A citation-based method for searching scientific literature

Maturada Patchsung, Krittapas Jantarug, Archiraya Pattama, Kanokpol Aphicho, Surased Suraritdechachai, Piyachat Meesawat, Khomkrit Sappakhaw, Nattawat Leelahakorn, Theerawat Ruenkam, Thanakrit Wongsatit, Niracha Athipanyasilp, Bhumrapee Eiamthong, Benya Lakkanasirorat, Thitima Phoodokmai, Nootaree Niljianskul, Danaya Pakotiprapha, Sittinan Chanarat, Aimorn Homchan, Ruchanok Tinikul, Philaiwarong Kamutira, Kochakorn Phiwkaow, Sahachat Soithongcharoen, Chadaporn Kantiwiriyawanitch, Vinutsada Pongsupasa, Duangthip Trisrivirat, Juthamas Jaroensuk, Thanyaporn Wongnate, Somchart Maenpuen, Pimchai Chaiyen, Sirichai Kamnerdnakta, Jirawat Swangsri, Suebwong Chuthapisith, Yongyut Sirivatanauksorn, Chutikarn Chaimayo, Ruengpung Sutthent, Wannee Kantakamalakul, Julia Joung, Alim Ladha, Xin Jin, Jonathan S Gootenberg, Omar O Abudayyeh, Feng Zhang, Navin Horthongkham, Chayasith Uttamapinant. Nat Biomed Eng 2020
Times Cited: 224







List of co-cited articles
1128 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


CRISPR-Cas12-based detection of SARS-CoV-2.
James P Broughton, Xianding Deng, Guixia Yu, Clare L Fasching, Venice Servellita, Jasmeet Singh, Xin Miao, Jessica A Streithorst, Andrea Granados, Alicia Sotomayor-Gonzalez,[...]. Nat Biotechnol 2020
77

Nucleic acid detection with CRISPR-Cas13a/C2c2.
Jonathan S Gootenberg, Omar O Abudayyeh, Jeong Wook Lee, Patrick Essletzbichler, Aaron J Dy, Julia Joung, Vanessa Verdine, Nina Donghia, Nichole M Daringer, Catherine A Freije,[...]. Science 2017
54

CRISPR-Cas12a target binding unleashes indiscriminate single-stranded DNase activity.
Janice S Chen, Enbo Ma, Lucas B Harrington, Maria Da Costa, Xinran Tian, Joel M Palefsky, Jennifer A Doudna. Science 2018
51

Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6.
Jonathan S Gootenberg, Omar O Abudayyeh, Max J Kellner, Julia Joung, James J Collins, Feng Zhang. Science 2018
868
46

Field-deployable viral diagnostics using CRISPR-Cas13.
Cameron Myhrvold, Catherine A Freije, Jonathan S Gootenberg, Omar O Abudayyeh, Hayden C Metsky, Ann F Durbin, Max J Kellner, Amanda L Tan, Lauren M Paul, Leda A Parham,[...]. Science 2018
558
42

Streamlined inactivation, amplification, and Cas13-based detection of SARS-CoV-2.
Jon Arizti-Sanz, Catherine A Freije, Alexandra C Stanton, Brittany A Petros, Chloe K Boehm, Sameed Siddiqui, Bennett M Shaw, Gordon Adams, Tinna-Solveig F Kosoko-Thoroddsen, Molly E Kemball,[...]. Nat Commun 2020
149
41

Amplification-free detection of SARS-CoV-2 with CRISPR-Cas13a and mobile phone microscopy.
Parinaz Fozouni, Sungmin Son, María Díaz de León Derby, Gavin J Knott, Carley N Gray, Michael V D'Ambrosio, Chunyu Zhao, Neil A Switz, G Renuka Kumar, Stephanie I Stephens,[...]. Cell 2021
274
41

Ultrasensitive and visual detection of SARS-CoV-2 using all-in-one dual CRISPR-Cas12a assay.
Xiong Ding, Kun Yin, Ziyue Li, Rajesh V Lalla, Enrique Ballesteros, Maroun M Sfeir, Changchun Liu. Nat Commun 2020
249
38

Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing.
Julia Joung, Alim Ladha, Makoto Saito, Nam-Gyun Kim, Ann E Woolley, Michael Segel, Robert P J Barretto, Amardeep Ranu, Rhiannon K Macrae, Guilhem Faure,[...]. N Engl J Med 2020
277
36

Massively multiplexed nucleic acid detection with Cas13.
Cheri M Ackerman, Cameron Myhrvold, Sri Gowtham Thakku, Catherine A Freije, Hayden C Metsky, David K Yang, Simon H Ye, Chloe K Boehm, Tinna-Sólveig F Kosoko-Thoroddsen, Jared Kehe,[...]. Nature 2020
227
32

C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector.
Omar O Abudayyeh, Jonathan S Gootenberg, Silvana Konermann, Julia Joung, Ian M Slaymaker, David B T Cox, Sergey Shmakov, Kira S Makarova, Ekaterina Semenova, Leonid Minakhin,[...]. Science 2016
980
28

SHERLOCK: nucleic acid detection with CRISPR nucleases.
Max J Kellner, Jeremy G Koob, Jonathan S Gootenberg, Omar O Abudayyeh, Feng Zhang. Nat Protoc 2019
416
26

CRISPR/Cas Systems towards Next-Generation Biosensing.
Yi Li, Shiyuan Li, Jin Wang, Guozhen Liu. Trends Biotechnol 2019
313
22

CRISPR-Cas12a-assisted nucleic acid detection.
Shi-Yuan Li, Qiu-Xiang Cheng, Jing-Man Wang, Xiao-Yan Li, Zi-Long Zhang, Song Gao, Rui-Bing Cao, Guo-Ping Zhao, Jin Wang. Cell Discov 2018
380
21

RNA targeting with CRISPR-Cas13.
Omar O Abudayyeh, Jonathan S Gootenberg, Patrick Essletzbichler, Shuo Han, Julia Joung, Joseph J Belanto, Vanessa Verdine, David B T Cox, Max J Kellner, Aviv Regev,[...]. Nature 2017
850
20

Loop-mediated isothermal amplification of DNA.
T Notomi, H Okayama, H Masubuchi, T Yonekawa, K Watanabe, N Amino, T Hase. Nucleic Acids Res 2000
19

Ultra-sensitive and high-throughput CRISPR-p owered COVID-19 diagnosis.
Zhen Huang, Di Tian, Yang Liu, Zhen Lin, Christopher J Lyon, Weihua Lai, Dahlene Fusco, Arnaud Drouin, Xiaoming Yin, Tony Hu,[...]. Biosens Bioelectron 2020
189
19

Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR.
Victor M Corman, Olfert Landt, Marco Kaiser, Richard Molenkamp, Adam Meijer, Daniel Kw Chu, Tobias Bleicker, Sebastian Brünink, Julia Schneider, Marie Luisa Schmidt,[...]. Euro Surveill 2020
19

iSCAN: An RT-LAMP-coupled CRISPR-Cas12 module for rapid, sensitive detection of SARS-CoV-2.
Zahir Ali, Rashid Aman, Ahmed Mahas, Gundra Sivakrishna Rao, Muhammad Tehseen, Tin Marsic, Rahul Salunke, Amit K Subudhi, Sharif M Hala, Samir M Hamdan,[...]. Virus Res 2020
123
19

Programmed DNA destruction by miniature CRISPR-Cas14 enzymes.
Lucas B Harrington, David Burstein, Janice S Chen, David Paez-Espino, Enbo Ma, Isaac P Witte, Joshua C Cofsky, Nikos C Kyrpides, Jillian F Banfield, Jennifer A Doudna. Science 2018
383
18

Two distinct RNase activities of CRISPR-C2c2 enable guide-RNA processing and RNA detection.
Alexandra East-Seletsky, Mitchell R O'Connell, Spencer C Knight, David Burstein, Jamie H D Cate, Robert Tjian, Jennifer A Doudna. Nature 2016
493
18

Electric field-driven microfluidics for rapid CRISPR-based diagnostics and its application to detection of SARS-CoV-2.
Ashwin Ramachandran, Diego A Huyke, Eesha Sharma, Malaya K Sahoo, ChunHong Huang, Niaz Banaei, Benjamin A Pinsky, Juan G Santiago. Proc Natl Acad Sci U S A 2020
118
18

