A citation-based method for searching scientific literature

Hongjie Li. Wiley Interdiscip Rev Dev Biol 2021
Times Cited: 8







List of co-cited articles
72 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain.
Kristofer Davie, Jasper Janssens, Duygu Koldere, Maxime De Waegeneer, Uli Pech, Łukasz Kreft, Sara Aibar, Samira Makhzami, Valerie Christiaens, Carmen Bravo González-Blas,[...]. Cell 2018
230
50

Single cell transcriptome atlas of the Drosophila larval brain.
Clarisse Brunet Avalos, G Larisa Maier, Rémy Bruggmann, Simon G Sprecher. Elife 2019
36
50

Massively parallel digital transcriptional profiling of single cells.
Grace X Y Zheng, Jessica M Terry, Phillip Belgrader, Paul Ryvkin, Zachary W Bent, Ryan Wilson, Solongo B Ziraldo, Tobias D Wheeler, Geoff P McDermott, Junjie Zhu,[...]. Nat Commun 2017
37

Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila.
Colleen N McLaughlin, Maria Brbić, Qijing Xie, Tongchao Li, Felix Horns, Sai Saroja Kolluru, Justus M Kebschull, David Vacek, Anthony Xie, Jiefu Li,[...]. Elife 2021
8
37

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
37

Developmental origin of wiring specificity in the olfactory system of Drosophila.
Gregory S X E Jefferis, Raj M Vyas, Daniela Berdnik, Ariane Ramaekers, Reinhard F Stocker, Nobuaki K Tanaka, Kei Ito, Liqun Luo. Development 2004
166
37

Refined spatial manipulation of neuronal function by combinatorial restriction of transgene expression.
Haojiang Luan, Nathan C Peabody, Charles R Vinson, Benjamin H White. Neuron 2006
246
37

Single-Cell Transcriptomes Reveal Diverse Regulatory Strategies for Olfactory Receptor Expression and Axon Targeting.
Hongjie Li, Tongchao Li, Felix Horns, Jiefu Li, Qijing Xie, Chuanyun Xu, Bing Wu, Justus M Kebschull, Colleen N McLaughlin, Sai Saroja Kolluru,[...]. Curr Biol 2020
11
37

Classifying Drosophila Olfactory Projection Neuron Subtypes by Single-Cell RNA Sequencing.
Hongjie Li, Felix Horns, Bing Wu, Qijing Xie, Jiefu Li, Tongchao Li, David J Luginbuhl, Stephen R Quake, Liqun Luo. Cell 2017
110
37

FlyMine: an integrated database for Drosophila and Anopheles genomics.
Rachel Lyne, Richard Smith, Kim Rutherford, Matthew Wakeling, Andrew Varley, Francois Guillier, Hilde Janssens, Wenyan Ji, Peter Mclaren, Philip North,[...]. Genome Biol 2007
233
37

Cellular diversity in the Drosophila midbrain revealed by single-cell transcriptomics.
Vincent Croset, Christoph D Treiber, Scott Waddell. Elife 2018
106
37

A single-cell transcriptomic atlas of the adult Drosophila ventral nerve cord.
Aaron M Allen, Megan C Neville, Sebastian Birtles, Vincent Croset, Christoph Daniel Treiber, Scott Waddell, Stephen F Goodwin. Elife 2020
24
37

A cell atlas of adult muscle precursors uncovers early events in fibre-type divergence in Drosophila.
Maria Paula Zappia, Lucia de Castro, Majd M Ariss, Holly Jefferson, Abul Bmmk Islam, Maxim V Frolov. EMBO Rep 2020
6
50

Gene expression atlas of a developing tissue by single cell expression correlation analysis.
Josephine Bageritz, Philipp Willnow, Erica Valentini, Svenja Leible, Michael Boutros, Aurelio A Teleman. Nat Methods 2019
15
37

Single-cell RNA sequencing to explore immune cell heterogeneity.
Efthymia Papalexi, Rahul Satija. Nat Rev Immunol 2018
397
25

