A citation-based method for searching scientific literature

Kun Tan, Samantha H Jones, Blue B Lake, Jennifer N Dumdie, Eleen Y Shum, Lingjuan Zhang, Song Chen, Abhishek Sohni, Shivam Pandya, Richard L Gallo, Kun Zhang, Heidi Cook-Andersen, Miles F Wilkinson. Elife 2020
Times Cited: 5







List of co-cited articles
30 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A novel frameshift mutation in UPF3B identified in brothers affected with childhood onset schizophrenia and autism spectrum disorders.
A M Addington, J Gauthier, A Piton, F F Hamdan, A Raymond, N Gogtay, R Miller, J Tossell, J Bakalar, G Inoff-Germain,[...]. Mol Psychiatry 2011
70
40


Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation.
Patrick S Tarpey, F Lucy Raymond, Lam S Nguyen, Jayson Rodriguez, Anna Hackett, Lucianne Vandeleur, Raffaella Smith, Cheryl Shoubridge, Sarah Edkins, Claire Stevens,[...]. Nat Genet 2007
168
40

A Upf3b-mutant mouse model with behavioral and neurogenesis defects.
L Huang, E Y Shum, S H Jones, C-H Lou, J Dumdie, H Kim, A J Roberts, L A Jolly, J L Espinoza, D M Skarbrevik,[...]. Mol Psychiatry 2018
25
40

Nonsense-Mediated mRNA Decay: Pathologies and the Potential for Novel Therapeutics.
Kamila Pawlicka, Umesh Kalathiya, Javier Alfaro. Cancers (Basel) 2020
10
40

Regulation of axon guidance by compartmentalized nonsense-mediated mRNA decay.
Dilek Colak, Sheng-Jian Ji, Bo T Porse, Samie R Jaffrey. Cell 2013
128
40


An alternative branch of the nonsense-mediated decay pathway.
Wai-Kin Chan, Lulu Huang, Jayanthi P Gudikote, Yao-Fu Chang, J Saadi Imam, James A MacLean, Miles F Wilkinson. EMBO J 2007
154
40

Quality and quantity control of gene expression by nonsense-mediated mRNA decay.
Tatsuaki Kurosaki, Maximilian W Popp, Lynne E Maquat. Nat Rev Mol Cell Biol 2019
183
40


Androgen-induced Rhox homeobox genes modulate the expression of AR-regulated genes.
Zhiying Hu, Dineshkumar Dandekar, Peter J O'Shaughnessy, Karel De Gendt, Guido Verhoeven, Miles F Wilkinson. Mol Endocrinol 2010
37
40

Rapid evolution and copy number variation of primate RHOXF2, an X-linked homeobox gene involved in male reproduction and possibly brain function.
Ao-lei Niu, Yin-qiu Wang, Hui Zhang, Cheng-hong Liao, Jin-kai Wang, Rui Zhang, Jun Che, Bing Su. BMC Evol Biol 2011
23
40

Regulated expression of Rhox8 in the mouse ovary: evidence for the role of progesterone and RHOX5 in granulosa cells.
Raquel M Brown, Matthew G Davis, Kanako Hayashi, James A MacLean. Biol Reprod 2013
12
40

Impaired imprinted X chromosome inactivation is responsible for the skewed sex ratio following in vitro fertilization.
Kun Tan, Lei An, Kai Miao, Likun Ren, Zhuocheng Hou, Li Tao, Zhenni Zhang, Xiaodong Wang, Wei Xia, Jinghao Liu,[...]. Proc Natl Acad Sci U S A 2016
31
40

Rhox13 is required for a quantitatively normal first wave of spermatogenesis in mice.
Jonathan T Busada, Ellen K Velte, Nicholas Serra, Kenneth Cook, Bryan A Niedenberger, William D Willis, Eugenia H Goulding, Edward M Eddy, Christopher B Geyer. Reproduction 2016
13
40

Two novel human X-linked homeobox genes, hPEPP1 and hPEPP2, selectively expressed in the testis.
Chad M Wayne, James A MacLean, Gail Cornwall, Miles F Wilkinson. Gene 2002
45
40

The Homeobox Transcription Factor RHOX10 Drives Mouse Spermatogonial Stem Cell Establishment.
Hye-Won Song, Anilkumar Bettegowda, Blue B Lake, Adrienne H Zhao, David Skarbrevik, Eric Babajanian, Meena Sukhwani, Eleen Y Shum, Mimi H Phan, Terra-Dawn M Plank,[...]. Cell Rep 2016
29
40


A microRNA cluster in the Fragile-X region expressed during spermatogenesis targets FMR1.
Madhuvanthi Ramaiah, Kun Tan, Terra-Dawn M Plank, Hye-Won Song, Jennifer N Dumdie, Samantha Jones, Eleen Y Shum, Steven D Sheridan, Kevin J Peterson, Jörg Gromoll,[...]. EMBO Rep 2019
15
40

MIWI2 targets RNAs transcribed from piRNA-dependent regions to drive DNA methylation in mouse prospermatogonia.
Toshiaki Watanabe, Xiekui Cui, Zhongyu Yuan, Hongying Qi, Haifan Lin. EMBO J 2018
19
40



The RHOX homeobox gene cluster is selectively expressed in human oocytes and male germ cells.
H W Song, R A Anderson, R A Bayne, J Gromoll, S Shimasaki, R J Chang, M M Parast, L C Laurent, D G de Rooij, T C Hsieh,[...]. Hum Reprod 2013
23
40

