A citation-based method for searching scientific literature

Thai Pham, Ankush Tyagi, Yu-Sheng Wang, Jia Guo. WIREs Mech Dis 2021
Times Cited: 4







List of co-cited articles
37 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Highly Multiplexed Single-Cell Protein Analysis.
Manas Mondal, Renjie Liao, Jia Guo. Chemistry 2018
9
100

Multispectral labeling of antibodies with polyfluorophores on a DNA backbone and application in cellular imaging.
Jia Guo, Shenliang Wang, Nan Dai, Yin Nah Teo, Eric T Kool. Proc Natl Acad Sci U S A 2011
47
75

Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH.
Chee-Huat Linus Eng, Michael Lawson, Qian Zhu, Ruben Dries, Noushin Koulena, Yodai Takei, Jina Yun, Christopher Cronin, Christoph Karp, Guo-Cheng Yuan,[...]. Nature 2019
370
75


Highly multiplexed single-cell in situ RNA and DNA analysis with bioorthogonal cleavable fluorescent oligonucleotides.
Manas Mondal, Renjie Liao, Christopher D Nazaroff, Adam D Samuel, Jia Guo. Chem Sci 2018
12
75

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia.
El-ad David Amir, Kara L Davis, Michelle D Tadmor, Erin F Simonds, Jacob H Levine, Sean C Bendall, Daniel K Shenfeld, Smita Krishnaswamy, Garry P Nolan, Dana Pe'er. Nat Biotechnol 2013
941
75

Highly multiplexed subcellular RNA sequencing in situ.
Je Hyuk Lee, Evan R Daugharthy, Jonathan Scheiman, Reza Kalhor, Joyce L Yang, Thomas C Ferrante, Richard Terry, Sauveur S F Jeanty, Chao Li, Ryoji Amamoto,[...]. Science 2014
475
50

High-throughput single-cell gene-expression profiling with multiplexed error-robust fluorescence in situ hybridization.
Jeffrey R Moffitt, Junjie Hao, Guiping Wang, Kok Hao Chen, Hazen P Babcock, Xiaowei Zhuang. Proc Natl Acad Sci U S A 2016
169
50

Spatially resolved transcriptomics and beyond.
Nicola Crosetto, Magda Bienko, Alexander van Oudenaarden. Nat Rev Genet 2015
232
50

Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance.
Sydney M Shaffer, Margaret C Dunagin, Stefan R Torborg, Eduardo A Torre, Benjamin Emert, Clemens Krepler, Marilda Beqiri, Katrin Sproesser, Patricia A Brafford, Min Xiao,[...]. Nature 2017
432
50

Proteomics. Tissue-based map of the human proteome.
Mathias Uhlén, Linn Fagerberg, Björn M Hallström, Cecilia Lindskog, Per Oksvold, Adil Mardinoglu, Åsa Sivertsson, Caroline Kampf, Evelina Sjöstedt, Anna Asplund,[...]. Science 2015
50

RNA imaging. Spatially resolved, highly multiplexed RNA profiling in single cells.
Kok Hao Chen, Alistair N Boettiger, Jeffrey R Moffitt, Siyuan Wang, Xiaowei Zhuang. Science 2015
714
50

Single-cell in situ RNA profiling by sequential hybridization.
Eric Lubeck, Ahmet F Coskun, Timur Zhiyentayev, Mubhij Ahmad, Long Cai. Nat Methods 2014
343
50

Chemical methods for the simultaneous quantitation of metabolites and proteins from single cells.
Min Xue, Wei Wei, Yapeng Su, Jungwoo Kim, Young Shik Shin, Wilson X Mai, David A Nathanson, James R Heath. J Am Chem Soc 2015
64
50

Highly multiplexed single-cell analysis of formalin-fixed, paraffin-embedded cancer tissue.
Michael J Gerdes, Christopher J Sevinsky, Anup Sood, Sudeshna Adak, Musodiq O Bello, Alexander Bordwell, Ali Can, Alex Corwin, Sean Dinn, Robert J Filkins,[...]. Proc Natl Acad Sci U S A 2013
301
50

Next-generation proteomics: towards an integrative view of proteome dynamics.
A F Maarten Altelaar, Javier Munoz, Albert J R Heck. Nat Rev Genet 2013
418
50

Protein microarrays: molecular profiling technologies for clinical specimens.
Virginia Espina, Arpita I Mehta, Mary E Winters, Valerie Calvert, Julia Wulfkuhle, Emanuel F Petricoin, Lance A Liotta. Proteomics 2003
168
50

Highly Multiplexed Single-Cell In Situ Protein Analysis with Cleavable Fluorescent Antibodies.
Manas Mondal, Renjie Liao, Lu Xiao, Taylor Eno, Jia Guo. Angew Chem Int Ed Engl 2017
33
50

Multiplexed protein maps link subcellular organization to cellular states.
Gabriele Gut, Markus D Herrmann, Lucas Pelkmans. Science 2018
112
50

Multiplexed ion beam imaging of human breast tumors.
Michael Angelo, Sean C Bendall, Rachel Finck, Matthew B Hale, Chuck Hitzman, Alexander D Borowsky, Richard M Levenson, John B Lowe, Scot D Liu, Shuchun Zhao,[...]. Nat Med 2014
452
50

Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry.
Charlotte Giesen, Hao A O Wang, Denis Schapiro, Nevena Zivanovic, Andrea Jacobs, Bodo Hattendorf, Peter J Schüffler, Daniel Grolimund, Joachim M Buhmann, Simone Brandt,[...]. Nat Methods 2014
693
50

Analyzing proteome topology and function by automated multidimensional fluorescence microscopy.
Walter Schubert, Bernd Bonnekoh, Ansgar J Pommer, Lars Philipsen, Raik Böckelmann, Yanina Malykh, Harald Gollnick, Manuela Friedenberger, Marcus Bode, Andreas W M Dress. Nat Biotechnol 2006
256
50