A smartphone-read ultrasensitive and quantitative saliva test for COVID-19.
Bo Ning, Tao Yu, Shengwei Zhang, Zhen Huang, Di Tian, Zhen Lin, Alex Niu, Nadia Golden, Krystle Hensley, Breanna Threeton,[...]. Sci Adv 2021
84
21

CRISPR-based diagnostics.
Michael M Kaminski, Omar O Abudayyeh, Jonathan S Gootenberg, Feng Zhang, James J Collins. Nat Biomed Eng 2021
120
18

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
17

DNA detection using recombination proteins.
Olaf Piepenburg, Colin H Williams, Derek L Stemple, Niall A Armes. PLoS Biol 2006
17

A Novel Coronavirus from Patients with Pneumonia in China, 2019.
Na Zhu, Dingyu Zhang, Wenling Wang, Xingwang Li, Bo Yang, Jingdong Song, Xiang Zhao, Baoying Huang, Weifeng Shi, Roujian Lu,[...]. N Engl J Med 2020
16

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
16

Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems.
Sergey Shmakov, Omar O Abudayyeh, Kira S Makarova, Yuri I Wolf, Jonathan S Gootenberg, Ekaterina Semenova, Leonid Minakhin, Julia Joung, Silvana Konermann, Konstantin Severinov,[...]. Mol Cell 2015
613
15

Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants.
Kira S Makarova, Yuri I Wolf, Jaime Iranzo, Sergey A Shmakov, Omer S Alkhnbashi, Stan J J Brouns, Emmanuelle Charpentier, David Cheng, Daniel H Haft, Philippe Horvath,[...]. Nat Rev Microbiol 2020
636
15

A Scalable, Easy-to-Deploy Protocol for Cas13-Based Detection of SARS-CoV-2 Genetic Material.
Jennifer N Rauch, Eric Valois, Sabrina C Solley, Friederike Braig, Ryan S Lach, Morgane Audouard, Jose Carlos Ponce-Rojas, Michael S Costello, Naomi J Baxter, Kenneth S Kosik,[...]. J Clin Microbiol 2021
59
25

SARS-CoV-2 detection with CRISPR diagnostics.
Lu Guo, Xuehan Sun, Xinge Wang, Chen Liang, Haiping Jiang, Qingqin Gao, Moyu Dai, Bin Qu, Sen Fang, Yihuan Mao,[...]. Cell Discov 2020
110
15

opvCRISPR: One-pot visual RT-LAMP-CRISPR platform for SARS-cov-2 detection.
Rui Wang, Chunyan Qian, Yanan Pang, Miaomiao Li, Yu Yang, Haijing Ma, Manying Zhao, Feng Qian, Hang Yu, Zhenping Liu,[...]. Biosens Bioelectron 2021
100
15

Contamination-free visual detection of SARS-CoV-2 with CRISPR/Cas12a: A promising method in the point-of-care detection.
Yanju Chen, Ya Shi, Yin Chen, Zhangnv Yang, Hui Wu, Zhihui Zhou, Jue Li, Jianfeng Ping, Luping He, Hong Shen,[...]. Biosens Bioelectron 2020
69
21

Minimally instrumented SHERLOCK (miSHERLOCK) for CRISPR-based point-of-care diagnosis of SARS-CoV-2 and emerging variants.
Helena de Puig, Rose A Lee, Devora Najjar, Xiao Tan, Luis R Soeknsen, Nicolaas M Angenent-Mari, Nina M Donghia, Nicole E Weckman, Audrey Ory, Carlos F Ng,[...]. Sci Adv 2021
83
18

Deployable CRISPR-Cas13a diagnostic tools to detect and report Ebola and Lassa virus cases in real-time.
Kayla G Barnes, Anna E Lachenauer, Adam Nitido, Sameed Siddiqui, Robin Gross, Brett Beitzel, Katherine J Siddle, Catherine A Freije, Bonnie Dighero-Kemp, Samar B Mehta,[...]. Nat Commun 2020
51
27

