A citation-based method for searching scientific literature

Natalia Voronina, John K L Wong, Daniel Hübschmann, Mario Hlevnjak, Sebastian Uhrig, Christoph E Heilig, Peter Horak, Simon Kreutzfeldt, Andreas Mock, Albrecht Stenzinger, Barbara Hutter, Martina Fröhlich, Benedikt Brors, Arne Jahn, Barbara Klink, Laura Gieldon, Lina Sieverling, Lars Feuerbach, Priya Chudasama, Katja Beck, Matthias Kroiss, Christoph Heining, Lino Möhrmann, Andrea Fischer, Evelin Schröck, Hanno Glimm, Marc Zapatka, Peter Lichter, Stefan Fröhling, Aurélie Ernst. Nat Commun 2020
Times Cited: 18







List of co-cited articles
122 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Massive genomic rearrangement acquired in a single catastrophic event during cancer development.
Philip J Stephens, Chris D Greenman, Beiyuan Fu, Fengtang Yang, Graham R Bignell, Laura J Mudie, Erin D Pleasance, King Wai Lau, David Beare, Lucy A Stebbings,[...]. Cell 2011
66

Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing.
Isidro Cortés-Ciriano, Jake June-Koo Lee, Ruibin Xi, Dhawal Jain, Youngsook L Jung, Lixing Yang, Dmitry Gordenin, Leszek J Klimczak, Cheng-Zhong Zhang, David S Pellman,[...]. Nat Genet 2020
103
61

Chromothripsis from DNA damage in micronuclei.
Cheng-Zhong Zhang, Alexander Spektor, Hauke Cornils, Joshua M Francis, Emily K Jackson, Shiwei Liu, Matthew Meyerson, David Pellman. Nature 2015
503
55

DNA breaks and chromosome pulverization from errors in mitosis.
Karen Crasta, Neil J Ganem, Regina Dagher, Alexandra B Lantermann, Elena V Ivanova, Yunfeng Pan, Luigi Nezi, Alexei Protopopov, Dipanjan Chowdhury, David Pellman. Nature 2012
693
55

Chromothripsis and Kataegis Induced by Telomere Crisis.
John Maciejowski, Yilong Li, Nazario Bosco, Peter J Campbell, Titia de Lange. Cell 2015
303
50

Mechanisms generating cancer genome complexity from a single cell division error.
Neil T Umbreit, Cheng-Zhong Zhang, Luke D Lynch, Logan J Blaine, Anna M Cheng, Richard Tourdot, Lili Sun, Hannah F Almubarak, Kim Judge, Thomas J Mitchell,[...]. Science 2020
78
44

Punctuated evolution of prostate cancer genomes.
Sylvan C Baca, Davide Prandi, Michael S Lawrence, Juan Miguel Mosquera, Alessandro Romanel, Yotam Drier, Kyung Park, Naoki Kitabayashi, Theresa Y MacDonald, Mahmoud Ghandi,[...]. Cell 2013
713
38

Micronuclei-based model system reveals functional consequences of chromothripsis in human cells.
Maja Kneissig, Kristina Keuper, Mirjam S de Pagter, Markus J van Roosmalen, Jana Martin, Hannah Otto, Verena Passerini, Aline Campos Sparr, Ivo Renkens, Fenna Kropveld,[...]. Elife 2019
20
38

Selective Y centromere inactivation triggers chromosome shattering in micronuclei and repair by non-homologous end joining.
Peter Ly, Levi S Teitz, Dong H Kim, Ofer Shoshani, Helen Skaletsky, Daniele Fachinetti, David C Page, Don W Cleveland. Nat Cell Biol 2017
115
38

Catastrophic nuclear envelope collapse in cancer cell micronuclei.
Emily M Hatch, Andrew H Fischer, Thomas J Deerinck, Martin W Hetzer. Cell 2013
313
38

Nuclear envelope assembly defects link mitotic errors to chromothripsis.
Shiwei Liu, Mijung Kwon, Mark Mannino, Nachen Yang, Fioranna Renda, Alexey Khodjakov, David Pellman. Nature 2018
105
38

Criteria for inference of chromothripsis in cancer genomes.
Jan O Korbel, Peter J Campbell. Cell 2013
286
38


A cell-based model system links chromothripsis with hyperploidy.
Balca R Mardin, Alexandros P Drainas, Sebastian M Waszak, Joachim Weischenfeldt, Mayumi Isokane, Adrian M Stütz, Benjamin Raeder, Theocharis Efthymiopoulos, Christopher Buccitelli, Maia Segura-Wang,[...]. Mol Syst Biol 2015
73
33

Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations.
Tobias Rausch, David T W Jones, Marc Zapatka, Adrian M Stütz, Thomas Zichner, Joachim Weischenfeldt, Natalie Jäger, Marc Remke, David Shih, Paul A Northcott,[...]. Cell 2012
516
33

Chromosome segregation errors generate a diverse spectrum of simple and complex genomic rearrangements.
Peter Ly, Simon F Brunner, Ofer Shoshani, Dong Hyun Kim, Weijie Lan, Tatyana Pyntikova, Adrienne M Flanagan, Sam Behjati, David C Page, Peter J Campbell,[...]. Nat Genet 2019
51
27

