A citation-based method for searching scientific literature

Yu-Yung Chang, Sora Hagawa, Chun-Hua Hsu. Chem Commun (Camb) 2020
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


rRNA operon copy number reflects ecological strategies of bacteria.
J A Klappenbach, J M Dunbar, T M Schmidt. Appl Environ Microbiol 2000
614
100


Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter.
Elena Ivars-Martinez, Ana-Belen Martin-Cuadrado, Giuseppe D'Auria, Alex Mira, Steve Ferriera, Justin Johnson, Robert Friedman, Francisco Rodriguez-Valera. ISME J 2008
137
100

Transcriptional Control in Marine Copiotrophic and Oligotrophic Bacteria with Streamlined Genomes.
Matthew T Cottrell, David L Kirchman. Appl Environ Microbiol 2016
24
100


Plant functional traits have globally consistent effects on competition.
Georges Kunstler, Daniel Falster, David A Coomes, Francis Hui, Robert M Kooyman, Daniel C Laughlin, Lourens Poorter, Mark Vanderwel, Ghislain Vieilledent, S Joseph Wright,[...]. Nature 2016
210
100

Growth, metabolic partitioning, and the size of microorganisms.
Christopher P Kempes, Stephanie Dutkiewicz, Michael J Follows. Proc Natl Acad Sci U S A 2012
51
100

Variability of rRNA Operon Copy Number and Growth Rate Dynamics of Bacillus Isolated from an Extremely Oligotrophic Aquatic Ecosystem.
Jorge A Valdivia-Anistro, Luis E Eguiarte-Fruns, Gabriela Delgado-Sapién, Pedro Márquez-Zacarías, Jaime Gasca-Pineda, Jennifer Learned, James J Elser, Gabriela Olmedo-Alvarez, Valeria Souza. Front Microbiol 2016
20
100

Trait-based approaches for understanding microbial biodiversity and ecosystem functioning.
Sascha Krause, Xavier Le Roux, Pascal A Niklaus, Peter M Van Bodegom, Jay T Lennon, Stefan Bertilsson, Hans-Peter Grossart, Laurent Philippot, Paul L E Bodelier. Front Microbiol 2014
170
100


Shifts in metabolic scaling, production, and efficiency across major evolutionary transitions of life.
John P DeLong, Jordan G Okie, Melanie E Moses, Richard M Sibly, James H Brown. Proc Natl Acad Sci U S A 2010
173
100

The systemic imprint of growth and its uses in ecological (meta)genomics.
Sara Vieira-Silva, Eduardo P C Rocha. PLoS Genet 2010
186
100

Implications of streamlining theory for microbial ecology.
Stephen J Giovannoni, J Cameron Thrash, Ben Temperton. ISME J 2014
350
100

A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life.
Donovan H Parks, Maria Chuvochina, David W Waite, Christian Rinke, Adam Skarshewski, Pierre-Alain Chaumeil, Philip Hugenholtz. Nat Biotechnol 2018
100


Decreases in average bacterial community rRNA operon copy number during succession.
Diana R Nemergut, Joseph E Knelman, Scott Ferrenberg, Teresa Bilinski, Brett Melbourne, Lin Jiang, Cyrille Violle, John L Darcy, Tiffany Prest, Steven K Schmidt,[...]. ISME J 2016
81
100



Revisiting life strategy concepts in environmental microbial ecology.
Adrian Ho, D Paolo Di Lonardo, Paul L E Bodelier. FEMS Microbiol Ecol 2017
173
100

Exploiting rRNA operon copy number to investigate bacterial reproductive strategies.
Benjamin R K Roller, Steven F Stoddard, Thomas M Schmidt. Nat Microbiol 2016
167
100


Isolation of an autotrophic ammonia-oxidizing marine archaeon.
Martin Könneke, Anne E Bernhard, José R de la Torre, Christopher B Walker, John B Waterbury, David A Stahl. Nature 2005
100

Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean.
Brandon K Swan, Ben Tupper, Alexander Sczyrba, Federico M Lauro, Manuel Martinez-Garcia, José M González, Haiwei Luo, Jody J Wright, Zachary C Landry, Niels W Hanson,[...]. Proc Natl Acad Sci U S A 2013
214
100

The genomic basis of trophic strategy in marine bacteria.
Federico M Lauro, Diane McDougald, Torsten Thomas, Timothy J Williams, Suhelen Egan, Scott Rice, Matthew Z DeMaere, Lily Ting, Haluk Ertan, Justin Johnson,[...]. Proc Natl Acad Sci U S A 2009
384
100

Bacterial lifestyle shapes stringent response activation.
Cara C Boutte, Sean Crosson. Trends Microbiol 2013
132
100



