A citation-based method for searching scientific literature

Xueshan Cao, Emi Kouyama-Suzuki, Bo Pang, Taiga Kurihara, Takuma Mori, Toru Yanagawa, Yoshinori Shirai, Katsuhiko Tabuchi. Biochem Biophys Res Commun 2020
Times Cited: 5







List of co-cited articles
26 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Unconstrained genome targeting with near-PAMless engineered CRISPR-Cas9 variants.
Russell T Walton, Kathleen A Christie, Madelynn N Whittaker, Benjamin P Kleinstiver. Science 2020
254
60

In vivo genome editing using Staphylococcus aureus Cas9.
F Ann Ran, Le Cong, Winston X Yan, David A Scott, Jonathan S Gootenberg, Andrea J Kriz, Bernd Zetsche, Ophir Shalem, Xuebing Wu, Kira S Makarova,[...]. Nature 2015
40

Increasing the genome-targeting scope and precision of base editing with engineered Cas9-cytidine deaminase fusions.
Y Bill Kim, Alexis C Komor, Jonathan M Levy, Michael S Packer, Kevin T Zhao, David R Liu. Nat Biotechnol 2017
382
40

Evolved Cas9 variants with broad PAM compatibility and high DNA specificity.
Johnny H Hu, Shannon M Miller, Maarten H Geurts, Weixin Tang, Liwei Chen, Ning Sun, Christina M Zeina, Xue Gao, Holly A Rees, Zhi Lin,[...]. Nature 2018
678
40

In vivo genome editing with a small Cas9 orthologue derived from Campylobacter jejuni.
Eunji Kim, Taeyoung Koo, Sung Wook Park, Daesik Kim, Kyoungmi Kim, Hee-Yeon Cho, Dong Woo Song, Kyu Jun Lee, Min Hee Jung, Seokjoong Kim,[...]. Nat Commun 2017
309
40

An APOBEC3A-Cas9 base editor with minimized bystander and off-target activities.
Jason M Gehrke, Oliver Cervantes, M Kendell Clement, Yuxuan Wu, Jing Zeng, Daniel E Bauer, Luca Pinello, J Keith Joung. Nat Biotechnol 2018
187
40

Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression.
Lei S Qi, Matthew H Larson, Luke A Gilbert, Jennifer A Doudna, Jonathan S Weissman, Adam P Arkin, Wendell A Lim. Cell 2013
40

Regulation of homologous recombination in eukaryotes.
Wolf-Dietrich Heyer, Kirk T Ehmsen, Jie Liu. Annu Rev Genet 2010
656
40

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
40

Enhanced homology-directed human genome engineering by controlled timing of CRISPR/Cas9 delivery.
Steven Lin, Brett T Staahl, Ravi K Alla, Jennifer A Doudna. Elife 2014
657
40

Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex.
Silvana Konermann, Mark D Brigham, Alexandro E Trevino, Julia Joung, Omar O Abudayyeh, Clea Barcena, Patrick D Hsu, Naomi Habib, Jonathan S Gootenberg, Hiroshi Nishimasu,[...]. Nature 2015
40

DNA repair protein RAD51 enhances the CRISPR/Cas9-mediated knock-in efficiency in brain neurons.
Taiga Kurihara, Emi Kouyama-Suzuki, Michiru Satoga, Xue Li, Moataz Badawi, Thiha, Deeba Noreen Baig, Toru Yanagawa, Takeshi Uemura, Takuma Mori,[...]. Biochem Biophys Res Commun 2020
13
40

CRISPR RNA-guided activation of endogenous human genes.
Morgan L Maeder, Samantha J Linder, Vincent M Cascio, Yanfang Fu, Quan H Ho, J Keith Joung. Nat Methods 2013
684
40

CRISPR-Cas12a target binding unleashes indiscriminate single-stranded DNase activity.
Janice S Chen, Enbo Ma, Lucas B Harrington, Maria Da Costa, Xinran Tian, Joel M Palefsky, Jennifer A Doudna. Science 2018
851
40

Functional annotation of native enhancers with a Cas9-histone demethylase fusion.
Nicola A Kearns, Hannah Pham, Barbara Tabak, Ryan M Genga, Noah J Silverstein, Manuel Garber, René Maehr. Nat Methods 2015
387
40

Editing DNA Methylation in the Mammalian Genome.
X Shawn Liu, Hao Wu, Xiong Ji, Yonatan Stelzer, Xuebing Wu, Szymon Czauderna, Jian Shu, Daniel Dadon, Richard A Young, Rudolf Jaenisch. Cell 2016
587
40

