A citation-based method for searching scientific literature

Natasha Kamerlin, Mickaël G Delcey, Sergio Manzetti, David van der Spoel. J Chem Inf Model 2020
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Binding specificities of estrogen receptor with perfluorinated compounds: A cross species comparison.
Zhiqiang Qiu, Kaili Qu, Feng Luan, Yaquan Liu, Yu Zhu, Yongna Yuan, Hongyu Li, Haixia Zhang, Ying Hai, Chunyan Zhao. Environ Int 2020
25
50

Pentabromoethylbenzene Exposure Induces Transcriptome Aberration and Thyroid Dysfunction: In Vitro, in Silico, and in Vivo Investigations.
Liping Lu, Hao Wu, Shixuan Cui, Tingjie Zhan, Chunlong Zhang, Shaoyong Lu, Weiping Liu, Shulin Zhuang. Environ Sci Technol 2020
20
50

Methods for Measuring the Concentrations of Proteins.
Clara L Kielkopf, William Bauer, Ina L Urbatsch. Cold Spring Harb Protoc 2020
7
50

Detrimental effects of temephos on male fertility: An in vitro study on a mouse model.
So-Hye Kim, Jeong-Won Bae, Dae-Hyun Kim, Dae-Jin Jeong, Jae Jung Ha, Jun Koo Yi, Woo-Sung Kwon. Reprod Toxicol 2020
7
50

Theoretical Studies Applied to the Evaluation of the DFPase Bioremediation Potential against Chemical Warfare Agents Intoxication.
Flávia V Soares, Alexandre A de Castro, Ander F Pereira, Daniel H S Leal, Daiana T Mancini, Ondrej Krejcar, Teodorico C Ramalho, Elaine F F da Cunha, Kamil Kuca. Int J Mol Sci 2018
13
50


Organophosphorus compounds and oximes: a critical review.
Franz Worek, Horst Thiermann, Timo Wille. Arch Toxicol 2020
34
50


VMD: visual molecular dynamics.
W Humphrey, A Dalke, K Schulten. J Mol Graph 1996
50

Successes and challenges in simulating the folding of large proteins.
Anne Gershenson, Shachi Gosavi, Pietro Faccioli, Patrick L Wintrode. J Biol Chem 2020
16
50

Methyl parathion causes genetic damage in sperm and disrupts the permeability of the blood-testis barrier by an oxidant mechanism in mice.
Mayrut Urióstegui-Acosta, Pamela Tello-Mora, María de Jesús Solís-Heredia, José Mario Ortega-Olvera, Belem Piña-Guzmán, Dolores Martín-Tapia, Lorenza González-Mariscal, Betzabet Quintanilla-Vega. Toxicology 2020
13
50

Quantitative Structure-Activity Relationship Models for Predicting Inflammatory Potential of Metal Oxide Nanoparticles.
Yang Huang, Xuehua Li, Shujuan Xu, Huizhen Zheng, Lili Zhang, Jingwen Chen, Huixiao Hong, Rebecca Kusko, Ruibin Li. Environ Health Perspect 2020
20
50

Definition and testing of the GROMOS force-field versions 54A7 and 54B7.
Nathan Schmid, Andreas P Eichenberger, Alexandra Choutko, Sereina Riniker, Moritz Winger, Alan E Mark, Wilfred F van Gunsteren. Eur Biophys J 2011
50


Design, synthesis, in silico studies and in vitro evaluation of isatin-pyridine oximes hybrids as novel acetylcholinesterase reactivators.
Daniel A S Kitagawa, Rafael B Rodrigues, Thiago N Silva, Wellington V Dos Santos, Vinicius C V da Rocha, Joyce S F D de Almeida, Leandro B Bernardo, Taynara Carvalho-Silva, Cintia N Ferreira, Angelo A T da Silva,[...]. J Enzyme Inhib Med Chem 2021
2
50

Atomic structure of acetylcholinesterase from Torpedo californica: a prototypic acetylcholine-binding protein.
J L Sussman, M Harel, F Frolow, C Oefner, A Goldman, L Toker, I Silman. Science 1991
50

Induced fluorescent enhancement of protein-directed synthesized gold nanoclusters for selective and sensitive detection of flame retardants.
Huangrui Liu, Nengwu Zhu, Minting Li, Xixian Huang, Pingxiao Wu, Zhilin Hu, Jiangtao Shuai. Sci Total Environ 2020
3
50

Recent Advances in Virtual Screening for Cholinesterase Inhibitors.
Jared A Miles, Benjamin P Ross. ACS Chem Neurosci 2021
14
50

Torpedo californica acetylcholinesterase is stabilized by binding of a divalent metal ion to a novel and versatile 4D motif.
Israel Silman, Valery L Shnyrov, Yacov Ashani, Esther Roth, Anne Nicolas, Joel L Sussman, Lev Weiner. Protein Sci 2021
3
50


Development of technologies applied to the biodegradation of warfare nerve agents: Theoretical evidence for asymmetric homogeneous catalysis.
Ander Francisco Pereira, Alexandre A de Castro, Flavia Villela Soares, Daniel Henriques Soares Leal, Elaine F F da Cunha, Daiana Teixeira Mancini, Teodorico C Ramalho. Chem Biol Interact 2019
9
50

Rapid adaptation of Chironomus yoshimatsui to acetylcholinesterase inhibitors (pyraclofos and pirimicarb) in a multi-generation study.
Makoto Ishimota, Risako Tajiki-Nishino, Tomoki Fukuyama, Naruto Tomiyama. J Environ Sci Health B 2020
4
50

Combining molecular dynamics simulations and experimental analyses in protein misfolding.
Holger Wille, Lyudmyla Dorosh, Sara Amidian, Gerold Schmitt-Ulms, Maria Stepanova. Adv Protein Chem Struct Biol 2019
8
50