An extremely oligotrophic bacterium, Rhodococcus erythropolis N9T-4, isolated from crude oil.
Naoko Ohhata, Nobuyuki Yoshida, Hiroshi Egami, Tohoru Katsuragi, Yoshiki Tani, Hiroshi Takagi. J Bacteriol 2007
26
100

Trends between gene content and genome size in prokaryotic species with larger genomes.
Konstantinos T Konstantinidis, James M Tiedje. Proc Natl Acad Sci U S A 2004
292
100

Rheinheimera texasensis sp. nov., a halointolerant freshwater oligotroph.
Mubina M Merchant, Allana K Welsh, Robert J C McLean. Int J Syst Evol Microbiol 2007
35
100

Evolutionary tradeoffs in cellular composition across diverse bacteria.
Christopher P Kempes, Lawrence Wang, Jan P Amend, John Doyle, Tori Hoehler. ISME J 2016
33
100


Defining trait-based microbial strategies with consequences for soil carbon cycling under climate change.
Ashish A Malik, Jennifer B H Martiny, Eoin L Brodie, Adam C Martiny, Kathleen K Treseder, Steven D Allison. ISME J 2020
117
100

Life under extreme energy limitation: a synthesis of laboratory- and field-based investigations.
Mark A Lever, Karyn L Rogers, Karen G Lloyd, Jörg Overmann, Bernhard Schink, Rudolf K Thauer, Tori M Hoehler, Bo Barker Jørgensen. FEMS Microbiol Rev 2015
142
100

Following Rapoport's Rule: the geographic range and genome size of bacterial taxa decline at warmer latitudes.
Gavin Lear, Kelvin Lau, Anne-Marie Perchec, Hannah L Buckley, Bradley S Case, Martin Neale, Noah Fierer, Jonathan W Leff, Kim M Handley, Gillian Lewis. Environ Microbiol 2017
14
100

Sphingomonas oligophenolica sp. nov., a halo- and organo-sensitive oligotrophic bacterium from paddy soil that degrades phenolic acids at low concentrations.
Hiroyuki Ohta, Reiko Hattori, Yuuji Ushiba, Hisayuki Mitsui, Masao Ito, Hiroshi Watanabe, Akira Tonosaki, Tsutomu Hattori. Int J Syst Evol Microbiol 2004
27
100

The global spectrum of plant form and function.
Sandra Díaz, Jens Kattge, Johannes H C Cornelissen, Ian J Wright, Sandra Lavorel, Stéphane Dray, Björn Reu, Michael Kleyer, Christian Wirth, I Colin Prentice,[...]. Nature 2016
604
100


Understanding how microbiomes influence the systems they inhabit.
Ed K Hall, Emily S Bernhardt, Raven L Bier, Mark A Bradford, Claudia M Boot, James B Cotner, Paul A Del Giorgio, Sarah E Evans, Emily B Graham, Stuart E Jones,[...]. Nat Microbiol 2018
69
100

Factors driving effective population size and pan-genome evolution in bacteria.
Louis-Marie Bobay, Howard Ochman. BMC Evol Biol 2018
54
100

The bright side of microbial dark matter: lessons learned from the uncultivated majority.
Lindsey Solden, Karen Lloyd, Kelly Wrighton. Curr Opin Microbiol 2016
118
100

Metabolically versatile large-genome prokaryotes.
Benoit Guieysse, Stefan Wuertz. Curr Opin Biotechnol 2012
28
100

Big bacteria.
H N Schulz, B B Jorgensen. Annu Rev Microbiol 2001
192
100

A synthesis of bacterial and archaeal phenotypic trait data.
Joshua S Madin, Daniel A Nielsen, Maria Brbic, Ross Corkrey, David Danko, Kyle Edwards, Martin K M Engqvist, Noah Fierer, Jemma L Geoghegan, Michael Gillings,[...]. Sci Data 2020
22
100

Trait-based community assembly and succession of the infant gut microbiome.
John Guittar, Ashley Shade, Elena Litchman. Nat Commun 2019
51
100

Bacterial evolution: Genomics of metabolic trade-offs.
Martin F Polz, Otto X Cordero. Nat Microbiol 2016
28
100

Ecological strategies and metabolic trade-offs of complex environmental biofilms.
Robert Niederdorfer, Katharina Besemer, Tom J Battin, Hannes Peter. NPJ Biofilms Microbiomes 2017
20
100

Shifts in growth strategies reflect tradeoffs in cellular economics.
Douwe Molenaar, Rogier van Berlo, Dick de Ridder, Bas Teusink. Mol Syst Biol 2009
329
100

rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development.
Steven F Stoddard, Byron J Smith, Robert Hein, Benjamin R K Roller, Thomas M Schmidt. Nucleic Acids Res 2015
410
100

Ecological selection for small microbial genomes along a temperate-to-thermal soil gradient.
Jackson W Sorensen, Taylor K Dunivin, Tammy C Tobin, Ashley Shade. Nat Microbiol 2019
17
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.