A citation-based method for searching scientific literature

Yangfei Xiang, Bilal Cakir, In-Hyun Park. Semin Cell Dev Biol 2021
Times Cited: 7







List of co-cited articles
69 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Cerebral organoids model human brain development and microcephaly.
Madeline A Lancaster, Magdalena Renner, Carol-Anne Martin, Daniel Wenzel, Louise S Bicknell, Matthew E Hurles, Tessa Homfray, Josef M Penninger, Andrew P Jackson, Juergen A Knoblich. Nature 2013
85

Fused cerebral organoids model interactions between brain regions.
Joshua A Bagley, Daniel Reumann, Shan Bian, Julie Lévi-Strauss, Juergen A Knoblich. Nat Methods 2017
259
85

Individual brain organoids reproducibly form cell diversity of the human cerebral cortex.
Silvia Velasco, Amanda J Kedaigle, Sean K Simmons, Allison Nash, Marina Rocha, Giorgia Quadrato, Bruna Paulsen, Lan Nguyen, Xian Adiconis, Aviv Regev,[...]. Nature 2019
268
85

Self-organization of axial polarity, inside-out layer pattern, and species-specific progenitor dynamics in human ES cell-derived neocortex.
Taisuke Kadoshima, Hideya Sakaguchi, Tokushige Nakano, Mika Soen, Satoshi Ando, Mototsugu Eiraku, Yoshiki Sasai. Proc Natl Acad Sci U S A 2013
435
71

Fusion of Regionally Specified hPSC-Derived Organoids Models Human Brain Development and Interneuron Migration.
Yangfei Xiang, Yoshiaki Tanaka, Benjamin Patterson, Young-Jin Kang, Gubbi Govindaiah, Naomi Roselaar, Bilal Cakir, Kun-Yong Kim, Adam P Lombroso, Sung-Min Hwang,[...]. Cell Stem Cell 2017
249
71

Assembly of functionally integrated human forebrain spheroids.
Fikri Birey, Jimena Andersen, Christopher D Makinson, Saiful Islam, Wu Wei, Nina Huber, H Christina Fan, Kimberly R Cordes Metzler, Georgia Panagiotakos, Nicholas Thom,[...]. Nature 2017
460
71

Midbrain-like Organoids from Human Pluripotent Stem Cells Contain Functional Dopaminergic and Neuromelanin-Producing Neurons.
Junghyun Jo, Yixin Xiao, Alfred Xuyang Sun, Engin Cukuroglu, Hoang-Dai Tran, Jonathan Göke, Zi Ying Tan, Tzuen Yih Saw, Cheng-Peow Tan, Hidayat Lokman,[...]. Cell Stem Cell 2016
330
71

Cell diversity and network dynamics in photosensitive human brain organoids.
Giorgia Quadrato, Tuan Nguyen, Evan Z Macosko, John L Sherwood, Sung Min Yang, Daniel R Berger, Natalie Maria, Jorg Scholvin, Melissa Goldman, Justin P Kinney,[...]. Nature 2017
479
71

Functional cortical neurons and astrocytes from human pluripotent stem cells in 3D culture.
Anca M Paşca, Steven A Sloan, Laura E Clarke, Yuan Tian, Christopher D Makinson, Nina Huber, Chul Hoon Kim, Jin-Young Park, Nancy A O'Rourke, Khoa D Nguyen,[...]. Nat Methods 2015
649
71

Brain-Region-Specific Organoids Using Mini-bioreactors for Modeling ZIKV Exposure.
Xuyu Qian, Ha Nam Nguyen, Mingxi M Song, Christopher Hadiono, Sarah C Ogden, Christy Hammack, Bing Yao, Gregory R Hamersky, Fadi Jacob, Chun Zhong,[...]. Cell 2016
952
71