Programmable Inhibition and Detection of RNA Viruses Using Cas13.
Catherine A Freije, Cameron Myhrvold, Chloe K Boehm, Aaron E Lin, Nicole L Welch, Amber Carter, Hayden C Metsky, Cynthia Y Luo, Omar O Abudayyeh, Jonathan S Gootenberg,[...]. Mol Cell 2019
180
14


Rapid, Low-Cost Detection of Zika Virus Using Programmable Biomolecular Components.
Keith Pardee, Alexander A Green, Melissa K Takahashi, Dana Braff, Guillaume Lambert, Jeong Wook Lee, Tom Ferrante, Duo Ma, Nina Donghia, Melina Fan,[...]. Cell 2016
602
14

Development and evaluation of a rapid CRISPR-based diagnostic for COVID-19.
Tieying Hou, Weiqi Zeng, Minling Yang, Wenjing Chen, Lili Ren, Jingwen Ai, Ji Wu, Yalong Liao, Xuejing Gou, Yongjun Li,[...]. PLoS Pathog 2020
105
14

HOLMESv2: A CRISPR-Cas12b-Assisted Platform for Nucleic Acid Detection and DNA Methylation Quantitation.
Linxian Li, Shiyuan Li, Na Wu, Jiacheng Wu, Gang Wang, Guoping Zhao, Jin Wang. ACS Synth Biol 2019
189
14

Point-of-care testing for COVID-19 using SHERLOCK diagnostics.
Julia Joung, Alim Ladha, Makoto Saito, Michael Segel, Robert Bruneau, Meei-Li W Huang, Nam-Gyun Kim, Xu Yu, Jonathan Li, Bruce D Walker,[...]. medRxiv 2020
152
13

Rapid and Fully Microfluidic Ebola Virus Detection with CRISPR-Cas13a.
Peiwu Qin, Myeongkee Park, Kendra J Alfson, Manasi Tamhankar, Ricardo Carrion, Jean L Patterson, Anthony Griffiths, Qian He, Ahmet Yildiz, Richard Mathies,[...]. ACS Sens 2019
108
13

Rapid electrochemical detection of coronavirus SARS-CoV-2.
Thanyarat Chaibun, Jiratchaya Puenpa, Tatchanun Ngamdee, Nimaradee Boonapatcharoen, Pornpat Athamanolap, Anthony Peter O'Mullane, Sompong Vongpunsawad, Yong Poovorawan, Su Yin Lee, Benchaporn Lertanantawong. Nat Commun 2021
122
13

An engineered CRISPR-Cas12a variant and DNA-RNA hybrid guides enable robust and rapid COVID-19 testing.
Kean Hean Ooi, Mengying Mandy Liu, Jie Wen Douglas Tay, Seok Yee Teo, Pornchai Kaewsapsak, Shengyang Jin, Chun Kiat Lee, Jingwen Hou, Sebastian Maurer-Stroh, Weisi Lin,[...]. Nat Commun 2021
50
26

Digital CRISPR/Cas-Assisted Assay for Rapid and Sensitive Detection of SARS-CoV-2.
Joon Soo Park, Kuangwen Hsieh, Liben Chen, Aniruddha Kaushik, Alexander Y Trick, Tza-Huei Wang. Adv Sci (Weinh) 2021
51
25

CRISPR-Cas12a has both cis- and trans-cleavage activities on single-stranded DNA.
Shi-Yuan Li, Qiu-Xiang Cheng, Jia-Kun Liu, Xiao-Qun Nie, Guo-Ping Zhao, Jin Wang. Cell Res 2018
307
13

Rapid and sensitive detection of COVID-19 using CRISPR/Cas12a-based detection with naked eye readout, CRISPR/Cas12a-NER.
Xinjie Wang, Mingtian Zhong, Yong Liu, Peixiang Ma, Lu Dang, Qingzhou Meng, Wenwei Wan, Xiaodong Ma, Jia Liu, Guang Yang,[...]. Sci Bull (Beijing) 2020
96
13

Accelerated RNA detection using tandem CRISPR nucleases.
Tina Y Liu, Gavin J Knott, Dylan C J Smock, John J Desmarais, Sungmin Son, Abdul Bhuiya, Shrutee Jakhanwal, Noam Prywes, Shreeya Agrawal, María Díaz de León Derby,[...]. Nat Chem Biol 2021
49
26



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.