A citation-based method for searching scientific literature

Candace S Y Chan, Nicolas Lonfat, Rong Zhao, Alexander E Davis, Liang Li, Man-Ru Wu, Cheng-Hui Lin, Zhe Ji, Constance L Cepko, Sui Wang. Development 2020
Times Cited: 5







List of co-cited articles
22 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Genome engineering using the CRISPR-Cas9 system.
F Ann Ran, Patrick D Hsu, Jason Wright, Vineeta Agarwala, David A Scott, Feng Zhang. Nat Protoc 2013
40

Generation of three-dimensional retinal tissue with functional photoreceptors from human iPSCs.
Xiufeng Zhong, Christian Gutierrez, Tian Xue, Christopher Hampton, M Natalia Vergara, Li-Hui Cao, Ann Peters, Tea Soon Park, Elias T Zambidis, Jason S Meyer,[...]. Nat Commun 2014
397
40

Induction of pluripotent stem cells from adult human fibroblasts by defined factors.
Kazutoshi Takahashi, Koji Tanabe, Mari Ohnuki, Megumi Narita, Tomoko Ichisaka, Kiichiro Tomoda, Shinya Yamanaka. Cell 2007
40


Onecut1 and Onecut2 redundantly regulate early retinal cell fates during development.
Darshan Sapkota, Hemabindu Chintala, Fuguo Wu, Steven J Fliesler, Zihua Hu, Xiuqian Mu. Proc Natl Acad Sci U S A 2014
51
40

Otx2 and Onecut1 promote the fates of cone photoreceptors and horizontal cells and repress rod photoreceptors.
Mark M Emerson, Natalia Surzenko, Jillian J Goetz, Jeffrey Trimarchi, Constance L Cepko. Dev Cell 2013
64
40

Enhancer transcription identifies cis-regulatory elements for photoreceptor cell types.
Carlos Perez-Cervantes, Linsin A Smith, Rangarajan D Nadadur, Andrew E O Hughes, Sui Wang, Joseph C Corbo, Constance Cepko, Nicolas Lonfat, Ivan P Moskowitz. Development 2020
6
40

OTX2 represses sister cell fate choices in the developing retina to promote photoreceptor specification.
Miruna Georgiana Ghinia Tegla, Diego F Buenaventura, Diana Y Kim, Cassandra Thakurdin, Kevin C Gonzalez, Mark M Emerson. Elife 2020
9
40

Retinoid X receptor (gamma) is necessary to establish the S-opsin gradient in cone photoreceptors of the developing mouse retina.
Melanie R Roberts, Anita Hendrickson, Christopher R McGuire, Thomas A Reh. Invest Ophthalmol Vis Sci 2005
147
40

Functional roles of Otx2 transcription factor in postnatal mouse retinal development.
Chieko Koike, Akihiro Nishida, Shinji Ueno, Hiromitsu Saito, Rikako Sanuki, Shigeru Sato, Akiko Furukawa, Shinichi Aizawa, Isao Matsuo, Noboru Suzuki,[...]. Mol Cell Biol 2007
125
40

Graded Otx2 activities demonstrate dose-sensitive eye and retina phenotypes.
Clémence Bernard, Hyoung-Tai Kim, Raoul Torero Ibad, Eun Jung Lee, Manuel Simonutti, Serge Picaud, Dario Acampora, Antonio Simeone, Ariel A Di Nardo, Alain Prochiantz,[...]. Hum Mol Genet 2014
23
40

NeuroD1 regulates expression of thyroid hormone receptor 2 and cone opsins in the developing mouse retina.
Hong Liu, Paige Etter, Susan Hayes, Iwan Jones, Branden Nelson, Byron Hartman, Douglas Forrest, Thomas A Reh. J Neurosci 2008
48
40

Transcription factor Olig2 defines subpopulations of retinal progenitor cells biased toward specific cell fates.
Brian P Hafler, Natalia Surzenko, Kevin T Beier, Claudio Punzo, Jeffrey M Trimarchi, Jennifer H Kong, Constance L Cepko. Proc Natl Acad Sci U S A 2012
77
40

Otx2 homeobox gene controls retinal photoreceptor cell fate and pineal gland development.
Akihiro Nishida, Akiko Furukawa, Chieko Koike, Yasuo Tano, Shinichi Aizawa, Isao Matsuo, Takahisa Furukawa. Nat Neurosci 2003
398
40

Onecut 1 and Onecut 2 are potential regulators of mouse retinal development.
Fuguo Wu, Darshan Sapkota, Renzhong Li, Xiuqian Mu. J Comp Neurol 2012
44
40