Search-and-replace genome editing without double-strand breaks or donor DNA.
Andrew V Anzalone, Peyton B Randolph, Jessie R Davis, Alexander A Sousa, Luke W Koblan, Jonathan M Levy, Peter J Chen, Christopher Wilson, Gregory A Newby, Aditya Raguram,[...]. Nature 2019
40

Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage.
Nicole M Gaudelli, Alexis C Komor, Holly A Rees, Michael S Packer, Ahmed H Badran, David I Bryson, David R Liu. Nature 2017
40

A protein-tagging system for signal amplification in gene expression and fluorescence imaging.
Marvin E Tanenbaum, Luke A Gilbert, Lei S Qi, Jonathan S Weissman, Ronald D Vale. Cell 2014
733
40

Highly efficient Cas9-mediated transcriptional programming.
Alejandro Chavez, Jonathan Scheiman, Suhani Vora, Benjamin W Pruitt, Marcelle Tuttle, Eswar P R Iyer, Shuailiang Lin, Samira Kiani, Christopher D Guzman, Daniel J Wiegand,[...]. Nat Methods 2015
736
40

Crystal Structure of Staphylococcus aureus Cas9.
Hiroshi Nishimasu, Le Cong, Winston X Yan, F Ann Ran, Bernd Zetsche, Yinqing Li, Arisa Kurabayashi, Ryuichiro Ishitani, Feng Zhang, Osamu Nureki. Cell 2015
225
40

CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes.
Luke A Gilbert, Matthew H Larson, Leonardo Morsut, Zairan Liu, Gloria A Brar, Sandra E Torres, Noam Stern-Ginossar, Onn Brandman, Evan H Whitehead, Jennifer A Doudna,[...]. Cell 2013
40

Homology-mediated end joining-based targeted integration using CRISPR/Cas9.
Xuan Yao, Xing Wang, Xinde Hu, Zhen Liu, Junlai Liu, Haibo Zhou, Xiaowen Shen, Yu Wei, Zijian Huang, Wenqin Ying,[...]. Cell Res 2017
144
40

Microhomology-mediated end-joining-dependent integration of donor DNA in cells and animals using TALENs and CRISPR/Cas9.
Shota Nakade, Takuya Tsubota, Yuto Sakane, Satoshi Kume, Naoaki Sakamoto, Masanobu Obara, Takaaki Daimon, Hideki Sezutsu, Takashi Yamamoto, Tetsushi Sakuma,[...]. Nat Commun 2014
281
40

Noncanonical views of homology-directed DNA repair.
Priyanka Verma, Roger A Greenberg. Genes Dev 2016
86
40

Microhomology-mediated End Joining and Homologous Recombination share the initial end resection step to repair DNA double-strand breaks in mammalian cells.
Lan N Truong, Yongjiang Li, Linda Z Shi, Patty Yi-Hwa Hwang, Jing He, Hailong Wang, Niema Razavian, Michael W Berns, Xiaohua Wu. Proc Natl Acad Sci U S A 2013
273
40

CRISPR-dCas9 and sgRNA scaffolds enable dual-colour live imaging of satellite sequences and repeat-enriched individual loci.
Yi Fu, Pedro P Rocha, Vincent M Luo, Ramya Raviram, Yan Deng, Esteban O Mazzoni, Jane A Skok. Nat Commun 2016
68
20

CRISPR-Edited Stem Cells in a Patient with HIV and Acute Lymphocytic Leukemia.
Lei Xu, Jun Wang, Yulin Liu, Liangfu Xie, Bin Su, Danlei Mou, Longteng Wang, Tingting Liu, Xiaobao Wang, Bin Zhang,[...]. N Engl J Med 2019
181
20

A CRISPR-Cpf1 system for efficient genome editing and transcriptional repression in plants.
Xu Tang, Levi G Lowder, Tao Zhang, Aimee A Malzahn, Xuelian Zheng, Daniel F Voytas, Zhaohui Zhong, Yiyi Chen, Qiurong Ren, Qian Li,[...]. Nat Plants 2017
71
20

Rapid and accurate detection of African swine fever virus by DNA endonuclease-targeted CRISPR trans reporter assay.
Zongjie Li, Jianchao Wei, Di Di, Xin Wang, Chenxi Li, Beibei Li, Yafeng Qiu, Ke Liu, Feng Gu, Minglong Tong,[...]. Acta Biochim Biophys Sin (Shanghai) 2020
4
25

Genome editing in plants by engineered CRISPR-Cas9 recognizing NG PAM.
Masaki Endo, Masafumi Mikami, Akira Endo, Hidetaka Kaya, Takeshi Itoh, Hiroshi Nishimasu, Osamu Nureki, Seiichi Toki. Nat Plants 2019
78
20

