A citation-based method for searching scientific literature

Soujanya Vinayagamurthy, Akansha Ganguly, Shantanu Chowdhury. J Biol Chem 2020
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Telomeres and telomerase: three decades of progress.
Jerry W Shay, Woodring E Wright. Nat Rev Genet 2019
171
100

G-quadruplex recognition by bis-indole carboxamides.
Jyotirmayee Dash, Pravin S Shirude, Shankar Balasubramanian. Chem Commun (Camb) 2008
56
100

Telomere repeat-binding factor 2 binds extensively to extra-telomeric G-quadruplexes and regulates the epigenetic status of several gene promoters.
Ananda Kishore Mukherjee, Shalu Sharma, Sulochana Bagri, Rintu Kutum, Pankaj Kumar, Asgar Hussain, Prateek Singh, Dhurjhoti Saha, Anirban Kar, Debasis Dash,[...]. J Biol Chem 2019
10
100

TERRA -a calling card for telomerase.
Elena Smekalova, Peter Baumann. Mol Cell 2013
10
100

Extratelomeric Binding of the Telomere Binding Protein TRF2 at the PCGF3 Promoter Is G-Quadruplex Motif-Dependent.
Gunjan Purohit, Ananda Kishor Mukherjee, Shalu Sharma, Shantanu Chowdhury. Biochemistry 2018
6
100

The telomere deprotection response is functionally distinct from the genomic DNA damage response.
Anthony J Cesare, Makoto T Hayashi, Laure Crabbe, Jan Karlseder. Mol Cell 2013
91
100


Transcription regulation of CDKN1A (p21/CIP1/WAF1) by TRF2 is epigenetically controlled through the REST repressor complex.
Tabish Hussain, Dhurjhoti Saha, Gunjan Purohit, Anirban Kar, Anand Kishore Mukherjee, Shalu Sharma, Suman Sengupta, Parashar Dhapola, Basudeb Maji, Sreekanth Vedagopuram,[...]. Sci Rep 2017
26
100

Telomerase maintains telomere structure in normal human cells.
Kenkichi Masutomi, Evan Y Yu, Shilagardy Khurts, Ittai Ben-Porath, Jennifer L Currier, Geoffrey B Metz, Mary W Brooks, Shuichi Kaneko, Seishi Murakami, James A DeCaprio,[...]. Cell 2003
574
100

Transcriptional outcome of telomere signalling.
Jing Ye, Valérie M Renault, Karine Jamet, Eric Gilson. Nat Rev Genet 2014
79
100

Two-step mechanism involving active-site conformational changes regulates human telomerase DNA binding.
Christopher G Tomlinson, Aaron L Moye, Jessica K Holien, Michael W Parker, Scott B Cohen, Tracy M Bryan. Biochem J 2015
12
100

Pot1 and telomere maintenance.
Peter Baumann, Carolyn Price. FEBS Lett 2010
41
100

Apollo-taking the lead in telomere protection.
Jay F Sarthy, Peter Baumann. Mol Cell 2010
8
100

A Pharmacological Chaperone Molecule Induces Cancer Cell Death by Restoring Tertiary DNA Structures in Mutant hTERT Promoters.
Hyun-Jin Kang, Yunxi Cui, Holly Yin, Amy Scheid, William P D Hendricks, Jessica Schmidt, Aleksandar Sekulic, Deming Kong, Jeffrey M Trent, Vijay Gokhale,[...]. J Am Chem Soc 2016
48
100

Non-duplex G-Quadruplex Structures Emerge as Mediators of Epigenetic Modifications.
Ananda Kishore Mukherjee, Shalu Sharma, Shantanu Chowdhury. Trends Genet 2019
35
100

Human RAP1 inhibits non-homologous end joining at telomeres.
Jay Sarthy, Nancy S Bae, Jonathan Scrafford, Peter Baumann. EMBO J 2009
86
100

TIN2 Functions with TPP1/POT1 To Stimulate Telomerase Processivity.
Alexandra M Pike, Margaret A Strong, John Paul T Ouyang, Carol W Greider. Mol Cell Biol 2019
18
100

TRF2 binds branched DNA to safeguard telomere integrity.
Isabelle Schmutz, Leonid Timashev, Wei Xie, Dinshaw J Patel, Titia de Lange. Nat Struct Mol Biol 2017
36
100