Transcriptional Programs of Circuit Assembly in the Drosophila Visual System.
Yerbol Z Kurmangaliyev, Juyoun Yoo, Javier Valdes-Aleman, Piero Sanfilippo, S Lawrence Zipursky. Neuron 2020
13
25

Teneurins instruct synaptic partner matching in an olfactory map.
Weizhe Hong, Timothy J Mosca, Liqun Luo. Nature 2012
143
25

A gene-specific T2A-GAL4 library for Drosophila.
Pei-Tseng Lee, Jonathan Zirin, Oguz Kanca, Wen-Wen Lin, Karen L Schulze, David Li-Kroeger, Rong Tao, Colby Devereaux, Yanhui Hu, Verena Chung,[...]. Elife 2018
63
25

SCANPY: large-scale single-cell gene expression data analysis.
F Alexander Wolf, Philipp Angerer, Fabian J Theis. Genome Biol 2018
812
25

The Q system: a repressible binary system for transgene expression, lineage tracing, and mosaic analysis.
Christopher J Potter, Bosiljka Tasic, Emilie V Russler, Liang Liang, Liqun Luo. Cell 2010
304
25

MARS: discovering novel cell types across heterogeneous single-cell experiments.
Maria Brbić, Marinka Zitnik, Sheng Wang, Angela O Pisco, Russ B Altman, Spyros Darmanis, Jure Leskovec. Nat Methods 2020
21
25

HTSeq--a Python framework to work with high-throughput sequencing data.
Simon Anders, Paul Theodor Pyl, Wolfgang Huber. Bioinformatics 2015
25


Neuroblast ablation in Drosophila P[GAL4] lines reveals origins of olfactory interneurons.
R F Stocker, G Heimbeck, N Gendre, J S de Belle. J Neurobiol 1997
260
25

Identifying loci required for follicular patterning using directed mosaics.
J B Duffy, D A Harrison, N Perrimon. Development 1998
161
25

A screen of cell-surface molecules identifies leucine-rich repeat proteins as key mediators of synaptic target selection.
Mitsuhiko Kurusu, Amy Cording, Misako Taniguchi, Kaushiki Menon, Emiko Suzuki, Kai Zinn. Neuron 2008
91
25


Dimensionality reduction for visualizing single-cell data using UMAP.
Etienne Becht, Leland McInnes, John Healy, Charles-Antoine Dutertre, Immanuel W H Kwok, Lai Guan Ng, Florent Ginhoux, Evan W Newell. Nat Biotechnol 2018
918
25

Neuronal diversity and convergence in a visual system developmental atlas.
Mehmet Neset Özel, Félix Simon, Shadi Jafari, Isabel Holguera, Yen-Chung Chen, Najate Benhra, Rana Naja El-Danaf, Katarina Kapuralin, Jennifer Amy Malin, Nikolaos Konstantinides,[...]. Nature 2021
18
25

Induction of Drosophila eye development by decapentaplegic.
F Pignoni, S L Zipursky. Development 1997
442
25

Molecular architecture of smell and taste in Drosophila.
Leslie B Vosshall, Reinhard F Stocker. Annu Rev Neurosci 2007
543
25

Mechanisms and molecules of neuronal wiring: a primer.
Alex L Kolodkin, Marc Tessier-Lavigne. Cold Spring Harb Perspect Biol 2011
372
25

FlyTF: improved annotation and enhanced functionality of the Drosophila transcription factor database.
Ulrike Pfreundt, Daniel P James, Susan Tweedie, Derek Wilson, Sarah A Teichmann, Boris Adryan. Nucleic Acids Res 2010
52
25

Fast, sensitive and accurate integration of single-cell data with Harmony.
Ilya Korsunsky, Nghia Millard, Jean Fan, Kamil Slowikowski, Fan Zhang, Kevin Wei, Yuriy Baglaenko, Michael Brenner, Po-Ru Loh, Soumya Raychaudhuri. Nat Methods 2019
454
25

