A citation-based method for searching scientific literature

Sarah Fazal, Matt C Danzi, Vivian P Cintra, Dana M Bis-Brewer, Egor Dolzhenko, Michael A Eberle, Stephan Zuchner. Sci Data 2020
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Cellular MYCro economics: Balancing MYC function with MYC expression.
David Levens. Cold Spring Harb Perspect Med 2013
36
100

Assembling nuclear domains: Lessons from DNA repair.
Benjamin Schrank, Jean Gautier. J Cell Biol 2019
16
100

Sequence-based estimation of minisatellite and microsatellite repeat variability.
Matthieu Legendre, Nathalie Pochet, Theodore Pak, Kevin J Verstrepen. Genome Res 2007
136
100


Membraneless organelles can melt nucleic acid duplexes and act as biomolecular filters.
Timothy J Nott, Timothy D Craggs, Andrew J Baldwin. Nat Chem 2016
170
100

BRG1 interacts with Nrf2 to selectively mediate HO-1 induction in response to oxidative stress.
Jianyong Zhang, Tsutomu Ohta, Atsushi Maruyama, Tomonori Hosoya, Keizo Nishikawa, Jonathan M Maher, Shigeki Shibahara, Ken Itoh, Masayuki Yamamoto. Mol Cell Biol 2006
141
100

Structure of nucleophosmin DNA-binding domain and analysis of its complex with a G-quadruplex sequence from the c-MYC promoter.
Angelo Gallo, Carlo Lo Sterzo, Mirko Mori, Adele Di Matteo, Ivano Bertini, Lucia Banci, Maurizio Brunori, Luca Federici. J Biol Chem 2012
40
100

Permanganate/S1 Nuclease Footprinting Reveals Non-B DNA Structures with Regulatory Potential across a Mammalian Genome.
Fedor Kouzine, Damian Wojtowicz, Laura Baranello, Arito Yamane, Steevenson Nelson, Wolfgang Resch, Kyong-Rim Kieffer-Kwon, Craig J Benham, Rafael Casellas, Teresa M Przytycka,[...]. Cell Syst 2017
76
100

Influenza Virus Z-RNAs Induce ZBP1-Mediated Necroptosis.
Ting Zhang, Chaoran Yin, David F Boyd, Giovanni Quarato, Justin P Ingram, Maria Shubina, Katherine B Ragan, Takumi Ishizuka, Jeremy Chase Crawford, Bart Tummers,[...]. Cell 2020
77
100

Plastic roles of phenylalanine and tyrosine residues of TLS/FUS in complex formation with the G-quadruplexes of telomeric DNA and TERRA.
Keiko Kondo, Tsukasa Mashima, Takanori Oyoshi, Ryota Yagi, Riki Kurokawa, Naohiro Kobayashi, Takashi Nagata, Masato Katahira. Sci Rep 2018
17
100


Spermatogonial stem cells and spermatogenesis in mice, monkeys and men.
Adetunji P Fayomi, Kyle E Orwig. Stem Cell Res 2018
94
100

Finding and extending ancient simple sequence repeat-derived regions in the human genome.
Jonathan A Shortt, Robert P Ruggiero, Corey Cox, Aaron C Wacholder, David D Pollock. Mob DNA 2020
5
100

On the wrong DNA track: Molecular mechanisms of repeat-mediated genome instability.
Alexandra N Khristich, Sergei M Mirkin. J Biol Chem 2020
41
100

Age-dependent accumulation of recombinant cells in the mouse pancreas revealed by in situ fluorescence imaging.
Dominika M Wiktor-Brown, Carrie A Hendricks, Werner Olipitz, Bevin P Engelward. Proc Natl Acad Sci U S A 2006
31
100

The emergence of sequence-dependent structural motifs in stretched, torsionally constrained DNA.
Jack W Shepherd, Robert J Greenall, Matt I J Probert, Agnes Noy, Mark C Leake. Nucleic Acids Res 2020
8
100


RNA editing at a limited number of sites is sufficient to prevent MDA5 activation in the mouse brain.
Jung In Kim, Taisuke Nakahama, Ryuichiro Yamasaki, Pedro Henrique Costa Cruz, Tuangtong Vongpipatana, Maal Inoue, Nao Kanou, Yanfang Xing, Hiroyuki Todo, Toshiharu Shibuya,[...]. PLoS Genet 2021
5
100

Solving the missing heritability problem.
Alexander I Young. PLoS Genet 2019
59
100

Distinct DNA repair pathways cause genomic instability at alternative DNA structures.
Jennifer A McKinney, Guliang Wang, Anirban Mukherjee, Laura Christensen, Sai H Sankara Subramanian, Junhua Zhao, Karen M Vasquez. Nat Commun 2020
15
100


Chance favors the prepared genome.
L H Caporale. Ann N Y Acad Sci 1999
24
100


Detection of genomic G-quadruplexes in living cells using a small artificial protein.
Ke-Wei Zheng, Jia-Yu Zhang, Yi-de He, Jia-Yuan Gong, Cui-Jiao Wen, Juan-Nan Chen, Yu-Hua Hao, Yong Zhao, Zheng Tan. Nucleic Acids Res 2020
18
100


