A citation-based method for searching scientific literature

Katarina Jurikova, Martin Gajarsky, Mona Hajikazemi, Jozef Nosek, Katarina Prochazkova, Katrin Paeschke, Lukas Trantirek, Lubomir Tomaska. J Biol Chem 2020
Times Cited: 6







List of co-cited articles
69 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication.
Agnel Sfeir, Settapong T Kosiyatrakul, Dirk Hockemeyer, Sheila L MacRae, Jan Karlseder, Carl L Schildkraut, Titia de Lange. Cell 2009
627
66

Stability of telomeric G-quadruplexes.
Phong Lan Thao Tran, Jean-Louis Mergny, Patrizia Alberti. Nucleic Acids Res 2011
95
66

Role of folding kinetics of secondary structures in telomeric G-overhangs in the regulation of telomere maintenance in Saccharomyces cerevisiae.
Katarina Jurikova, Martin Gajarsky, Mona Hajikazemi, Jozef Nosek, Katarina Prochazkova, Katrin Paeschke, Lukas Trantirek, Lubomir Tomaska. J Biol Chem 2020
5
80

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
50

Saccharomyces Rrm3p, a 5' to 3' DNA helicase that promotes replication fork progression through telomeric and subtelomeric DNA.
Andreas S Ivessa, Jin-Qiu Zhou, Vince P Schulz, Ellen K Monson, Virginia A Zakian. Genes Dev 2002
212
50

Telomere-bound TRF1 and TRF2 stall the replication fork at telomeric repeats.
Rieko Ohki, Fuyuki Ishikawa. Nucleic Acids Res 2004
79
50

Rudimentary G-quadruplex-based telomere capping in Saccharomyces cerevisiae.
Jasmine S Smith, Qijun Chen, Liliya A Yatsunyk, John M Nicoludis, Mark S Garcia, Ramon Kranaster, Shankar Balasubramanian, David Monchaud, Marie-Paule Teulade-Fichou, Lara Abramowitz,[...]. Nat Struct Mol Biol 2011
74
50

Anatomy and dynamics of DNA replication fork movement in yeast telomeric regions.
Svetlana Makovets, Ira Herskowitz, Elizabeth H Blackburn. Mol Cell Biol 2004
108
50

Telomeric G-quadruplexes are a substrate and site of localization for human telomerase.
Aaron L Moye, Karina C Porter, Scott B Cohen, Tram Phan, Katherine G Zyner, Natsuki Sasaki, George O Lovrecz, Jennifer L Beck, Tracy M Bryan. Nat Commun 2015
115
50

RTEL1 dismantles T loops and counteracts telomeric G4-DNA to maintain telomere integrity.
Jean-Baptiste Vannier, Visnja Pavicic-Kaltenbrunner, Mark I R Petalcorin, Hao Ding, Simon J Boulton. Cell 2012
288
50

Defective telomere lagging strand synthesis in cells lacking WRN helicase activity.
Laure Crabbe, Ramiro E Verdun, Candy I Haggblom, Jan Karlseder. Science 2004
437
50

The parallel G-quadruplex structure of vertebrate telomeric repeat sequences is not the preferred folding topology under physiological conditions.
Robert Hänsel, Frank Löhr, Silvie Foldynová-Trantírková, Ernst Bamberg, Lukás Trantírek, Volker Dötsch. Nucleic Acids Res 2011
110
33

DNA damage and genome instability by G-quadruplex ligands are mediated by R loops in human cancer cells.
Alessio De Magis, Stefano G Manzo, Marco Russo, Jessica Marinello, Rita Morigi, Olivier Sordet, Giovanni Capranico. Proc Natl Acad Sci U S A 2019
61
33

G-quadruplex Stabilization Fuels the ALT Pathway in ALT-positive Osteosarcoma Cells.
Roberta Amato, Martina Valenzuela, Francesco Berardinelli, Erica Salvati, Carmen Maresca, Stefano Leone, Antonio Antoccia, Antonella Sgura. Genes (Basel) 2020
9
33

Human telomeres replicate using chromosome-specific, rather than universal, replication programs.
William C Drosopoulos, Settapong T Kosiyatrakul, Zi Yan, Simone G Calderano, Carl L Schildkraut. J Cell Biol 2012
44
33

Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends.
Claus M Azzalin, Patrick Reichenbach, Lela Khoriauli, Elena Giulotto, Joachim Lingner. Science 2007
799
33

G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
296
33

Extension of G-quadruplex DNA by ciliate telomerase.
Liana Oganesian, Ian K Moon, Tracy M Bryan, Michael B Jarstfer. EMBO J 2006
91
33

Structure of a Stable G-Hairpin.
Martin Gajarský, Martina Lenarčič Živković, Petr Stadlbauer, Bruno Pagano, Radovan Fiala, Jussara Amato, L'ubomír Tomáška, Jiří Šponer, Janez Plavec, Lukáš Trantírek. J Am Chem Soc 2017
22
33


Targeting BRCA1 and BRCA2 Deficiencies with G-Quadruplex-Interacting Compounds.
Jutta Zimmer, Eliana M C Tacconi, Cecilia Folio, Sophie Badie, Manuela Porru, Kerstin Klare, Manuela Tumiati, Enni Markkanen, Swagata Halder, Anderson Ryan,[...]. Mol Cell 2016
98
33


In vitro generated antibodies specific for telomeric guanine-quadruplex DNA react with Stylonychia lemnae macronuclei.
C Schaffitzel, I Berger, J Postberg, J Hanes, H J Lipps, A Plückthun. Proc Natl Acad Sci U S A 2001
442
33