Complex interactions between the DNA-damage response and mammalian telomeres.
Nausica Arnoult, Jan Karlseder. Nat Struct Mol Biol 2015
103
100

Local enrichment of HP1alpha at telomeres alters their structure and regulation of telomere protection.
Tracy T Chow, Xiaoyu Shi, Jen-Hsuan Wei, Juan Guan, Guido Stadler, Bo Huang, Elizabeth H Blackburn. Nat Commun 2018
13
100

Telomere length-dependent transcription and epigenetic modifications in promoters remote from telomere ends.
Ananda Kishore Mukherjee, Shalu Sharma, Suman Sengupta, Dhurjhoti Saha, Pankaj Kumar, Tabish Hussain, Vivek Srivastava, Sumitabho Deb Roy, Jerry W Shay, Shantanu Chowdhury. PLoS Genet 2018
24
100

The effect of the TRF2 N-terminal and TRFH regions on telomeric G-quadruplex structures.
Ilene M Pedroso, William Hayward, Terace M Fletcher. Nucleic Acids Res 2009
36
100

Mutation of the TERT promoter, switch to active chromatin, and monoallelic TERT expression in multiple cancers.
Josh Lewis Stern, Dan Theodorescu, Bert Vogelstein, Nickolas Papadopoulos, Thomas R Cech. Genes Dev 2015
97
100

The Polycomb complex PRC2 and its mark in life.
Raphaël Margueron, Danny Reinberg. Nature 2011
100

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
661
100

Single-strand DNA-binding protein SSB1 facilitates TERT recruitment to telomeres and maintains telomere G-overhangs.
Raj K Pandita, Tracy T Chow, Durga Udayakumar, Amanda L Bain, Liza Cubeddu, Clayton R Hunt, Wei Shi, Nobuo Horikoshi, Yong Zhao, Woodring E Wright,[...]. Cancer Res 2015
14
100


Characterization of the DNA binding specificity of Shelterin complexes.
Kyung H Choi, Amy S Farrell, Amanda S Lakamp, Michel M Ouellette. Nucleic Acids Res 2011
23
100

Long-Range Chromatin Interactions Drive Mutant TERT Promoter Activation.
Semih Can Akıncılar, Ekta Khattar, Priscilla Li Shan Boon, Bilal Unal, Melissa Jane Fullwood, Vinay Tergaonkar. Cancer Discov 2016
82
100

G4IPDB: A database for G-quadruplex structure forming nucleic acid interacting proteins.
Subodh Kumar Mishra, Arpita Tawani, Amit Mishra, Amit Kumar. Sci Rep 2016
46
100

Tertiary DNA structure in the single-stranded hTERT promoter fragment unfolds and refolds by parallel pathways via cooperative or sequential events.
Zhongbo Yu, Vanessa Gaerig, Yunxi Cui, HyunJin Kang, Vijay Gokhale, Yuan Zhao, Laurence H Hurley, Hanbin Mao. J Am Chem Soc 2012
55
100

Tetrasubstituted naphthalene diimide ligands with selectivity for telomeric G-quadruplexes and cancer cells.
Sonja M Hampel, Assitan Sidibe, Mekala Gunaratnam, Jean-François Riou, Stephen Neidle. Bioorg Med Chem Lett 2010
64
100

TERT rearrangements are frequent in neuroblastoma and identify aggressive tumors.
Linda J Valentijn, Jan Koster, Danny A Zwijnenburg, Nancy E Hasselt, Peter van Sluis, Richard Volckmann, Max M van Noesel, Rani E George, Godelieve A M Tytgat, Jan J Molenaar,[...]. Nat Genet 2015
184
100

Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes.
Alexander W Bruce, Ian J Donaldson, Ian C Wood, Sally A Yerbury, Michael I Sadowski, Michael Chapman, Berthold Göttgens, Noel J Buckley. Proc Natl Acad Sci U S A 2004
354
100

TERT promoter mutations occur frequently in gliomas and a subset of tumors derived from cells with low rates of self-renewal.
Patrick J Killela, Zachary J Reitman, Yuchen Jiao, Chetan Bettegowda, Nishant Agrawal, Luis A Diaz, Allan H Friedman, Henry Friedman, Gary L Gallia, Beppino C Giovanella,[...]. Proc Natl Acad Sci U S A 2013
848
100

