A citation-based method for searching scientific literature


List of co-cited articles
2 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Cell-fate determination by ubiquitin-dependent regulation of translation.
Achim Werner, Shintaro Iwasaki, Colleen A McGourty, Sofia Medina-Ruiz, Nia Teerikorpi, Indro Fedrigo, Nicholas T Ingolia, Michael Rape. Nature 2015
88
100

Ubiquitylation at the crossroads of development and disease.
Michael Rape. Nat Rev Mol Cell Biol 2018
177
100

RNF20 and USP44 regulate stem cell differentiation by modulating H2B monoubiquitylation.
Gilad Fuchs, Efrat Shema, Rita Vesterman, Eran Kotler, Zohar Wolchinsky, Sylvia Wilder, Lior Golomb, Ariel Pribluda, Feng Zhang, Mahmood Haj-Yahya,[...]. Mol Cell 2012
134
50

Functional analysis of deubiquitylating enzymes in tumorigenesis and development.
Ji Cheng, Jianping Guo, Brian J North, Bin Wang, Chun-Ping Cui, Hongchang Li, Kaixiong Tao, Lingqiang Zhang, Wenyi Wei. Biochim Biophys Acta Rev Cancer 2019
16
50

Gene Expression Atlas update--a value-added database of microarray and sequencing-based functional genomics experiments.
Misha Kapushesky, Tomasz Adamusiak, Tony Burdett, Aedin Culhane, Anna Farne, Alexey Filippov, Ele Holloway, Andrey Klebanov, Nataliya Kryvych, Natalja Kurbatova,[...]. Nucleic Acids Res 2012
120
50

The auto-generated fragment of the Usp1 deubiquitylase is a physiological substrate of the N-end rule pathway.
Konstantin I Piatkov, Luca Colnaghi, Miklos Békés, Alexander Varshavsky, Tony T Huang. Mol Cell 2012
46
50

The human MAGEL2 gene and its mouse homologue are paternally expressed and mapped to the Prader-Willi region.
I Boccaccio, H Glatt-Deeley, F Watrin, N Roëckel, M Lalande, F Muscatelli. Hum Mol Genet 1999
134
50


BAP1 complex promotes transcription by opposing PRC1-mediated H2A ubiquitylation.
Antoine Campagne, Ming-Kang Lee, Dina Zielinski, Audrey Michaud, Stéphanie Le Corre, Florent Dingli, Hong Chen, Lara Z Shahidian, Ivaylo Vassilev, Nicolas Servant,[...]. Nat Commun 2019
37
50

OTU deubiquitinases reveal mechanisms of linkage specificity and enable ubiquitin chain restriction analysis.
Tycho E T Mevissen, Manuela K Hospenthal, Paul P Geurink, Paul R Elliott, Masato Akutsu, Nadia Arnaudo, Reggy Ekkebus, Yogesh Kulathu, Tobias Wauer, Farid El Oualid,[...]. Cell 2013
304
50

A single MIU motif of MINDY-1 recognizes K48-linked polyubiquitin chains.
Yosua Adi Kristariyanto, Syed Arif Abdul Rehman, Simone Weidlich, Axel Knebel, Yogesh Kulathu. EMBO Rep 2017
28
50

De-ubiquitination and ubiquitin ligase domains of A20 downregulate NF-kappaB signalling.
Ingrid E Wertz, Karen M O'Rourke, Honglin Zhou, Michael Eby, L Aravind, Somasekar Seshagiri, Ping Wu, Christian Wiesmann, Rohan Baker, David L Boone,[...]. Nature 2004
50

Early‑onset epilepsy and microcephaly‑capillary malformation syndrome caused by a novel STAMBP mutation in a Chinese boy.
Fangrui Wu, Ying Dai, Juan Wang, Min Cheng, Yanqin Wang, Xiujuan Li, Ping Yuan, Shuang Liao, Li Jiang, Jin Chen,[...]. Mol Med Rep 2019
2
50

RNF168 binds and amplifies ubiquitin conjugates on damaged chromosomes to allow accumulation of repair proteins.
Carsten Doil, Niels Mailand, Simon Bekker-Jensen, Patrice Menard, Dorthe Helena Larsen, Rainer Pepperkok, Jan Ellenberg, Stephanie Panier, Daniel Durocher, Jiri Bartek,[...]. Cell 2009
631
50