Unique C. elegans telomeric overhang structures reveal the evolutionarily conserved properties of telomeric DNA.
Petra Školáková, Silvie Foldynová-Trantírková, Klára Bednářová, Radovan Fiala, Michaela Vorlíčková, Lukáš Trantírek. Nucleic Acids Res 2015
12
33

Telomere end-binding proteins control the formation of G-quadruplex DNA structures in vivo.
Katrin Paeschke, Tomas Simonsson, Jan Postberg, Daniela Rhodes, Hans Joachim Lipps. Nat Struct Mol Biol 2005
397
33

Telomere elongation in immortal human cells without detectable telomerase activity.
T M Bryan, A Englezou, J Gupta, S Bacchetti, R R Reddel. EMBO J 1995
977
33

Telomerase promotes formation of a telomere protective complex in cancer cells.
Omesha N Perera, Alexander P Sobinoff, Erdahl T Teber, Ashley Harman, Michelle F Maritz, Sile F Yang, Hilda A Pickett, Anthony J Cesare, Jonathan W Arthur, Karen L MacKenzie,[...]. Sci Adv 2019
12
33

Genetic interactions of G-quadruplexes in humans.
Katherine G Zyner, Darcie S Mulhearn, Santosh Adhikari, Sergio Martínez Cuesta, Marco Di Antonio, Nicolas Erard, Gregory J Hannon, David Tannahill, Shankar Balasubramanian. Elife 2019
28
33



RTEL1 suppresses G-quadruplex-associated R-loops at difficult-to-replicate loci in the human genome.
Wei Wu, Rahul Bhowmick, Ivan Vogel, Özgün Özer, Fiorella Ghisays, Roshan S Thakur, Esther Sanchez de Leon, Philipp H Richter, Liqun Ren, John H Petrini,[...]. Nat Struct Mol Biol 2020
16
33


Quantitative telomeric overhang determination using a double-strand specific nuclease.
Yong Zhao, Hirotoshi Hoshiyama, Jerry W Shay, Woodring E Wright. Nucleic Acids Res 2008
73
33

Mammalian telomeres end in a large duplex loop.
J D Griffith, L Comeau, S Rosenfield, R M Stansel, A Bianchi, H Moss, T de Lange. Cell 1999
33

Super-resolution fluorescence imaging of telomeres reveals TRF2-dependent T-loop formation.
Ylli Doksani, John Y Wu, Titia de Lange, Xiaowei Zhuang. Cell 2013
255
33


Hydration is a major determinant of the G-quadruplex stability and conformation of the human telomere 3' sequence of d(AG3(TTAG3)3).
M Clarke Miller, Robert Buscaglia, Jonathan B Chaires, Andrew N Lane, John O Trent. J Am Chem Soc 2010
149
33

Conformation Selective Antibody Enables Genome Profiling and Leads to Discovery of Parallel G-Quadruplex in Human Telomeres.
Hui-Yun Liu, Qi Zhao, Tian-Peng Zhang, Yue Wu, Yun-Xia Xiong, Shi-Ke Wang, Yuan-Long Ge, Jin-Hui He, Peng Lv, Tian-Miao Ou,[...]. Cell Chem Biol 2016
36
33

BLM helicase facilitates telomere replication during leading strand synthesis of telomeres.
William C Drosopoulos, Settapong T Kosiyatrakul, Carl L Schildkraut. J Cell Biol 2015
62
33


A novel small molecule that alters shelterin integrity and triggers a DNA-damage response at telomeres.
Raphaël Rodriguez, Sebastian Müller, Justin A Yeoman, Chantal Trentesaux, Jean-François Riou, Shankar Balasubramanian. J Am Chem Soc 2008
225
33

G-rich telomeric and ribosomal DNA sequences from the fission yeast genome form stable G-quadruplex DNA structures in vitro and are unwound by the Pfh1 DNA helicase.
Marcus Wallgren, Jani B Mohammad, Kok-Phen Yan, Parham Pourbozorgi-Langroudi, Mahsa Ebrahimi, Nasim Sabouri. Nucleic Acids Res 2016
39
33

Rad51 and DNA-PKcs are involved in the generation of specific telomere aberrations induced by the quadruplex ligand 360A that impair mitotic cell progression and lead to cell death.
Laurent R Gauthier, Christine Granotier, Françoise Hoffschir, Olivier Etienne, Ali Ayouaz, Chantal Desmaze, Patrick Mailliet, Denis S Biard, François D Boussin. Cell Mol Life Sci 2012
26
33

Human POT1 disrupts telomeric G-quadruplexes allowing telomerase extension in vitro.
Arthur J Zaug, Elaine R Podell, Thomas R Cech. Proc Natl Acad Sci U S A 2005
265
33


Mammalian CST averts replication failure by preventing G-quadruplex accumulation.
Miaomiao Zhang, Bing Wang, Tingfang Li, Rui Liu, Yingnan Xiao, Xin Geng, Guang Li, Qiang Liu, Carolyn M Price, Yang Liu,[...]. Nucleic Acids Res 2019
20
33

Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA.
Michelle L Duquette, Priya Handa, Jack A Vincent, Andrew F Taylor, Nancy Maizels. Genes Dev 2004
353
33

Mammalian DNA2 helicase/nuclease cleaves G-quadruplex DNA and is required for telomere integrity.
Weiqiang Lin, Shilpa Sampathi, Huifang Dai, Changwei Liu, Mian Zhou, Jenny Hu, Qin Huang, Judith Campbell, Kazuo Shin-Ya, Li Zheng,[...]. EMBO J 2013
86
33

The terminal DNA structure of mammalian chromosomes.
R McElligott, R J Wellinger. EMBO J 1997
268
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.