Configuring robust DNA strand displacement reactions for in situ molecular analyses.
Dzifa Y Duose, Ryan M Schweller, Jan Zimak, Arthur R Rogers, Walter N Hittelman, Michael R Diehl. Nucleic Acids Res 2012
27
50

Contributions of low molecule number and chromosomal positioning to stochastic gene expression.
Attila Becskei, Benjamin B Kaufmann, Alexander van Oudenaarden. Nat Genet 2005
232
50

Noise in eukaryotic gene expression.
William J Blake, Mads KAErn, Charles R Cantor, J J Collins. Nature 2003
959
50

Tissue preparation: Tissue issues.
Nathan Blow. Nature 2007
58
50

Multiplexed in situ immunofluorescence using dynamic DNA complexes.
Ryan M Schweller, Jan Zimak, Dzifa Y Duose, Amina A Qutub, Walter N Hittelman, Michael R Diehl. Angew Chem Int Ed Engl 2012
37
50

Multiple immunofluorescence labelling of formalin-fixed paraffin-embedded (FFPE) tissue.
David Robertson, Kay Savage, Jorge S Reis-Filho, Clare M Isacke. BMC Cell Biol 2008
134
50

Highly Sensitive and Multiplexed In-Situ Protein Profiling with Cleavable Fluorescent Streptavidin.
Renjie Liao, Thai Pham, Diego Mastroeni, Paul D Coleman, Joshua Labaer, Jia Guo. Cells 2020
6
50

Optical imaging techniques in microfluidics and their applications.
Jigang Wu, Guoan Zheng, Lap Man Lee. Lab Chip 2012
47
50

Stochastic gene expression in a single cell.
Michael B Elowitz, Arnold J Levine, Eric D Siggia, Peter S Swain. Science 2002
50

Deep Profiling of Mouse Splenic Architecture with CODEX Multiplexed Imaging.
Yury Goltsev, Nikolay Samusik, Julia Kennedy-Darling, Salil Bhate, Matthew Hale, Gustavo Vazquez, Sarah Black, Garry P Nolan. Cell 2018
290
50

Highly multiplexed imaging of single cells using a high-throughput cyclic immunofluorescence method.
Jia-Ren Lin, Mohammad Fallahi-Sichani, Peter K Sorger. Nat Commun 2015
194
50


SABER amplifies FISH: enhanced multiplexed imaging of RNA and DNA in cells and tissues.
Jocelyn Y Kishi, Sylvain W Lapan, Brian J Beliveau, Emma R West, Allen Zhu, Hiroshi M Sasaki, Sinem K Saka, Yu Wang, Constance L Cepko, Peng Yin. Nat Methods 2019
75
50

Molecular, spatial, and functional single-cell profiling of the hypothalamic preoptic region.
Jeffrey R Moffitt, Dhananjay Bambah-Mukku, Stephen W Eichhorn, Eric Vaughn, Karthik Shekhar, Julio D Perez, Nimrod D Rubinstein, Junjie Hao, Aviv Regev, Catherine Dulac,[...]. Science 2018
289
50


Protease probes built from DNA: multispectral fluorescent DNA-peptide conjugates as caspase chemosensors.
Nan Dai, Jia Guo, Yin Nah Teo, Eric T Kool. Angew Chem Int Ed Engl 2011
22
25

Sequencing technologies - the next generation.
Michael L Metzker. Nat Rev Genet 2010
25

Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probes.
Brian J Beliveau, Eric F Joyce, Nicholas Apostolopoulos, Feyza Yilmaz, Chamith Y Fonseka, Ruth B McCole, Yiming Chang, Jin Billy Li, Tharanga Niroshini Senaratne, Benjamin R Williams,[...]. Proc Natl Acad Sci U S A 2012
211
25

High-performance multiplexed fluorescence in situ hybridization in culture and tissue with matrix imprinting and clearing.
Jeffrey R Moffitt, Junjie Hao, Dhananjay Bambah-Mukku, Tian Lu, Catherine Dulac, Xiaowei Zhuang. Proc Natl Acad Sci U S A 2016
120
25

Multicolor spectral karyotyping of human chromosomes.
E Schröck, S du Manoir, T Veldman, B Schoell, J Wienberg, M A Ferguson-Smith, Y Ning, D H Ledbetter, I Bar-Am, D Soenksen,[...]. Science 1996
25

Efficient nucleic acid detection by templated reductive quencher release.
Raphael M Franzini, Eric T Kool. J Am Chem Soc 2009
106
25


Karyotyping human chromosomes by combinatorial multi-fluor FISH.
M R Speicher, S Gwyn Ballard, D C Ward. Nat Genet 1996
863
25

Methods for the preparation of large quantities of complex single-stranded oligonucleotide libraries.
Yusuf E Murgha, Jean-Marie Rouillard, Erdogan Gulari. PLoS One 2014
31
25

Single-cell gene expression profiling.
Jeffrey M Levsky, Shailesh M Shenoy, Rossanna C Pezo, Robert H Singer. Science 2002
346
25

Design of 240,000 orthogonal 25mer DNA barcode probes.
Qikai Xu, Michael R Schlabach, Gregory J Hannon, Stephen J Elledge. Proc Natl Acad Sci U S A 2009
80
25

Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution.
Bo Huang, Sara A Jones, Boerries Brandenburg, Xiaowei Zhuang. Nat Methods 2008
336
25

An integrated system for DNA sequencing by synthesis using novel nucleotide analogues.
Jia Guo, Lin Yu, Nicholas J Turro, Jingyue Ju. Acc Chem Res 2010
33
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.