FOXG1-Dependent Dysregulation of GABA/Glutamate Neuron Differentiation in Autism Spectrum Disorders.
Jessica Mariani, Gianfilippo Coppola, Ping Zhang, Alexej Abyzov, Lauren Provini, Livia Tomasini, Mariangela Amenduni, Anna Szekely, Dean Palejev, Michael Wilson,[...]. Cell 2015
538
57

Engineering of human brain organoids with a functional vascular-like system.
Bilal Cakir, Yangfei Xiang, Yoshiaki Tanaka, Mehmet H Kural, Maxime Parent, Young-Jin Kang, Kayley Chapeton, Benjamin Patterson, Yifan Yuan, Chang-Shun He,[...]. Nat Methods 2019
199
57

Guided self-organization and cortical plate formation in human brain organoids.
Madeline A Lancaster, Nina S Corsini, Simone Wolfinger, E Hilary Gustafson, Alex W Phillips, Thomas R Burkard, Tomoki Otani, Frederick J Livesey, Juergen A Knoblich. Nat Biotechnol 2017
289
57

Self-organized formation of polarized cortical tissues from ESCs and its active manipulation by extrinsic signals.
Mototsugu Eiraku, Kiichi Watanabe, Mami Matsuo-Takasaki, Masako Kawada, Shigenobu Yonemura, Michiru Matsumura, Takafumi Wataya, Ayaka Nishiyama, Keiko Muguruma, Yoshiki Sasai. Cell Stem Cell 2008
775
57

Synthetic Analyses of Single-Cell Transcriptomes from Multiple Brain Organoids and Fetal Brain.
Yoshiaki Tanaka, Bilal Cakir, Yangfei Xiang, Gareth J Sullivan, In-Hyun Park. Cell Rep 2020
46
57

hESC-Derived Thalamic Organoids Form Reciprocal Projections When Fused with Cortical Organoids.
Yangfei Xiang, Yoshiaki Tanaka, Bilal Cakir, Benjamin Patterson, Kun-Yong Kim, Pingnan Sun, Young-Jin Kang, Mei Zhong, Xinran Liu, Prabir Patra,[...]. Cell Stem Cell 2019
121
57

An in vivo model of functional and vascularized human brain organoids.
Abed AlFatah Mansour, J Tiago Gonçalves, Cooper W Bloyd, Hao Li, Sarah Fernandes, Daphne Quang, Stephen Johnston, Sarah L Parylak, Xin Jin, Fred H Gage. Nat Biotechnol 2018
371
42

MeCP2-regulated miRNAs control early human neurogenesis through differential effects on ERK and AKT signaling.
N Mellios, D A Feldman, S D Sheridan, J P K Ip, S Kwok, S K Amoah, B Rosen, B A Rodriguez, B Crawford, R Swaminathan,[...]. Mol Psychiatry 2018
108
42

Modeling G2019S-LRRK2 Sporadic Parkinson's Disease in 3D Midbrain Organoids.
Hongwon Kim, Hyeok Ju Park, Hwan Choi, Yujung Chang, Hanseul Park, Jaein Shin, Junyeop Kim, Christopher J Lengner, Yong Kyu Lee, Jongpil Kim. Stem Cell Reports 2019
98
42

Generation of human vascularized brain organoids.
Missy T Pham, Kari M Pollock, Melanie D Rose, Whitney A Cary, Heather R Stewart, Ping Zhou, Jan A Nolta, Ben Waldau. Neuroreport 2018
178
42

Self-organization of polarized cerebellar tissue in 3D culture of human pluripotent stem cells.
Keiko Muguruma, Ayaka Nishiyama, Hideshi Kawakami, Kouichi Hashimoto, Yoshiki Sasai. Cell Rep 2015
274
42

Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling.
Stuart M Chambers, Christopher A Fasano, Eirini P Papapetrou, Mark Tomishima, Michel Sadelain, Lorenz Studer. Nat Biotechnol 2009
42

Induction of pluripotent stem cells from adult human fibroblasts by defined factors.
Kazutoshi Takahashi, Koji Tanabe, Mari Ohnuki, Megumi Narita, Tomoko Ichisaka, Kiichiro Tomoda, Shinya Yamanaka. Cell 2007
42