Dkk3-Cre BAC transgenic mouse line: a tool for highly efficient gene deletion in retinal progenitor cells.
Shigeru Sato, Tatsuya Inoue, Koji Terada, Isao Matsuo, Shinichi Aizawa, Yasuo Tano, Takashi Fujikado, Takahisa Furukawa. Genesis 2007
65
40

Single-Cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification.
Brian S Clark, Genevieve L Stein-O'Brien, Fion Shiau, Gabrielle H Cannon, Emily Davis-Marcisak, Thomas Sherman, Clayton P Santiago, Thanh V Hoang, Fatemeh Rajaii, Rebecca E James-Esposito,[...]. Neuron 2019
95
40

Photoreceptor cell fate specification in vertebrates.
Joseph A Brzezinski, Thomas A Reh. Development 2015
73
40

The homeobox gene Otx2 in development and disease.
Francis Beby, Thomas Lamonerie. Exp Eye Res 2013
72
40


Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina.
Anand Swaroop, Douglas Kim, Douglas Forrest. Nat Rev Neurosci 2010
319
40

Generation of Retinal Organoids with Mature Rods and Cones from Urine-Derived Human Induced Pluripotent Stem Cells.
Guilan Li, Bingbing Xie, Liwen He, Tiancheng Zhou, Guanjie Gao, Shengxu Liu, Guangjin Pan, Jian Ge, Fuhua Peng, Xiufeng Zhong. Stem Cells Int 2018
21
20

Generation of a human iPSC line, INMi003-A, with a missense mutation in CRX associated with autosomal dominant cone-rod dystrophy.
Nejla Erkilic, Carla Sanjurjo-Soriano, Michalitsa Diakatou, Gaël Manes, Gregor Dubois, Christian P Hamel, Isabelle Meunier, Vasiliki Kalatzis. Stem Cell Res 2019
3
33

Dual role of Nr2e3 in photoreceptor development and maintenance.
Andrea L Webber, Paul Hodor, Catherine J Thut, Thomas F Vogt, Theresa Zhang, Daniel J Holder, Konstantin Petrukhin. Exp Eye Res 2008
29
20

Photoreceptor-specific nuclear receptor NR2E3 functions as a transcriptional activator in rod photoreceptors.
Hong Cheng, Hemant Khanna, Edwin C T Oh, David Hicks, Kenneth P Mitton, Anand Swaroop. Hum Mol Genet 2004
176
20

Six classes of nuclear localization signals specific to different binding grooves of importin alpha.
Shunichi Kosugi, Masako Hasebe, Nobutaka Matsumura, Hideaki Takashima, Etsuko Miyamoto-Sato, Masaru Tomita, Hiroshi Yanagawa. J Biol Chem 2009
356
20


CRISPR-Trap: a clean approach for the generation of gene knockouts and gene replacements in human cells.
Stefan Reber, Jonas Mechtersheimer, Sofia Nasif, Julio Aguila Benitez, Martino Colombo, Michal Domanski, Daniel Jutzi, Eva Hedlund, Marc-David Ruepp. Mol Biol Cell 2018
16
20


Structure and Function of the Nuclear Receptor Superfamily and Current Targeted Therapies of Prostate Cancer.
Baylee A Porter, Maria A Ortiz, Gennady Bratslavsky, Leszek Kotula. Cancers (Basel) 2019
6
20

Dominant Retinitis Pigmentosa, p.Gly56Arg Mutation in NR2E3: Phenotype in a Large Cohort of 24 Cases.
Fiona Blanco-Kelly, María García Hoyos, Miguel Angel Lopez Martinez, Maria Isabel Lopez-Molina, Rosa Riveiro-Alvarez, Patricia Fernandez-San Jose, Almudena Avila-Fernandez, Marta Corton, Jose M Millan, Blanca García Sandoval,[...]. PLoS One 2016
11
20

Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition.
Benjamin P Kleinstiver, Michelle S Prew, Shengdar Q Tsai, Nhu T Nguyen, Ved V Topkar, Zongli Zheng, J Keith Joung. Nat Biotechnol 2015
290
20

Antisense Oligonucleotide-Based Downregulation of the G56R Pathogenic Variant Causing NR2E3-Associated Autosomal Dominant Retinitis Pigmentosa.
Sarah Naessens, Laurien Ruysschaert, Steve Lefever, Frauke Coppieters, Elfride De Baere. Genes (Basel) 2019
7
20

Recognition and Degradation of Mislocalized Proteins in Health and Disease.
Ramanujan S Hegde, Eszter Zavodszky. Cold Spring Harb Perspect Biol 2019
12
20