Mutational processes molding the genomes of 21 breast cancers.
Serena Nik-Zainal, Ludmil B Alexandrov, David C Wedge, Peter Van Loo, Christopher D Greenman, Keiran Raine, David Jones, Jonathan Hinton, John Marshall, Lucy A Stebbings,[...]. Cell 2012
27

Chromothripsis in acute myeloid leukemia: biological features and impact on survival.
Maria Chiara Fontana, Giovanni Marconi, Jelena D Milosevic Feenstra, Eugenio Fonzi, Cristina Papayannidis, Andrea Ghelli Luserna di Rorá, Antonella Padella, Vincenza Solli, Eugenia Franchini, Emanuela Ottaviani,[...]. Leukemia 2018
36
27

Patterns of somatic structural variation in human cancer genomes.
Yilong Li, Nicola D Roberts, Jeremiah A Wala, Ofer Shapira, Steven E Schumacher, Kiran Kumar, Ekta Khurana, Sebastian Waszak, Jan O Korbel, James E Haber,[...]. Nature 2020
114
27

Unrestrained ESCRT-III drives micronuclear catastrophe and chromosome fragmentation.
Marina Vietri, Sebastian W Schultz, Aurélie Bellanger, Carl M Jones, Louise I Petersen, Camilla Raiborg, Ellen Skarpen, Christeen Ramane J Pedurupillay, Ingrid Kjos, Eline Kip,[...]. Nat Cell Biol 2020
26
22

APOBEC3-dependent kataegis and TREX1-driven chromothripsis during telomere crisis.
John Maciejowski, Aikaterini Chatzipli, Alexandra Dananberg, Kevan Chu, Eleonore Toufektchan, Leszek J Klimczak, Dmitry A Gordenin, Peter J Campbell, Titia de Lange. Nat Genet 2020
30
22

Chromosome catastrophes involve replication mechanisms generating complex genomic rearrangements.
Pengfei Liu, Ayelet Erez, Sandesh C Sreenath Nagamani, Shweta U Dhar, Katarzyna E Kołodziejska, Avinash V Dharmadhikari, M Lance Cooper, Joanna Wiszniewska, Feng Zhang, Marjorie A Withers,[...]. Cell 2011
278
22

The molecular origins and pathophysiological consequences of micronuclei: New insights into an age-old problem.
Xihan Guo, Juan Ni, Ziqing Liang, Jinglun Xue, Michael F Fenech, Xu Wang. Mutat Res Rev Mutat Res 2019
36
22

The evolutionary history of 2,658 cancers.
Moritz Gerstung, Clemency Jolly, Ignaty Leshchiner, Stefan C Dentro, Santiago Gonzalez, Daniel Rosebrock, Thomas J Mitchell, Yulia Rubanova, Pavana Anur, Kaixian Yu,[...]. Nature 2020
181
22

Chromothripsis-like chromosomal rearrangements induced by ionizing radiation using proton microbeam irradiation system.
Maki Morishita, Tomoki Muramatsu, Yumiko Suto, Momoki Hirai, Teruaki Konishi, Shin Hayashi, Daichi Shigemizu, Tatsuhiko Tsunoda, Keiji Moriyama, Johji Inazawa. Oncotarget 2016
31
22

Constitutional and somatic rearrangement of chromosome 21 in acute lymphoblastic leukaemia.
Yilong Li, Claire Schwab, Sarra Ryan, Elli Papaemmanuil, Hazel M Robinson, Patricia Jacobs, Anthony V Moorman, Sara Dyer, Julian Borrow, Mike Griffiths,[...]. Nature 2014
156
22

Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes.
Jan J Molenaar, Jan Koster, Danny A Zwijnenburg, Peter van Sluis, Linda J Valentijn, Ida van der Ploeg, Mohamed Hamdi, Johan van Nes, Bart A Westerman, Jennemiek van Arkel,[...]. Nature 2012
554
22


Tracing Oncogene Rearrangements in the Mutational History of Lung Adenocarcinoma.
Jake June-Koo Lee, Seongyeol Park, Hansol Park, Sehui Kim, Jongkeun Lee, Junehawk Lee, Jeonghwan Youk, Kijong Yi, Yohan An, In Kyu Park,[...]. Cell 2019
59
22

Chromothripsis-like patterns are recurring but heterogeneously distributed features in a survey of 22,347 cancer genome screens.
Haoyang Cai, Nitin Kumar, Homayoun C Bagheri, Christian von Mering, Mark D Robinson, Michael Baudis. BMC Genomics 2014
70
22

Defective DNA damage repair leads to frequent catastrophic genomic events in murine and human tumors.
Manasi Ratnaparkhe, John K L Wong, Pei-Chi Wei, Mario Hlevnjak, Thorsten Kolb, Milena Simovic, Daniel Haag, Yashna Paul, Frauke Devens, Paul Northcott,[...]. Nat Commun 2018
29
22

