A citation-based method for searching scientific literature

Natalie Telis, Robin Aguilar, Kelley Harris. Nat Ecol Evol 2020
Times Cited: 5







List of co-cited articles
53 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Evidence for archaic adaptive introgression in humans.
Fernando Racimo, Sriram Sankararaman, Rasmus Nielsen, Emilia Huerta-Sánchez. Nat Rev Genet 2015
234
80

The Genetic Cost of Neanderthal Introgression.
Kelley Harris, Rasmus Nielsen. Genetics 2016
147
80

Limits of long-term selection against Neandertal introgression.
Martin Petr, Svante Pääbo, Janet Kelso, Benjamin Vernot. Proc Natl Acad Sci U S A 2019
56
80



Functional implications of Neandertal introgression in modern humans.
Michael Dannemann, Kay Prüfer, Janet Kelso. Genome Biol 2017
43
80

A high-coverage Neandertal genome from Chagyrskaya Cave.
Fabrizio Mafessoni, Steffi Grote, Cesare de Filippo, Viviane Slon, Kseniya A Kolobova, Bence Viola, Sergey V Markin, Manjusha Chintalapati, Stephane Peyrégne, Laurits Skov,[...]. Proc Natl Acad Sci U S A 2020
43
80

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
80

A high-coverage Neandertal genome from Vindija Cave in Croatia.
Kay Prüfer, Cesare de Filippo, Steffi Grote, Fabrizio Mafessoni, Petra Korlević, Mateja Hajdinjak, Benjamin Vernot, Laurits Skov, Pinghsun Hsieh, Stéphane Peyrégne,[...]. Science 2017
201
80

The genomic landscape of Neanderthal ancestry in present-day humans.
Sriram Sankararaman, Swapan Mallick, Michael Dannemann, Kay Prüfer, Janet Kelso, Svante Pääbo, Nick Patterson, David Reich. Nature 2014
421
80

The Strength of Selection against Neanderthal Introgression.
Ivan Juric, Simon Aeschbacher, Graham Coop. PLoS Genet 2016
137
80

Signatures of Archaic Adaptive Introgression in Present-Day Human Populations.
Fernando Racimo, Davide Marnetto, Emilia Huerta-Sánchez. Mol Biol Evol 2017
78
60

VolcanoFinder: Genomic scans for adaptive introgression.
Derek Setter, Sylvain Mousset, Xiaoheng Cheng, Rasmus Nielsen, Michael DeGiorgio, Joachim Hermisson. PLoS Genet 2020
17
60

Archaic Hominin Admixture Facilitated Adaptation to Out-of-Africa Environments.
Rachel M Gittelman, Joshua G Schraiber, Benjamin Vernot, Carmen Mikacenic, Mark M Wurfel, Joshua M Akey. Curr Biol 2016
74
60

Adaptively introgressed Neandertal haplotype at the OAS locus functionally impacts innate immune responses in humans.
Aaron J Sams, Anne Dumaine, Yohann Nédélec, Vania Yotova, Carolina Alfieri, Jerome E Tanner, Philipp W Messer, Luis B Barreiro. Genome Biol 2016
56
60

Genetic Adaptation and Neandertal Admixture Shaped the Immune System of Human Populations.
Hélène Quach, Maxime Rotival, Julien Pothlichet, Yong-Hwee Eddie Loh, Michael Dannemann, Nora Zidane, Guillaume Laval, Etienne Patin, Christine Harmant, Marie Lopez,[...]. Cell 2016
178
60

Natural selection interacts with recombination to shape the evolution of hybrid genomes.
Molly Schumer, Chenling Xu, Daniel L Powell, Arun Durvasula, Laurits Skov, Chris Holland, John C Blazier, Sriram Sankararaman, Peter Andolfatto, Gil G Rosenthal,[...]. Science 2018
128
60


The complete genome sequence of a Neanderthal from the Altai Mountains.
Kay Prüfer, Fernando Racimo, Nick Patterson, Flora Jay, Sriram Sankararaman, Susanna Sawyer, Anja Heinze, Gabriel Renaud, Peter H Sudmant, Cesare de Filippo,[...]. Nature 2014
882
60

The Contribution of Neanderthals to Phenotypic Variation in Modern Humans.
Michael Dannemann, Janet Kelso. Am J Hum Genet 2017
52
60

Genomic Signatures of Selective Pressures and Introgression from Archaic Hominins at Human Innate Immunity Genes.
Matthieu Deschamps, Guillaume Laval, Maud Fagny, Yuval Itan, Laurent Abel, Jean-Laurent Casanova, Etienne Patin, Lluis Quintana-Murci. Am J Hum Genet 2016
121
40


Adaptive gene introgression after secondary contact.
Hildegard Uecker, Derek Setter, Joachim Hermisson. J Math Biol 2015
17
40


The shaping of modern human immune systems by multiregional admixture with archaic humans.
Laurent Abi-Rached, Matthew J Jobin, Subhash Kulkarni, Alasdair McWhinnie, Klara Dalva, Loren Gragert, Farbod Babrzadeh, Baback Gharizadeh, Ma Luo, Francis A Plummer,[...]. Science 2011
250
40