Comparison of Implicit and Explicit Solvent Models for the Calculation of Solvation Free Energy in Organic Solvents.
Jin Zhang, Haiyang Zhang, Tao Wu, Qi Wang, David van der Spoel. J Chem Theory Comput 2017
72
50



Synergistic effect of fenpropathrin and paclobutrazol on early life stages of zebrafish (Danio rerio).
Yanhua Wang, Guiling Yang, Weifeng Shen, Chao Xu, Shanshan Di, Dou Wang, Xinfang Li, Xinquan Wang, Qiang Wang. Environ Pollut 2020
18
50

Interplay between Conformational Entropy and Solvation Entropy in Protein-Ligand Binding.
Maria Luisa Verteramo, Olof Stenström, Majda Misini Ignjatović, Octav Caldararu, Martin A Olsson, Francesco Manzoni, Hakon Leffler, Esko Oksanen, Derek T Logan, Ulf J Nilsson,[...]. J Am Chem Soc 2019
58
50

Variability in docking success rates due to dataset preparation.
Christopher R Corbeil, Christopher I Williams, Paul Labute. J Comput Aided Mol Des 2012
205
50

GROMACS: fast, flexible, and free.
David Van Der Spoel, Erik Lindahl, Berk Hess, Gerrit Groenhof, Alan E Mark, Herman J C Berendsen. J Comput Chem 2005
50

Review about Structure and Evaluation of Reactivators of Acetylcholinesterase Inhibited with Neurotoxic Organophosphorus Compounds.
José Daniel Figueroa-Villar, Elaine C Petronilho, Kamil Kuca, Tanos C C Franca. Curr Med Chem 2021
8
50

Screening for Efficacious Anticonvulsants and Neuroprotectants in Delayed Treatment Models of Organophosphate-induced Status Epilepticus.
Bryan S Barker, Jay Spampanato, Hilary S McCarren, Melissa Smolik, Cecelia E Jackson, Eden N Hornung, David T Yeung, F Edward Dudek, John H McDonough. Neuroscience 2020
11
50

Computational Investigation on the p53-MDM2 Interaction Using the Potential of Mean Force Study.
Pundarikaksha Das, Venkata Satish Kumar Mattaparthi. ACS Omega 2020
3
50

ProPOSE: Direct Exhaustive Protein-Protein Docking with Side Chain Flexibility.
Hervé Hogues, Francis Gaudreault, Christopher R Corbeil, Christophe Deprez, Traian Sulea, Enrico O Purisima. J Chem Theory Comput 2018
10
50

The organophosphate malathion disturbs gut microbiome development and the quorum-Sensing system.
Bei Gao, Liang Chi, Pengcheng Tu, Xiaoming Bian, Jesse Thomas, Hongyu Ru, Kun Lu. Toxicol Lett 2018
14
50


Partitioning of organophosphorus pesticides into phosphatidylcholine small unilamellar vesicles studied by second-derivative spectrophotometry.
Shigehiko Takegami, Keisuke Kitamura, Mayuko Ohsugi, Aya Ito, Tatsuya Kitade. Spectrochim Acta A Mol Biomol Spectrosc 2015
5
50

Slight difference in the isomeric oximes K206 and K203 makes huge difference for the reactivation of organophosphorus-inhibited AChE: Theoretical and experimental aspects.
Daniel A Polisel, Alexandre A de Castro, Daiana T Mancini, Elaine F F da Cunha, Tanos C C França, Teodorico C Ramalho, Kamil Kuca. Chem Biol Interact 2019
9
50


Structure and Energetics of Ligand-Fluorine Interactions with Galectin-3 Backbone and Side-Chain Amides: Insight into Solvation Effects and Multipolar Interactions.
Rohit Kumar, Majda Misini Ignjatović, Kristoffer Peterson, Martin Olsson, Hakon Leffler, Ulf Ryde, Ulf J Nilsson, Derek T Logan. ChemMedChem 2019
16
50

Binding Interactions of Ergotamine and Dihydroergotamine to 5-Hydroxytryptamine Receptor 1B (5-HT1b) Using Molecular Dynamics Simulations and Dynamic Network Analysis.
Holli-Joi Sullivan, Amanda Tursi, Kelly Moore, Alexandra Campbell, Cecilia Floyd, Chun Wu. J Chem Inf Model 2020
2
50



Shortcuts for faster image creation in PyMOL.
Blaine H M Mooers. Protein Sci 2020
43
50

Molecular Graphics: Bridging Structural Biologists and Computer Scientists.
Xavier Martinez, Michael Krone, Naif Alharbi, Alexander S Rose, Robert S Laramee, Sean O'Donoghue, Marc Baaden, Matthieu Chavent. Structure 2019
18
50


Organophosphorus insecticide interacts with the pheromone-binding proteins of Athetis lepigone: Implication for olfactory dysfunction.
Ya-Nan Zhang, Ji-Wei Xu, Xiao-Chun Zhang, Xiao-Qing Zhang, Lu-Lu Li, Xiaohui Yuan, Ding-Ze Mang, Xiu-Yun Zhu, Fan Zhang, Youssef Dewer,[...]. J Hazard Mater 2020
16
50

AMBER and CHARMM Force Fields Inconsistently Portray the Microscopic Details of Phosphorylation.
Jiří Vymětal, Veronika Jurásková, Jiří Vondrášek. J Chem Theory Comput 2019
10
50

Recent developments in structural studies on acetylcholinesterase.
Israel Silman, Joel L Sussman. J Neurochem 2017
11
50

Target Enzyme in Alzheimer's Disease: Acetylcholinesterase Inhibitors.
Mridula Saxena, Ragini Dubey. Curr Top Med Chem 2019
56
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.