Non-syndromic retinitis pigmentosa.
Sanne K Verbakel, Ramon A C van Huet, Camiel J F Boon, Anneke I den Hollander, Rob W J Collin, Caroline C W Klaver, Carel B Hoyng, Ronald Roepman, B Jeroen Klevering. Prog Retin Eye Res 2018
200
20

The nuclear receptor NR2E3 plays a role in human retinal photoreceptor differentiation and degeneration.
Ann H Milam, Linda Rose, Artur V Cideciyan, Mark R Barakat, Wai-Xing Tang, Nisha Gupta, Tomas S Aleman, Alan F Wright, Edwin M Stone, Val C Sheffield,[...]. Proc Natl Acad Sci U S A 2002
166
20

Mutations in the CEP290 (NPHP6) gene are a frequent cause of Leber congenital amaurosis.
Anneke I den Hollander, Robert K Koenekoop, Suzanne Yzer, Irma Lopez, Maarten L Arends, Krysta E J Voesenek, Marijke N Zonneveld, Tim M Strom, Thomas Meitinger, Han G Brunner,[...]. Am J Hum Genet 2006
428
20

A deletion in a photoreceptor-specific nuclear receptor mRNA causes retinal degeneration in the rd7 mouse.
N B Akhmedov, N I Piriev, B Chang, A L Rapoport, N L Hawes, P M Nishina, S Nusinowitz, J R Heckenlively, T H Roderick, C A Kozak,[...]. Proc Natl Acad Sci U S A 2000
167
20

CRISPR/Cas9 in Genome Editing and Beyond.
Haifeng Wang, Marie La Russa, Lei S Qi. Annu Rev Biochem 2016
441
20


In vivo Editing of the Human Mutant Rhodopsin Gene by Electroporation of Plasmid-based CRISPR/Cas9 in the Mouse Retina.
Maria Carmela Latella, Maria Teresa Di Salvo, Fabienne Cocchiarella, Daniela Benati, Giulia Grisendi, Antonella Comitato, Valeria Marigo, Alessandra Recchia. Mol Ther Nucleic Acids 2016
91
20

Genome Editing as a Treatment for the Most Prevalent Causative Genes of Autosomal Dominant Retinitis Pigmentosa.
Michalitsa Diakatou, Gaël Manes, Beatrice Bocquet, Isabelle Meunier, Vasiliki Kalatzis. Int J Mol Sci 2019
16
20

Mutations in the DNA-binding domain of NR2E3 affect in vivo dimerization and interaction with CRX.
Raphael Roduit, Pascal Escher, Daniel F Schorderet. PLoS One 2009
26
20

Development of a gene-editing approach to restore vision loss in Leber congenital amaurosis type 10.
Morgan L Maeder, Michael Stefanidakis, Christopher J Wilson, Reshica Baral, Luis Alberto Barrera, George S Bounoutas, David Bumcrot, Hoson Chao, Dawn M Ciulla, Jennifer A DaSilva,[...]. Nat Med 2019
180
20

The nuclear receptor superfamily.
Marc Robinson-Rechavi, Hector Escriva Garcia, Vincent Laudet. J Cell Sci 2003
301
20

Cas9/sgRNA selective targeting of the P23H Rhodopsin mutant allele for treating retinitis pigmentosa by intravitreal AAV9.PHP.B-based delivery.
Serena G Giannelli, Mirko Luoni, Valerio Castoldi, Luca Massimino, Tommaso Cabassi, Debora Angeloni, Gian Carlo Demontis, Letizia Leocani, Massimiliano Andreazzoli, Vania Broccoli. Hum Mol Genet 2018
55
20

The Gly56Arg mutation in NR2E3 accounts for 1-2% of autosomal dominant retinitis pigmentosa.
Anisa I Gire, Lori S Sullivan, Sara J Bowne, David G Birch, Dianna Hughbanks-Wheaton, John R Heckenlively, Stephen P Daiger. Mol Vis 2007
43
20

Recurrent mutation in the first zinc finger of the orphan nuclear receptor NR2E3 causes autosomal dominant retinitis pigmentosa.
Frauke Coppieters, Bart P Leroy, Diane Beysen, Jan Hellemans, Karolien De Bosscher, Guy Haegeman, Kirsten Robberecht, Wim Wuyts, Paul J Coucke, Elfride De Baere. Am J Hum Genet 2007
80
20

CRISPR/Cas9-Mediated Genome Editing as a Therapeutic Approach for Leber Congenital Amaurosis 10.
Guo-Xiang Ruan, Elizabeth Barry, Dan Yu, Michael Lukason, Seng H Cheng, Abraham Scaria. Mol Ther 2017
134
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.