Efficient targeted mutagenesis in potato by the CRISPR/Cas9 system.
Shaohui Wang, Shuaibin Zhang, Wanxing Wang, Xingyao Xiong, Fanrong Meng, Xia Cui. Plant Cell Rep 2015
98
20


Broadening the targeting range of Staphylococcus aureus CRISPR-Cas9 by modifying PAM recognition.
Benjamin P Kleinstiver, Michelle S Prew, Shengdar Q Tsai, Nhu T Nguyen, Ved V Topkar, Zongli Zheng, J Keith Joung. Nat Biotechnol 2015
321
20

Progress and Challenges for Live-cell Imaging of Genomic Loci Using CRISPR-based Platforms.
Xiaotian Wu, Shiqi Mao, Yachen Ying, Christopher J Krueger, Antony K Chen. Genomics Proteomics Bioinformatics 2019
34
20

Mutagenesis of the FAE1 genes significantly changes fatty acid composition in seeds of Camelina sativa.
Mehmet E Ozseyhan, Jinling Kang, Xiaopeng Mu, Chaofu Lu. Plant Physiol Biochem 2018
36
20

Generation of α-solanine-free hairy roots of potato by CRISPR/Cas9 mediated genome editing of the St16DOX gene.
Masaru Nakayasu, Ryota Akiyama, Hyoung Jae Lee, Keishi Osakabe, Yuriko Osakabe, Bunta Watanabe, Yukihiro Sugimoto, Naoyuki Umemoto, Kazuki Saito, Toshiya Muranaka,[...]. Plant Physiol Biochem 2018
42
20

CRISPR/Cas: A powerful tool for gene function study and crop improvement.
Dangquan Zhang, Zhiyong Zhang, Turgay Unver, Baohong Zhang. J Adv Res 2020
17
20

CRISPR/Cas9-induced Targeted Mutagenesis and Gene Replacement to Generate Long-shelf Life Tomato Lines.
Qing-Hui Yu, Baike Wang, Ning Li, Yaping Tang, Shengbao Yang, Tao Yang, Juan Xu, Chunmiao Guo, Peng Yan, Qiang Wang,[...]. Sci Rep 2017
62
20


Versatile Nucleotides Substitution in Plant Using an Improved Prime Editing System.
Wen Xu, Chengwei Zhang, Yongxing Yang, Si Zhao, Guiting Kang, Xiaoqing He, Jinling Song, Jinxiao Yang. Mol Plant 2020
55
20

Evaluation and minimization of Cas9-independent off-target DNA editing by cytosine base editors.
Jordan L Doman, Aditya Raguram, Gregory A Newby, David R Liu. Nat Biotechnol 2020
123
20

CRISPR-Cas9 Targeted Mutagenesis Leads to Simultaneous Modification of Different Homoeologous Gene Copies in Polyploid Oilseed Rape (Brassica napus).
Janina Braatz, Hans-Joachim Harloff, Martin Mascher, Nils Stein, Axel Himmelbach, Christian Jung. Plant Physiol 2017
98
20

High-quality sugar production by osgcs1 rice.
Yujiro Honma, Prakash Babu Adhikari, Keiko Kuwata, Tomoko Kagenishi, Ken Yokawa, Michitaka Notaguchi, Kenichi Kurotani, Erika Toda, Kanako Bessho-Uehara, Xiaoyan Liu,[...]. Commun Biol 2020
3
33

Elimination of Omega-1,2 Gliadins From Bread Wheat (Triticum aestivum) Flour: Effects on Immunogenic Potential and End-Use Quality.
Susan B Altenbach, Han-Chang Chang, Xuechen B Yu, Bradford W Seabourn, Peter H Green, Armin Alaedini. Front Plant Sci 2019
13
20

CRISPR/Cas9-mediated efficient targeted mutagenesis in Chardonnay (Vitis vinifera L.).
Chong Ren, Xianju Liu, Zhan Zhang, Yi Wang, Wei Duan, Shaohua Li, Zhenchang Liang. Sci Rep 2016
99
20

Increasing Cytosine Base Editing Scope and Efficiency With Engineered Cas9-PmCDA1 Fusions and the Modified sgRNA in Rice.
Ying Wu, Wen Xu, Feipeng Wang, Si Zhao, Feng Feng, Jinling Song, Chengwei Zhang, Jinxiao Yang. Front Genet 2019
17
20


Multicolor CRISPR labeling of chromosomal loci in human cells.
Hanhui Ma, Ardalan Naseri, Pablo Reyes-Gutierrez, Scot A Wolfe, Shaojie Zhang, Thoru Pederson. Proc Natl Acad Sci U S A 2015
238
20

Expanding the genome-targeting scope and the site selectivity of high-precision base editors.
Junjie Tan, Fei Zhang, Daniel Karcher, Ralph Bock. Nat Commun 2020
28
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.