The Rhox gene cluster suppresses germline LINE1 transposition.
Kun Tan, Matthew E Kim, Hye-Won Song, David Skarbrevik, Eric Babajanian, Tracy A Bedrosian, Fred H Gage, Miles F Wilkinson. Proc Natl Acad Sci U S A 2021
3
66

The Neonatal and Adult Human Testis Defined at the Single-Cell Level.
Abhishek Sohni, Kun Tan, Hye-Won Song, Dana Burow, Dirk G de Rooij, Louise Laurent, Tung-Chin Hsieh, Raja Rabah, Saher Sue Hammoud, Elena Vicini,[...]. Cell Rep 2019
90
40


Dynamic expression pattern and subcellular localization of the Rhox10 homeobox transcription factor during early germ cell development.
Hye-Won Song, Christina T Dann, John R McCarrey, Marvin L Meistrich, Gail A Cornwall, Miles F Wilkinson. Reproduction 2012
15
40

Transcriptome profiling reveals signaling conditions dictating human spermatogonia fate in vitro.
Kun Tan, Hye-Won Song, Merlin Thompson, Sarah Munyoki, Meena Sukhwani, Tung-Chin Hsieh, Kyle E Orwig, Miles F Wilkinson. Proc Natl Acad Sci U S A 2020
11
40

Rhox: a new homeobox gene cluster.
James A Maclean, Mingang A Chen, Chad M Wayne, Shirley R Bruce, Manjeet Rao, Marvin L Meistrich, Carol Macleod, Miles F Wilkinson. Cell 2005
157
40

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
40

Interaction of PABPC1 with the translation initiation complex is critical to the NMD resistance of AUG-proximal nonsense mutations.
Isabel Peixeiro, Ângela Inácio, Cristina Barbosa, Ana Luísa Silva, Stephen A Liebhaber, Luísa Romão. Nucleic Acids Res 2012
62
20

Crystal structure of the UPF2-interacting domain of nonsense-mediated mRNA decay factor UPF1.
Jan Kadlec, Delphine Guilligay, Raimond B Ravelli, Stephen Cusack. RNA 2006
58
20

Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping.
Martin Fenger-Grøn, Christy Fillman, Bodil Norrild, Jens Lykke-Andersen. Mol Cell 2005
346
20

Global analyses of UPF1 binding and function reveal expanded scope of nonsense-mediated mRNA decay.
Jessica A Hurt, Alex D Robertson, Christopher B Burge. Genome Res 2013
149
20

A lifetime of neurogenesis in the olfactory system.
Jessica H Brann, Stuart J Firestein. Front Neurosci 2014
101
20

Exome sequencing identifies UPF3B as the causative gene for a Chinese non-syndrome mental retardation pedigree.
X Xu, L Zhang, P Tong, G Xun, W Su, Z Xiong, T Zhu, Y Zheng, S Luo, Y Pan,[...]. Clin Genet 2013
25
20



Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7.
Tetsuo Ohnishi, Akio Yamashita, Isao Kashima, Thomas Schell, Kirk R Anders, Andrew Grimson, Takahisa Hachiya, Matthias W Hentze, Philip Anderson, Shigeo Ohno. Mol Cell 2003
235
20

NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity.
Hala Chamieh, Lionel Ballut, Fabien Bonneau, Hervé Le Hir. Nat Struct Mol Biol 2008
197
20

Biochemical analysis of the EJC reveals two new factors and a stable tetrameric protein core.
Thomas Ø Tange, Toshiharu Shibuya, Melissa S Jurica, Melissa J Moore. RNA 2005
148
20

Posttranscriptional control of the stem cell and neurogenic programs by the nonsense-mediated RNA decay pathway.
Chih H Lou, Ada Shao, Eleen Y Shum, Josh L Espinoza, Lulu Huang, Rachid Karam, Miles F Wilkinson. Cell Rep 2014
86
20

PTC-bearing mRNA elicits a genetic compensation response via Upf3a and COMPASS components.
Zhipeng Ma, Peipei Zhu, Hui Shi, Liwei Guo, Qinghe Zhang, Yanan Chen, Shuming Chen, Zhe Zhang, Jinrong Peng, Jun Chen. Nature 2019
174
20

Functions of hUpf3a and hUpf3b in nonsense-mediated mRNA decay and translation.
Joachim B Kunz, Gabriele Neu-Yilik, Matthias W Hentze, Andreas E Kulozik, Niels H Gehring. RNA 2006
87
20

High diagnostic yield of clinical exome sequencing in Middle Eastern patients with Mendelian disorders.
Tarunashree Yavarna, Nader Al-Dewik, Mariam Al-Mureikhi, Rehab Ali, Fatma Al-Mesaifri, Laila Mahmoud, Noora Shahbeck, Shenela Lakhani, Mariam AlMulla, Zafar Nawaz,[...]. Hum Genet 2015
114
20

Nonsense-mediated mRNA Decay and Cancer.
Maximilian W Popp, Lynne E Maquat. Curr Opin Genet Dev 2018
54
20


HIV-1 Recruits UPF1 but Excludes UPF2 to Promote Nucleocytoplasmic Export of the Genomic RNA.
Lara Ajamian, Karen Abel, Shringar Rao, Kishanda Vyboh, Francisco García-de-Gracia, Ricardo Soto-Rifo, Andreas E Kulozik, Niels H Gehring, Andrew J Mouland. Biomolecules 2015
31
20


SMG7 acts as a molecular link between mRNA surveillance and mRNA decay.
Leonie Unterholzner, Elisa Izaurralde. Mol Cell 2004
212
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.