A citation-based method for searching scientific literature

Alexander Carver, Xiaodong Zhang. Semin Cell Dev Biol 2021
Times Cited: 3







List of co-cited articles
4 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Rad51 paralogues Rad55-Rad57 balance the antirecombinase Srs2 in Rad51 filament formation.
Jie Liu, Ludovic Renault, Xavier Veaute, Francis Fabre, Henning Stahlberg, Wolf-Dietrich Heyer. Nature 2011
136
66

RAD51 Gene Family Structure and Function.
Braulio Bonilla, Sarah R Hengel, McKenzie K Grundy, Kara A Bernstein. Annu Rev Genet 2020
23
66

Single-molecule analysis reveals cooperative stimulation of Rad51 filament nucleation and growth by mediator proteins.
Ondrej Belan, Consuelo Barroso, Artur Kaczmarczyk, Roopesh Anand, Stefania Federico, Nicola O'Reilly, Matthew D Newton, Erik Maeots, Radoslav I Enchev, Enrique Martinez-Perez,[...]. Mol Cell 2021
15
66

Srs2 prevents Rad51 filament formation by repetitive motion on DNA.
Yupeng Qiu, Edwin Antony, Sultan Doganay, Hye Ran Koh, Timothy M Lohman, Sua Myong. Nat Commun 2013
64
66


Visualization and quantification of nascent RAD51 filament formation at single-monomer resolution.
Andrea Candelli, Jan Thomas Holthausen, Martin Depken, Ineke Brouwer, Mariëlla A M Franker, Margherita Marchetti, Iddo Heller, Stéphanie Bernard, Edwige B Garcin, Mauro Modesti,[...]. Proc Natl Acad Sci U S A 2014
44
33

Multiple start codons and phosphorylation result in discrete Rad52 protein species.
Adriana Antúnez de Mayolo, Michael Lisby, Naz Erdeniz, Tanja Thybo, Uffe H Mortensen, Rodney Rothstein. Nucleic Acids Res 2006
27
33

Conformational strain in the hydrophobic core and its implications for protein folding and design.
Salvador Ventura, Maria Cristina Vega, Emmanuel Lacroix, Isabelle Angrand, Laura Spagnolo, Luis Serrano. Nat Struct Biol 2002
86
33

The human Rad52 protein exists as a heptameric ring.
A Z Stasiak, E Larquet, A Stasiak, S Müller, A Engel, E Van Dyck, S C West, E H Egelman. Curr Biol 2000
150
33


Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast.
Grzegorz Ira, Anna Malkova, Giordano Liberi, Marco Foiani, James E Haber. Cell 2003
451
33

SWISS-MODEL: homology modelling of protein structures and complexes.
Andrew Waterhouse, Martino Bertoni, Stefan Bienert, Gabriel Studer, Gerardo Tauriello, Rafal Gumienny, Florian T Heer, Tjaart A P de Beer, Christine Rempfer, Lorenza Bordoli,[...]. Nucleic Acids Res 2018
33

PCR-mediated deletion of plasmid DNA.
Mattias D Hansson, Kamila Rzeznicka, Matilda Rosenbäck, Mats Hansson, Nick Sirijovski. Anal Biochem 2008
57
33

Unloading of homologous recombination factors is required for restoring double-stranded DNA at damage repair loci.
Yulia Vasianovich, Veronika Altmannova, Oleksii Kotenko, Matthew D Newton, Lumir Krejci, Svetlana Makovets. EMBO J 2017
14
33

Recovery from checkpoint-mediated arrest after repair of a double-strand break requires Srs2 helicase.
Moreshwar B Vaze, Achille Pellicioli, Sang Eun Lee, Grzegorz Ira, Giordano Liberi, Ayelet Arbel-Eden, Marco Foiani, James E Haber. Mol Cell 2002
255
33

Yeast Mph1 helicase dissociates Rad51-made D-loops: implications for crossover control in mitotic recombination.
Rohit Prakash, Dominik Satory, Eloïse Dray, Almas Papusha, Jürgen Scheller, Wilfried Kramer, Lumir Krejci, Hannah Klein, James E Haber, Patrick Sung,[...]. Genes Dev 2009
185
33

Promotion of presynaptic filament assembly by the ensemble of S. cerevisiae Rad51 paralogues with Rad52.
William A Gaines, Stephen K Godin, Faiz F Kabbinavar, Timsi Rao, Andrew P VanDemark, Patrick Sung, Kara A Bernstein. Nat Commun 2015
44
33


Is homologous recombination really an error-free process?
Josée Guirouilh-Barbat, Sarah Lambert, Pascale Bertrand, Bernard S Lopez. Front Genet 2014
60
33

The Shu complex, which contains Rad51 paralogues, promotes DNA repair through inhibition of the Srs2 anti-recombinase.
Kara A Bernstein, Robert J D Reid, Ivana Sunjevaric, Kimberly Demuth, Rebecca C Burgess, Rodney Rothstein. Mol Biol Cell 2011
60
33