Natural and pharmacological regulation of telomerase.
Jean-Louis Mergny, Jean-François Riou, Patrick Mailliet, Marie-Paule Teulade-Fichou, Eric Gilson. Nucleic Acids Res 2002
297
100

Cancer. The transcription factor GABP selectively binds and activates the mutant TERT promoter in cancer.
Robert J A Bell, H Tomas Rube, Alex Kreig, Andrew Mancini, Shaun D Fouse, Raman P Nagarajan, Serah Choi, Chibo Hong, Daniel He, Melike Pekmezci,[...]. Science 2015
287
100


Telomerase activity in normal and malignant hematopoietic cells.
D Broccoli, J W Young, T de Lange. Proc Natl Acad Sci U S A 1995
666
100

The Myb/SANT domain of the telomere-binding protein TRF2 alters chromatin structure.
Asmaa M Baker, Qiang Fu, William Hayward, Stuart M Lindsay, Terace M Fletcher. Nucleic Acids Res 2009
18
100

The hTERT core promoter forms three parallel G-quadruplexes.
Robert C Monsen, Lynn DeLeeuw, William L Dean, Robert D Gray, T Michael Sabo, Srinivas Chakravarthy, Jonathan B Chaires, John O Trent. Nucleic Acids Res 2020
11
100

Nontelomeric splice variant of telomere repeat-binding factor 2 maintains neuronal traits by sequestering repressor element 1-silencing transcription factor.
Peisu Zhang, Rebecca Casaday-Potts, Patricia Precht, Haiyang Jiang, Yie Liu, Michael J Pazin, Mark P Mattson. Proc Natl Acad Sci U S A 2011
19
100

TRF2-Mediated Control of Telomere DNA Topology as a Mechanism for Chromosome-End Protection.
Delphine Benarroch-Popivker, Sabrina Pisano, Aaron Mendez-Bermudez, Liudmyla Lototska, Parminder Kaur, Serge Bauwens, Nadir Djerbi, Chrysa M Latrick, Vincent Fraisier, Bei Pei,[...]. Mol Cell 2016
79
100

A Common Cancer Risk-Associated Allele in the hTERT Locus Encodes a Dominant Negative Inhibitor of Telomerase.
Anagha Killedar, Michael D Stutz, Alexander P Sobinoff, Christopher G Tomlinson, Tracy M Bryan, Jonathan Beesley, Georgia Chenevix-Trench, Roger R Reddel, Hilda A Pickett. PLoS Genet 2015
27
100

Human Rap1 modulates TRF2 attraction to telomeric DNA.
Eliška Janoušková, Ivona Nečasová, Jana Pavloušková, Michal Zimmermann, Milan Hluchý, Victoria Marini, Monika Nováková, Ctirad Hofr. Nucleic Acids Res 2015
37
100

Specific association of human telomerase activity with immortal cells and cancer.
N W Kim, M A Piatyszek, K R Prowse, C B Harley, M D West, P L Ho, G M Coviello, W E Wright, S L Weinrich, J W Shay. Science 1994
100

TERT promoter mutations in familial and sporadic melanoma.
Susanne Horn, Adina Figl, P Sivaramakrishna Rachakonda, Christine Fischer, Antje Sucker, Andreas Gast, Stephanie Kadel, Iris Moll, Eduardo Nagore, Kari Hemminki,[...]. Science 2013
100

c-Myc quadruplex-forming sequence Pu-27 induces extensive damage in both telomeric and nontelomeric regions of DNA.
Md Ashraful Islam, Shelia D Thomas, Vundavalli V Murty, Kara J Sedoris, Donald M Miller. J Biol Chem 2014
14
100

Control of human telomere length by TRF1 and TRF2.
A Smogorzewska, B van Steensel, A Bianchi, S Oelmann, M R Schaefer, G Schnapp, T de Lange. Mol Cell Biol 2000
564
100

Polycomb- and REST-associated histone deacetylases are independent pathways toward a mature neuronal phenotype.
James C McGann, Jon A Oyer, Saurabh Garg, Huilan Yao, Jun Liu, Xin Feng, Lujian Liao, John R Yates, Gail Mandel. Elife 2014
26
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.