The architecture and evolution of cancer neochromosomes.
Dale W Garsed, Owen J Marshall, Vincent D A Corbin, Arthur Hsu, Leon Di Stefano, Jan Schröder, Jason Li, Zhi-Ping Feng, Bo W Kim, Mark Kowarsky,[...]. Cancer Cell 2014
96
22

Chromosomal instability drives metastasis through a cytosolic DNA response.
Samuel F Bakhoum, Bryan Ngo, Ashley M Laughney, Julie-Ann Cavallo, Charles J Murphy, Peter Ly, Pragya Shah, Roshan K Sriram, Thomas B K Watkins, Neil K Taunk,[...]. Nature 2018
386
22

ESCRT III repairs nuclear envelope ruptures during cell migration to limit DNA damage and cell death.
M Raab, M Gentili, H de Belly, H R Thiam, P Vargas, A J Jimenez, F Lautenschlaeger, Raphaël Voituriez, A M Lennon-Duménil, N Manel,[...]. Science 2016
406
16

Nuclear envelope rupture and repair during cancer cell migration.
Celine M Denais, Rachel M Gilbert, Philipp Isermann, Alexandra L McGregor, Mariska te Lindert, Bettina Weigelin, Patricia M Davidson, Peter Friedl, Katarina Wolf, Jan Lammerding. Science 2016
522
16


Chromosome Mis-segregation Generates Cell-Cycle-Arrested Cells with Complex Karyotypes that Are Eliminated by the Immune System.
Stefano Santaguida, Amelia Richardson, Divya Ramalingam Iyer, Ons M'Saad, Lauren Zasadil, Kristin A Knouse, Yao Liang Wong, Nicholas Rhind, Arshad Desai, Angelika Amon. Dev Cell 2017
110
16

Rescue of DNA damage after constricted migration reveals a mechano-regulated threshold for cell cycle.
Yuntao Xia, Charlotte R Pfeifer, Kuangzheng Zhu, Jerome Irianto, Dazhen Liu, Kalia Pannell, Emily J Chen, Lawrence J Dooling, Michael P Tobin, Mai Wang,[...]. J Cell Biol 2019
28
16

Chromosome segregation errors as a cause of DNA damage and structural chromosome aberrations.
Aniek Janssen, Marja van der Burg, Karoly Szuhai, Geert J P L Kops, René H Medema. Science 2011
362
16

Chromosomes trapped in micronuclei are liable to segregation errors.
Mar Soto, Iraia García-Santisteban, Lenno Krenning, René H Medema, Jonne A Raaijmakers. J Cell Sci 2018
29
16

p53 Prohibits Propagation of Chromosome Segregation Errors that Produce Structural Aneuploidies.
Mar Soto, Jonne A Raaijmakers, Bjorn Bakker, Diana C J Spierings, Peter M Lansdorp, Floris Foijer, René H Medema. Cell Rep 2017
59
16

Chromothripsis and beyond: rapid genome evolution from complex chromosomal rearrangements.
Cheng-Zhong Zhang, Mitchell L Leibowitz, David Pellman. Genes Dev 2013
153
16


Timing the Landmark Events in the Evolution of Clear Cell Renal Cell Cancer: TRACERx Renal.
Thomas J Mitchell, Samra Turajlic, Andrew Rowan, David Nicol, James H R Farmery, Tim O'Brien, Inigo Martincorena, Patrick Tarpey, Nicos Angelopoulos, Lucy R Yates,[...]. Cell 2018
165
16

Genomic Hallmarks and Structural Variation in Metastatic Prostate Cancer.
David A Quigley, Ha X Dang, Shuang G Zhao, Paul Lloyd, Rahul Aggarwal, Joshi J Alumkal, Adam Foye, Vishal Kothari, Marc D Perry, Adina M Bailey,[...]. Cell 2018
182
16

Genomic profiling of Acute lymphoblastic leukemia in ataxia telangiectasia patients reveals tight link between ATM mutations and chromothripsis.
M Ratnaparkhe, M Hlevnjak, T Kolb, A Jauch, K K Maass, F Devens, A Rode, V Hovestadt, A Korshunov, A Pastorczak,[...]. Leukemia 2017
23
16

The DNA-damage response in human biology and disease.
Stephen P Jackson, Jiri Bartek. Nature 2009
16

Subgroup-specific structural variation across 1,000 medulloblastoma genomes.
Paul A Northcott, David J H Shih, John Peacock, Livia Garzia, A Sorana Morrissy, Thomas Zichner, Adrian M Stütz, Andrey Korshunov, Jüri Reimand, Steven E Schumacher,[...]. Nature 2012
527
16

Cancer genome landscapes.
Bert Vogelstein, Nickolas Papadopoulos, Victor E Velculescu, Shibin Zhou, Luis A Diaz, Kenneth W Kinzler. Science 2013
16

Chromothripsis in Human Breast Cancer.
Michiel Bolkestein, John K L Wong, Verena Thewes, Verena Körber, Mario Hlevnjak, Shaymaa Elgaafary, Markus Schulze, Felix K F Kommoss, Hans-Peter Sinn, Tobias Anzeneder,[...]. Cancer Res 2020
4
75


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.