Adaptive introgression underlies polymorphic seasonal camouflage in snowshoe hares.
Matthew R Jones, L Scott Mills, Paulo Célio Alves, Colin M Callahan, Joel M Alves, Diana J R Lafferty, Francis M Jiggins, Jeffrey D Jensen, José Melo-Ferreira, Jeffrey M Good. Science 2018
96
40

SLiM 3: Forward Genetic Simulations Beyond the Wright-Fisher Model.
Benjamin C Haller, Philipp W Messer. Mol Biol Evol 2019
162
40

Model-based detection and analysis of introgressed Neanderthal ancestry in modern humans.
Matthias Steinrücken, Jeffrey P Spence, John A Kamm, Emilia Wieczorek, Yun S Song. Mol Ecol 2018
29
40

Efficient Coalescent Simulation and Genealogical Analysis for Large Sample Sizes.
Jerome Kelleher, Alison M Etheridge, Gilean McVean. PLoS Comput Biol 2016
178
40

Tree-sequence recording in SLiM opens new horizons for forward-time simulation of whole genomes.
Benjamin C Haller, Jared Galloway, Jerome Kelleher, Philipp W Messer, Peter L Ralph. Mol Ecol Resour 2019
36
40

On the Distribution of Tract Lengths During Adaptive Introgression.
Vladimir Shchur, Jesper Svedberg, Paloma Medina, Russell Corbett-Detig, Rasmus Nielsen. G3 (Bethesda) 2020
8
40

Population genomics of Bronze Age Eurasia.
Morten E Allentoft, Martin Sikora, Karl-Göran Sjögren, Simon Rasmussen, Morten Rasmussen, Jesper Stenderup, Peter B Damgaard, Hannes Schroeder, Torbjörn Ahlström, Lasse Vinner,[...]. Nature 2015
462
40

Adaptive introgression of herbivore resistance traits in the weedy sunflower Helianthus annuus.
Kenneth D Whitney, Rebecca A Randell, Loren H Rieseberg. Am Nat 2006
158
40

Neanderthal ancestry drives evolution of lipid catabolism in contemporary Europeans.
Ekaterina E Khrameeva, Katarzyna Bozek, Liu He, Zheng Yan, Xi Jiang, Yuning Wei, Kun Tang, Mikhail S Gelfand, Kay Prufer, Janet Kelso,[...]. Nat Commun 2014
38
40

Inferred divergent gene regulation in archaic hominins reveals potential phenotypic differences.
Laura L Colbran, Eric R Gamazon, Dan Zhou, Patrick Evans, Nancy J Cox, John A Capra. Nat Ecol Evol 2019
14
40

A high-coverage genome sequence from an archaic Denisovan individual.
Matthias Meyer, Martin Kircher, Marie-Theres Gansauge, Heng Li, Fernando Racimo, Swapan Mallick, Joshua G Schraiber, Flora Jay, Kay Prüfer, Cesare de Filippo,[...]. Science 2012
851
40


The Combined Landscape of Denisovan and Neanderthal Ancestry in Present-Day Humans.
Sriram Sankararaman, Swapan Mallick, Nick Patterson, David Reich. Curr Biol 2016
172
40

Genetic Ancestry and Natural Selection Drive Population Differences in Immune Responses to Pathogens.
Yohann Nédélec, Joaquín Sanz, Golshid Baharian, Zachary A Szpiech, Alain Pacis, Anne Dumaine, Jean-Christophe Grenier, Andrew Freiman, Aaron J Sams, Steven Hebert,[...]. Cell 2016
200
40

Analysis of Human Sequence Data Reveals Two Pulses of Archaic Denisovan Admixture.
Sharon R Browning, Brian L Browning, Ying Zhou, Serena Tucci, Joshua M Akey. Cell 2018
103
40


Neanderthal introgression reintroduced functional ancestral alleles lost in Eurasian populations.
David C Rinker, Corinne N Simonti, Evonne McArthur, Douglas Shaw, Emily Hodges, John A Capra. Nat Ecol Evol 2020
7
40


Identifying and Interpreting Apparent Neanderthal Ancestry in African Individuals.
Lu Chen, Aaron B Wolf, Wenqing Fu, Liming Li, Joshua M Akey. Cell 2020
48
40

The phenotypic legacy of admixture between modern humans and Neandertals.
Corinne N Simonti, Benjamin Vernot, Lisa Bastarache, Erwin Bottinger, David S Carrell, Rex L Chisholm, David R Crosslin, Scott J Hebbring, Gail P Jarvik, Iftikhar J Kullo,[...]. Science 2016
121
40


Genetic history of an archaic hominin group from Denisova Cave in Siberia.
David Reich, Richard E Green, Martin Kircher, Johannes Krause, Nick Patterson, Eric Y Durand, Bence Viola, Adrian W Briggs, Udo Stenzel, Philip L F Johnson,[...]. Nature 2010
688
40

UK biobank: an open access resource for identifying the causes of a wide range of complex diseases of middle and old age.
Cathie Sudlow, John Gallacher, Naomi Allen, Valerie Beral, Paul Burton, John Danesh, Paul Downey, Paul Elliott, Jane Green, Martin Landray,[...]. PLoS Med 2015
40


Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA.
Emilia Huerta-Sánchez, Xin Jin, Asan, Zhuoma Bianba, Benjamin M Peter, Nicolas Vinckenbosch, Yu Liang, Xin Yi, Mingze He, Mehmet Somel,[...]. Nature 2014
427
40


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.