-Fen Lee, David A Leopold, Cory T Miller, Jude F Mitchell,[...]. Neuron 2015
150
20

Design and analysis of CRISPR-Cas experiments.
Ruth E Hanna, John G Doench. Nat Biotechnol 2020
39
20

A pooled single-cell genetic screen identifies regulatory checkpoints in the continuum of the epithelial-to-mesenchymal transition.
José L McFaline-Figueroa, Andrew J Hill, Xiaojie Qiu, Dana Jackson, Jay Shendure, Cole Trapnell. Nat Genet 2019
47
20

Cerebral organoids model human brain development and microcephaly.
Madeline A Lancaster, Magdalena Renner, Carol-Anne Martin, Daniel Wenzel, Louise S Bicknell, Matthew E Hurles, Tessa Homfray, Josef M Penninger, Andrew P Jackson, Juergen A Knoblich. Nature 2013
20


Human cerebral organoids recapitulate gene expression programs of fetal neocortex development.
J Gray Camp, Farhath Badsha, Marta Florio, Sabina Kanton, Tobias Gerber, Michaela Wilsch-Bräuninger, Eric Lewitus, Alex Sykes, Wulf Hevers, Madeline Lancaster,[...]. Proc Natl Acad Sci U S A 2015
453
20

Embryonic stem cell lines from human blastocysts: somatic differentiation in vitro.
B E Reubinoff, M F Pera, C Y Fong, A Trounson, A Bongso. Nat Biotechnol 2000
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.