Spatial reconstruction of single-cell gene expression data.
Rahul Satija, Jeffrey A Farrell, David Gennert, Alexander F Schier, Aviv Regev. Nat Biotechnol 2015
25

Genetic Reagents for Making Split-GAL4 Lines in Drosophila.
Heather Dionne, Karen L Hibbard, Amanda Cavallaro, Jui-Chun Kao, Gerald M Rubin. Genetics 2018
55
25

Full-length RNA-seq from single cells using Smart-seq2.
Simone Picelli, Omid R Faridani, Asa K Björklund, Gösta Winberg, Sven Sagasser, Rickard Sandberg. Nat Protoc 2014
25

A GAL4-driver line resource for Drosophila neurobiology.
Arnim Jenett, Gerald M Rubin, Teri-T B Ngo, David Shepherd, Christine Murphy, Heather Dionne, Barret D Pfeiffer, Amanda Cavallaro, Donald Hall, Jennifer Jeter,[...]. Cell Rep 2012
711
25

Integrating the molecular and cellular basis of odor coding in the Drosophila antenna.
Anna A Dobritsa, Wynand van der Goes van Naters, Coral G Warr, R Alexander Steinbrecht, John R Carlson. Neuron 2003
346
25

Single-nucleus and single-cell transcriptomes compared in matched cortical cell types.
Trygve E Bakken, Rebecca D Hodge, Jeremy A Miller, Zizhen Yao, Thuc Nghi Nguyen, Brian Aevermann, Eliza Barkan, Darren Bertagnolli, Tamara Casper, Nick Dee,[...]. PLoS One 2018
128
25

Cryo-EM structure of the insect olfactory receptor Orco.
Joel A Butterwick, Josefina Del Mármol, Kelly H Kim, Martha A Kahlson, Jackson A Rogow, Thomas Walz, Vanessa Ruta. Nature 2018
124
25

Atypical membrane topology and heteromeric function of Drosophila odorant receptors in vivo.
Richard Benton, Silke Sachse, Stephen W Michnick, Leslie B Vosshall. PLoS Biol 2006
598
25

Combinatorial activation and repression by seven transcription factors specify Drosophila odorant receptor expression.
Shadi Jafari, Liza Alkhori, Alexander Schleiffer, Anna Brochtrup, Thomas Hummel, Mattias Alenius. PLoS Biol 2012
56
25

Elucidating the Neuronal Architecture of Olfactory Glomeruli in the Drosophila Antennal Lobe.
Veit Grabe, Amelie Baschwitz, Hany K M Dweck, Sofia Lavista-Llanos, Bill S Hansson, Silke Sachse. Cell Rep 2016
70
25

Deciphering Brain Complexity Using Single-cell Sequencing.
Quanhua Mu, Yiyun Chen, Jiguang Wang. Genomics Proteomics Bioinformatics 2019
22
25

Complementary function and integrated wiring of the evolutionarily distinct Drosophila olfactory subsystems.
Ana F Silbering, Raphael Rytz, Yael Grosjean, Liliane Abuin, Pavan Ramdya, Gregory S X E Jefferis, Richard Benton. J Neurosci 2011
261
25

Or83b encodes a broadly expressed odorant receptor essential for Drosophila olfaction.
Mattias C Larsson, Ana I Domingos, Walton D Jones, M Eugenia Chiappe, Hubert Amrein, Leslie B Vosshall. Neuron 2004
808
25

A novel family of divergent seven-transmembrane proteins: candidate odorant receptors in Drosophila.
P J Clyne, C G Warr, M R Freeman, D Lessing, J Kim, J R Carlson. Neuron 1999
729
25

Mechanisms of odor receptor gene choice in Drosophila.
Anandasankar Ray, Wynand van der Goes van Naters, Takashi Shiraiwa, John R Carlson. Neuron 2007
78
25

Sensory neuron lineage mapping and manipulation in the Drosophila olfactory system.
Phing Chian Chai, Steeve Cruchet, Leonore Wigger, Richard Benton. Nat Commun 2019
12
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.