The use of brain organoids to investigate neural development and disease.
Elizabeth Di Lullo, Arnold R Kriegstein. Nat Rev Neurosci 2017
255
42

A 3D human triculture system modeling neurodegeneration and neuroinflammation in Alzheimer's disease.
Joseph Park, Isaac Wetzel, Ian Marriott, Didier Dréau, Carla D'Avanzo, Doo Yeon Kim, Rudolph E Tanzi, Hansang Cho. Nat Neurosci 2018
224
42

Generation of Functional Human 3D Cortico-Motor Assembloids.
Jimena Andersen, Omer Revah, Yuki Miura, Nicholas Thom, Neal D Amin, Kevin W Kelley, Mandeep Singh, Xiaoyu Chen, Mayuri Vijay Thete, Elisabeth M Walczak,[...]. Cell 2020
55
42

A human tissue screen identifies a regulator of ER secretion as a brain-size determinant.
Christopher Esk, Dominik Lindenhofer, Simon Haendeler, Roelof A Wester, Florian Pflug, Benoit Schroeder, Joshua A Bagley, Ulrich Elling, Johannes Zuber, Arndt von Haeseler,[...]. Science 2020
26
42

Microglia innately develop within cerebral organoids.
Paul R Ormel, Renata Vieira de Sá, Emma J van Bodegraven, Henk Karst, Oliver Harschnitz, Marjolein A M Sneeboer, Lill Eva Johansen, Roland E van Dijk, Nicky Scheefhals, Amber Berdenis van Berlekom,[...]. Nat Commun 2018
190
28

Pathological priming causes developmental gene network heterochronicity in autistic subject-derived neurons.
Simon T Schafer, Apua C M Paquola, Shani Stern, David Gosselin, Manching Ku, Monique Pena, Thomas J M Kuret, Marvin Liyanage, Abed AlFatah Mansour, Baptiste N Jaeger,[...]. Nat Neurosci 2019
103
28

Self-organizing optic-cup morphogenesis in three-dimensional culture.
Mototsugu Eiraku, Nozomu Takata, Hiroki Ishibashi, Masako Kawada, Eriko Sakakura, Satoru Okuda, Kiyotoshi Sekiguchi, Taiji Adachi, Yoshiki Sasai. Nature 2011
28

Generation of thalamic neurons from mouse embryonic stem cells.
Atsushi Shiraishi, Keiko Muguruma, Yoshiki Sasai. Development 2017
22
28

Pluripotent Stem Cell-Derived Cerebral Organoids Reveal Human Oligodendrogenesis with Dorsal and Ventral Origins.
Hyosung Kim, Ranjie Xu, Ragunathan Padmashri, Anna Dunaevsky, Ying Liu, Cheryl F Dreyfus, Peng Jiang. Stem Cell Reports 2019
48
28

Generation of cerebral organoids from human pluripotent stem cells.
Madeline A Lancaster, Juergen A Knoblich. Nat Protoc 2014
556
28


Minimization of exogenous signals in ES cell culture induces rostral hypothalamic differentiation.
Takafumi Wataya, Satoshi Ando, Keiko Muguruma, Hanako Ikeda, Kiichi Watanabe, Mototsugu Eiraku, Masako Kawada, Jun Takahashi, Nobuo Hashimoto, Yoshiki Sasai. Proc Natl Acad Sci U S A 2008
162
28

In situ generation of human brain organoids on a micropillar array.
Yujuan Zhu, Li Wang, Hao Yu, Fangchao Yin, Yaqing Wang, Haitao Liu, Lei Jiang, Jianhua Qin. Lab Chip 2017
49
28

Self-organized developmental patterning and differentiation in cerebral organoids.
Magdalena Renner, Madeline A Lancaster, Shan Bian, Heejin Choi, Taeyun Ku, Angela Peer, Kwanghun Chung, Juergen A Knoblich. EMBO J 2017
160
28

