A citation-based method for searching scientific literature

Mireille Melko, Kinga Winczura, Jérôme Olivier Rouvière, Michaela Oborská-Oplová, Pia K Andersen, Torben Heick Jensen. Nucleic Acids Res 2020
Times Cited: 2







List of co-cited articles
2 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identification of a Nuclear Exosome Decay Pathway for Processed Transcripts.
Nicola Meola, Michal Domanski, Evdoxia Karadoulama, Yun Chen, Coline Gentil, Dennis Pultz, Kristoffer Vitting-Seerup, Søren Lykke-Andersen, Jens S Andersen, Albin Sandelin,[...]. Mol Cell 2016
116
100

Exosome cofactor hMTR4 competes with export adaptor ALYREF to ensure balanced nuclear RNA pools for degradation and export.
Jing Fan, Bin Kuai, Guifen Wu, Xudong Wu, Binkai Chi, Lantian Wang, Ke Wang, Zhubing Shi, Heng Zhang, She Chen,[...]. EMBO J 2017
49
100

circRNA biogenesis competes with pre-mRNA splicing.
Reut Ashwal-Fluss, Markus Meyer, Nagarjuna Reddy Pamudurti, Andranik Ivanov, Osnat Bartok, Mor Hanan, Naveh Evantal, Sebastian Memczak, Nikolaus Rajewsky, Sebastian Kadener. Mol Cell 2014
50

Dynamic transcriptomic m6A decoration: writers, erasers, readers and functions in RNA metabolism.
Ying Yang, Phillip J Hsu, Yu-Sheng Chen, Yun-Gui Yang. Cell Res 2018
349
50



An interaction between KSHV ORF57 and UIF provides mRNA-adaptor redundancy in herpesvirus intronless mRNA export.
Brian R Jackson, James R Boyne, Marko Noerenberg, Adam Taylor, Guillaume M Hautbergue, Matthew J Walsh, Rachel Wheat, David J Blackbourn, Stuart A Wilson, Adrian Whitehouse. PLoS Pathog 2011
40
50

Human METTL16 is a N6-methyladenosine (m6A) methyltransferase that targets pre-mRNAs and various non-coding RNAs.
Ahmed S Warda, Jens Kretschmer, Philipp Hackert, Christof Lenz, Henning Urlaub, Claudia Höbartner, Katherine E Sloan, Markus T Bohnsack. EMBO Rep 2017
220
50

Kaposi's Sarcoma-Associated Herpesvirus-Encoded circRNAs Are Expressed in Infected Tumor Tissues and Are Incorporated into Virions.
Bizunesh Abere, Jinghui Li, Hongzhao Zhou, Tuna Toptan, Patrick S Moore, Yuan Chang. mBio 2020
24
50


Tandem array-based expression screens identify host mRNA targets of virus-encoded microRNAs.
Joseph M Ziegelbauer, Christopher S Sullivan, Don Ganem. Nat Genet 2009
162
50

Reading, writing and erasing mRNA methylation.
Sara Zaccara, Ryan J Ries, Samie R Jaffrey. Nat Rev Mol Cell Biol 2019
340
50

Unambiguous identification of miRNA:target site interactions by different types of ligation reactions.
Stefanie Grosswendt, Andrei Filipchyk, Mark Manzano, Filippos Klironomos, Marcel Schilling, Margareta Herzog, Eva Gottwein, Nikolaus Rajewsky. Mol Cell 2014
182
50

Viral factors reveal a role for REF/Aly in nuclear RNA stability.
Sarah H Stubbs, Olga V Hunter, Ashley Hoover, Nicholas K Conrad. Mol Cell Biol 2012
33
50


miRNAs and their roles in KSHV pathogenesis.
Hosni A M Hussein, Mohammad A Alfhili, Pranaya Pakala, Sandra Simon, Jaffer Hussain, James A McCubrey, Shaw M Akula. Virus Res 2019
9
50

A viral genome landscape of RNA polyadenylation from KSHV latent to lytic infection.
Vladimir Majerciak, Ting Ni, Wenjing Yang, Bowen Meng, Jun Zhu, Zhi-Ming Zheng. PLoS Pathog 2013
35
50

NRDE2 negatively regulates exosome functions by inhibiting MTR4 recruitment and exosome interaction.
Jianshu Wang, Jiyun Chen, Guifen Wu, Hongling Zhang, Xian Du, Suli Chen, Li Zhang, Ke Wang, Jing Fan, Shuaixin Gao,[...]. Genes Dev 2019
16
50

ALYREF mainly binds to the 5' and the 3' regions of the mRNA in vivo.
Min Shi, Heng Zhang, Xudong Wu, Zhisong He, Lantian Wang, Shanye Yin, Bin Tian, Guohui Li, Hong Cheng. Nucleic Acids Res 2017
50
50

Messenger RNA turnover and its regulation in herpesviral infection.
Britt A Glaunsinger, Donald E Ganem. Adv Virus Res 2006
36
50



Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types.
Julia Salzman, Charles Gawad, Peter Lincoln Wang, Norman Lacayo, Patrick O Brown. PLoS One 2012
50