Jalview Version 2--a multiple sequence alignment editor and analysis workbench.
Andrew M Waterhouse, James B Procter, David M A Martin, Michèle Clamp, Geoffrey J Barton. Bioinformatics 2009
33

Mechanism of eukaryotic homologous recombination.
Joseph San Filippo, Patrick Sung, Hannah Klein. Annu Rev Biochem 2008
33

Structure of the single-strand annealing domain of human RAD52 protein.
Martin R Singleton, Lois M Wentzell, Yilun Liu, Stephen C West, Dale B Wigley. Proc Natl Acad Sci U S A 2002
165
33

DNA Repair: The Search for Homology.
James E Haber. Bioessays 2018
44
33

Real-time measurements of the nucleation, growth and dissociation of single Rad51-DNA nucleoprotein filaments.
Judith Miné, Ludovic Disseau, Masayuki Takahashi, Giovanni Cappello, Marie Dutreix, Jean-Louis Viovy. Nucleic Acids Res 2007
50
33

DNA annealing mediated by Rad52 and Rad59 proteins.
Yun Wu, Tomohiko Sugiyama, Stephen C Kowalczykowski. J Biol Chem 2006
58
33

DNA helicase Srs2 disrupts the Rad51 presynaptic filament.
Lumir Krejci, Stephen Van Komen, Ying Li, Jana Villemain, Mothe Sreedhar Reddy, Hannah Klein, Thomas Ellenberger, Patrick Sung. Nature 2003
474
33

Crystal structure of the homologous-pairing domain from the human Rad52 recombinase in the undecameric form.
Wataru Kagawa, Hitoshi Kurumizaka, Ryuichiro Ishitani, Shuya Fukai, Osamu Nureki, Takehiko Shibata, Shigeyuki Yokoyama. Mol Cell 2002
163
33


Rad52-Rad51 association is essential to protect Rad51 filaments against Srs2, but facultative for filament formation.
Emilie Ma, Pauline Dupaigne, Laurent Maloisel, Raphaël Guerois, Eric Le Cam, Eric Coïc. Elife 2018
12
33


Rad51 protein controls Rad52-mediated DNA annealing.
Yun Wu, Noriko Kantake, Tomohiko Sugiyama, Stephen C Kowalczykowski. J Biol Chem 2008
61
33




SIR2 and SIR4 interactions differ in core and extended telomeric heterochromatin in yeast.
S Strahl-Bolsinger, A Hecht, K Luo, M Grunstein. Genes Dev 1997
583
33

Role of the Rad52 amino-terminal DNA binding activity in DNA strand capture in homologous recombination.
Idina Shi, Swee C L Hallwyl, Changhyun Seong, Uffe Mortensen, Rodney Rothstein, Patrick Sung. J Biol Chem 2009
35
33

Rad52 forms ring structures and co-operates with RPA in single-strand DNA annealing.
A Shinohara, M Shinohara, T Ohta, S Matsuda, T Ogawa. Genes Cells 1998
225
33


Mismatch repair during homologous and homeologous recombination.
Maria Spies, Richard Fishel. Cold Spring Harb Perspect Biol 2015
74
33

The Srs2 helicase prevents recombination by disrupting Rad51 nucleoprotein filaments.
Xavier Veaute, Josette Jeusset, Christine Soustelle, Stephen C Kowalczykowski, Eric Le Cam, Francis Fabre. Nature 2003
459
33

DNA strand annealing is promoted by the yeast Rad52 protein.
U H Mortensen, C Bendixen, I Sunjevaric, R Rothstein. Proc Natl Acad Sci U S A 1996
368
33

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
S F Altschul, T L Madden, A A Schäffer, J Zhang, Z Zhang, W Miller, D J Lipman. Nucleic Acids Res 1997
33

The Srs2 helicase activity is stimulated by Rad51 filaments on dsDNA: implications for crossover incidence during mitotic recombination.
Pauline Dupaigne, Cyrille Le Breton, Francis Fabre, Serge Gangloff, Eric Le Cam, Xavier Veaute. Mol Cell 2008
97
33

SUMO-modified PCNA recruits Srs2 to prevent recombination during S phase.
Boris Pfander, George-Lucian Moldovan, Meik Sacher, Carsten Hoege, Stefan Jentsch. Nature 2005
464
33

Role of Cdc48/p97 as a SUMO-targeted segregase curbing Rad51-Rad52 interaction.
Steven Bergink, Tim Ammon, Maximilian Kern, Lothar Schermelleh, Heinrich Leonhardt, Stefan Jentsch. Nat Cell Biol 2013
93
33

Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements.
A A Schäffer, L Aravind, T L Madden, S Shavirin, J L Spouge, Y I Wolf, E V Koonin, S F Altschul. Nucleic Acids Res 2001
915
33

A molecular genetic dissection of the evolutionarily conserved N terminus of yeast Rad52.
Uffe H Mortensen, Naz Erdeniz, Qi Feng, Rodney Rothstein. Genetics 2002
64
33

Human RAD52 exhibits two modes of self-association.
W Ranatunga, D Jackson, J A Lloyd, A L Forget, K L Knight, G E Borgstahl. J Biol Chem 2001
52
33



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.