Generation of functional hippocampal neurons from self-organizing human embryonic stem cell-derived dorsomedial telencephalic tissue.
Hideya Sakaguchi, Taisuke Kadoshima, Mika Soen, Nobuhiro Narii, Yoshihito Ishida, Masatoshi Ohgushi, Jun Takahashi, Mototsugu Eiraku, Yoshiki Sasai. Nat Commun 2015
203
28

Reliability of human cortical organoid generation.
Se-Jin Yoon, Lubayna S Elahi, Anca M Pașca, Rebecca M Marton, Aaron Gordon, Omer Revah, Yuki Miura, Elisabeth M Walczak, Gwendolyn M Holdgate, H Christina Fan,[...]. Nat Methods 2019
145
28

Human Brain Organoids on a Chip Reveal the Physics of Folding.
Eyal Karzbrun, Aditya Kshirsagar, Sidney R Cohen, Jacob H Hanna, Orly Reiner. Nat Phys 2018
143
28

Self-formation of optic cups and storable stratified neural retina from human ESCs.
Tokushige Nakano, Satoshi Ando, Nozomu Takata, Masako Kawada, Keiko Muguruma, Kiyotoshi Sekiguchi, Koichi Saito, Shigenobu Yonemura, Mototsugu Eiraku, Yoshiki Sasai. Cell Stem Cell 2012
756
28

Dysregulation of BRD4 Function Underlies the Functional Abnormalities of MeCP2 Mutant Neurons.
Yangfei Xiang, Yoshiaki Tanaka, Benjamin Patterson, Sung-Min Hwang, Eriona Hysolli, Bilal Cakir, Kun-Yong Kim, Wanshan Wang, Young-Jin Kang, Ethan M Clement,[...]. Mol Cell 2020
16
28

Functionalization of Brain Region-specific Spheroids with Isogenic Microglia-like Cells.
Liqing Song, Xuegang Yuan, Zachary Jones, Cynthia Vied, Yu Miao, Mark Marzano, Thien Hua, Qing-Xiang Amy Sang, Jingjiao Guan, Teng Ma,[...]. Sci Rep 2019
49
28

Human CNS barrier-forming organoids with cerebrospinal fluid production.
Laura Pellegrini, Claudia Bonfio, Jessica Chadwick, Farida Begum, Mark Skehel, Madeline A Lancaster. Science 2020
90
28

Self-formation of functional adenohypophysis in three-dimensional culture.
Hidetaka Suga, Taisuke Kadoshima, Maki Minaguchi, Masatoshi Ohgushi, Mika Soen, Tokushige Nakano, Nozomu Takata, Takafumi Wataya, Keiko Muguruma, Hiroyuki Miyoshi,[...]. Nature 2011
297
28

Modeling human cortical development in vitro using induced pluripotent stem cells.
Jessica Mariani, Maria Vittoria Simonini, Dean Palejev, Livia Tomasini, Gianfilippo Coppola, Anna M Szekely, Tamas L Horvath, Flora M Vaccarino. Proc Natl Acad Sci U S A 2012
307
28

Embryonic stem cell lines derived from human blastocysts.
J A Thomson, J Itskovitz-Eldor, S S Shapiro, M A Waknitz, J J Swiergiel, V S Marshall, J M Jones. Science 1998
28

Specification of positional identity in forebrain organoids.
Gustav Y Cederquist, James J Asciolla, Jason Tchieu, Ryan M Walsh, Daniela Cornacchia, Marilyn D Resh, Lorenz Studer. Nat Biotechnol 2019
102
28

Functional and evolutionary insights into human brain development through global transcriptome analysis.
Matthew B Johnson, Yuka Imamura Kawasawa, Christopher E Mason, Zeljka Krsnik, Giovanni Coppola, Darko Bogdanović, Daniel H Geschwind, Shrikant M Mane, Matthew W State, Nenad Sestan. Neuron 2009
400
28


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.