Nuclear compartmentalization as a mechanism of quantitative control of gene expression.
Prashant Bhat, Drew Honson, Mitchell Guttman. Nat Rev Mol Cell Biol 2021
6
100

Alu element-containing RNAs maintain nucleolar structure and function.
Maïwen Caudron-Herger, Teresa Pankert, Jeanette Seiler, Attila Németh, Renate Voit, Ingrid Grummt, Karsten Rippe. EMBO J 2015
79
100

Cooperative activity of BRG1 and Z-DNA formation in chromatin remodeling.
Hong Liu, Niveen Mulholland, Haiqing Fu, Keji Zhao. Mol Cell Biol 2006
70
100



A left-handed RNA double helix bound by the Z alpha domain of the RNA-editing enzyme ADAR1.
Diana Placido, Bernard A Brown, Ky Lowenhaupt, Alexander Rich, Alekos Athanasiadis. Structure 2007
86
100

Enrichment of Zα domains at cytoplasmic stress granules is due to their innate ability to bind to nucleic acids.
Luisa Gabriel, Bharath Srinivasan, Krzysztof Kuś, João F Mata, Maria João Amorim, Lars E T Jansen, Alekos Athanasiadis. J Cell Sci 2021
1
100

B-Z transition of poly(dG-m5dC) induced by binding of Lys-containing peptides.
H Takeuchi, N Hanamura, H Hayasaka, I Harada. FEBS Lett 1991
18
100

Anti-sense DNA d(GGCCCC)n expansions in C9ORF72 form i-motifs and protonated hairpins.
Anja Kovanda, Matja Zalar, Primož Šket, Janez Plavec, Boris Rogelj. Sci Rep 2015
46
100

Profusion of G-quadruplexes on both subunits of metazoan ribosomes.
Santi Mestre-Fos, Petar I Penev, John Colin Richards, William L Dean, Robert D Gray, Jonathan B Chaires, Loren Dean Williams. PLoS One 2019
8
100

G-Quadruplexes as pathogenic drivers in neurodegenerative disorders.
Ernest Wang, Ravi Thombre, Yajas Shah, Rachel Latanich, Jiou Wang. Nucleic Acids Res 2021
6
100

Intrinsically Disordered Regions Direct Transcription Factor In Vivo Binding Specificity.
Sagie Brodsky, Tamar Jana, Karin Mittelman, Michal Chapal, Divya Krishna Kumar, Miri Carmi, Naama Barkai. Mol Cell 2020
35
100

Crystal structure of the Zalpha domain of the human editing enzyme ADAR1 bound to left-handed Z-DNA.
T Schwartz, M A Rould, K Lowenhaupt, A Herbert, A Rich. Science 1999
244
100

Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Michael C Chen, Ramreddy Tippana, Natalia A Demeshkina, Pierre Murat, Shankar Balasubramanian, Sua Myong, Adrian R Ferré-D'Amaré. Nature 2018
111
100


Who's In and Who's Out-Compositional Control of Biomolecular Condensates.
Jonathon A Ditlev, Lindsay B Case, Michael K Rosen. J Mol Biol 2018
107
100

USP7 negatively controls global DNA methylation by attenuating ubiquitinated histone-dependent DNMT1 recruitment.
Jialun Li, Ruiping Wang, Jianyu Jin, Mengmeng Han, Zhaosu Chen, Yingying Gao, Xueli Hu, Haijun Zhu, Huifang Gao, Kongbin Lu,[...]. Cell Discov 2020
9
100

Ribosomal DNA and the nucleolus in the context of genome organization.
Tamara A Potapova, Jennifer L Gerton. Chromosome Res 2019
21
100

Small RNAs in spermatogenesis.
Ram Prakash Yadav, Noora Kotaja. Mol Cell Endocrinol 2014
81
100

The C9ORF72 GGGGCC expansion forms RNA G-quadruplex inclusions and sequesters hnRNP H to disrupt splicing in ALS brains.
Erin G Conlon, Lei Lu, Aarti Sharma, Takashi Yamazaki, Timothy Tang, Neil A Shneider, James L Manley. Elife 2016
140
100

Whole genome experimental maps of DNA G-quadruplexes in multiple species.
Giovanni Marsico, Vicki S Chambers, Aleksandr B Sahakyan, Patrick McCauley, Jonathan M Boutell, Marco Di Antonio, Shankar Balasubramanian. Nucleic Acids Res 2019
107
100

DNA G-quadruplex structures mold the DNA methylome.
Shi-Qing Mao, Avazeh T Ghanbarian, Jochen Spiegel, Sergio Martínez Cuesta, Dario Beraldi, Marco Di Antonio, Giovanni Marsico, Robert Hänsel-Hertsch, David Tannahill, Shankar Balasubramanian. Nat Struct Mol Biol 2018
77
100

Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation.
P Christoph Champ, Sandor Maurice, Jeffrey M Vargason, Tracy Camp, P Shing Ho. Nucleic Acids Res 2004
48
100




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.