Site specific target binding controls RNA cleavage efficiency by the Kaposi's sarcoma-associated herpesvirus endonuclease SOX.
Aaron S Mendez, Carolin Vogt, Jens Bohne, Britt A Glaunsinger. Nucleic Acids Res 2018
9
50

miR-K12-7-5p encoded by Kaposi's sarcoma-associated herpesvirus stabilizes the latent state by targeting viral ORF50/RTA.
Xianzhi Lin, Deguang Liang, Zhiheng He, Qiang Deng, Erle S Robertson, Ke Lan. PLoS One 2011
92
50


A ribonucleoprotein complex protects the interleukin-6 mRNA from degradation by distinct herpesviral endonucleases.
Mandy Muller, Stephanie Hutin, Oliver Marigold, Kathy H Li, Al Burlingame, Britt A Glaunsinger. PLoS Pathog 2015
20
50


To localize or not to localize: mRNA fate is in 3'UTR ends.
Catia Andreassi, Antonella Riccio. Trends Cell Biol 2009
226
50

Natural RNA circles function as efficient microRNA sponges.
Thomas B Hansen, Trine I Jensen, Bettina H Clausen, Jesper B Bramsen, Bente Finsen, Christian K Damgaard, Jørgen Kjems. Nature 2013
50

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
707
50

Circular RNAs are a large class of animal RNAs with regulatory potency.
Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti, Francesca Torti, Janna Krueger, Agnieszka Rybak, Luisa Maier, Sebastian D Mackowiak, Lea H Gregersen, Mathias Munschauer,[...]. Nature 2013
50

Host shutoff is a conserved phenotype of gammaherpesvirus infection and is orchestrated exclusively from the cytoplasm.
Sergio Covarrubias, Justin M Richner, Karen Clyde, Yeon J Lee, Britt A Glaunsinger. J Virol 2009
64
50

Extensive translation of circular RNAs driven by N6-methyladenosine.
Yun Yang, Xiaojuan Fan, Miaowei Mao, Xiaowei Song, Ping Wu, Yang Zhang, Yongfeng Jin, Yi Yang, Ling-Ling Chen, Yang Wang,[...]. Cell Res 2017
750
50

Endoribonucleolytic Cleavage of m6A-Containing RNAs by RNase P/MRP Complex.
Ok Hyun Park, Hongseok Ha, Yujin Lee, Sung Ho Boo, Do Hoon Kwon, Hyun Kyu Song, Yoon Ki Kim. Mol Cell 2019
154
50

KSHV microRNAs: Tricks of the Devil.
Jie Qin, Wan Li, Shou-Jiang Gao, Chun Lu. Trends Microbiol 2017
39
50

YTH Domain: A Family of N6-methyladenosine (m6A) Readers.
Shanhui Liao, Hongbin Sun, Chao Xu. Genomics Proteomics Bioinformatics 2018
118
50


A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation.
Jianzhao Liu, Yanan Yue, Dali Han, Xiao Wang, Ye Fu, Liang Zhang, Guifang Jia, Miao Yu, Zhike Lu, Xin Deng,[...]. Nat Chem Biol 2014
50

G-quadruplex forming sequences in the genome of all known human viruses: A comprehensive guide.
Enrico Lavezzo, Michele Berselli, Ilaria Frasson, Rosalba Perrone, Giorgio Palù, Alessandra R Brazzale, Sara N Richter, Stefano Toppo. PLoS Comput Biol 2018
49
50


Circular RNAs: emerging cancer biomarkers and targets.
Yu Zhang, Wei Liang, Peng Zhang, Jingyan Chen, Hui Qian, Xu Zhang, Wenrong Xu. J Exp Clin Cancer Res 2017
121
50

Kaposi's sarcoma-associated herpesvirus-like DNA sequences in multicentric Castleman's disease.
J Soulier, L Grollet, E Oksenhendler, P Cacoub, D Cazals-Hatem, P Babinet, M F d'Agay, J P Clauvel, M Raphael, L Degos. Blood 1995
50

LANA and hnRNP A1 Regulate the Translation of LANA mRNA through G-Quadruplexes.
Prerna Dabral, Jay Babu, Andrew Zareie, Subhash C Verma. J Virol 2020
12
50



m(6)A RNA methylation promotes XIST-mediated transcriptional repression.
Deepak P Patil, Chun-Kan Chen, Brian F Pickering, Amy Chow, Constanza Jackson, Mitchell Guttman, Samie R Jaffrey. Nature 2016
616
50


The Oncogenic Kaposi's Sarcoma-Associated Herpesvirus Encodes a Mimic of the Tumor-Suppressive miR-15/16 miRNA Family.
Kylee Morrison, Mark Manzano, Kevin Chung, Matthew J Schipma, Elizabeth T Bartom, Eva Gottwein. Cell Rep 2019
6
50

KSHV: pathways to tumorigenesis and persistent infection.
Louise Giffin, Blossom Damania. Adv Virus Res 2014
78
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.