The RIDDLE syndrome protein mediates a ubiquitin-dependent signaling cascade at sites of DNA damage.
Grant S Stewart, Stephanie Panier, Kelly Townsend, Abdallah K Al-Hakim, Nadine K Kolas, Edward S Miller, Shinichiro Nakada, Jarkko Ylanko, Signe Olivarius, Megan Mendez,[...]. Cell 2009
527
50

The demographics of the ubiquitin system.
Michael J Clague, Claire Heride, Sylvie Urbé. Trends Cell Biol 2015
153
50

Defining the human deubiquitinating enzyme interaction landscape.
Mathew E Sowa, Eric J Bennett, Steven P Gygi, J Wade Harper. Cell 2009
50

Systematic survey of deubiquitinase localization identifies USP21 as a regulator of centrosome- and microtubule-associated functions.
Sylvie Urbé, Han Liu, Sebastian D Hayes, Claire Heride, Daniel J Rigden, Michael J Clague. Mol Biol Cell 2012
81
50

Regulation of monoubiquitinated PCNA by DUB autocleavage.
Tony T Huang, Sebastian M B Nijman, Kanchan D Mirchandani, Paul J Galardy, Martin A Cohn, Wilhelm Haas, Steven P Gygi, Hidde L Ploegh, René Bernards, Alan D D'Andrea. Nat Cell Biol 2006
381
50

USP4 is regulated by AKT phosphorylation and directly deubiquitylates TGF-β type I receptor.
Long Zhang, FangFang Zhou, Yvette Drabsch, Rui Gao, B Ewa Snaar-Jagalska, Craig Mickanin, Huizhe Huang, Kelly-Ann Sheppard, Jeff A Porter, Chris X Lu,[...]. Nat Cell Biol 2012
196
50

Loss of Usp9x disrupts cortical architecture, hippocampal development and TGFβ-mediated axonogenesis.
Shane Stegeman, Lachlan A Jolly, Susitha Premarathne, Jozef Gecz, Linda J Richards, Alan Mackay-Sim, Stephen A Wood. PLoS One 2013
46
50

The multiple facets of ubiquitination in the regulation of notch signaling pathway.
Stéphanie Le Bras, Nicolas Loyer, Roland Le Borgne. Traffic 2011
73
50

Ubiquitin hydrolase Uch-L1 rescues beta-amyloid-induced decreases in synaptic function and contextual memory.
Bing Gong, Zixuan Cao, Ping Zheng, Ottavio V Vitolo, Shumin Liu, Agnieszka Staniszewski, Donna Moolman, Hong Zhang, Michael Shelanski, Ottavio Arancio. Cell 2006
306
50

The ubiquitin binding domain ZnF UBP recognizes the C-terminal diglycine motif of unanchored ubiquitin.
Francisca E Reyes-Turcu, John R Horton, James E Mullally, Annie Heroux, Xiaodong Cheng, Keith D Wilkinson. Cell 2006
216
50

The histone H2A deubiquitinase Usp16 regulates hematopoiesis and hematopoietic stem cell function.
Yue Gu, Amanda E Jones, Wei Yang, Shanrun Liu, Qian Dai, Yudong Liu, C Scott Swindle, Dewang Zhou, Zhuo Zhang, Thomas M Ryan,[...]. Proc Natl Acad Sci U S A 2016
38
50

Ubiquitin-Dependent Regulation of Stem Cell Biology.
Achim Werner, Andrew G Manford, Michael Rape. Trends Cell Biol 2017
21
50

CAG expansions in a novel gene for Machado-Joseph disease at chromosome 14q32.1.
Y Kawaguchi, T Okamoto, M Taniwaki, M Aizawa, M Inoue, S Katayama, H Kawakami, S Nakamura, M Nishimura, I Akiguchi. Nat Genet 1994
50

Cellular and disease functions of the Prader-Willi Syndrome gene MAGEL2.
Klementina Fon Tacer, Patrick Ryan Potts. Biochem J 2017
29
50


Mechanisms for regulating deubiquitinating enzymes.
Cynthia Wolberger. Protein Sci 2014
19
50

Multiple faces of the SAGA complex.
Evangelia Koutelou, Calley L Hirsch, Sharon Y R Dent. Curr Opin Cell Biol 2010
163
50

Genome-wide loss-of-function analysis of deubiquitylating enzymes for zebrafish development.
William K F Tse, Birgit Eisenhaber, Steven H K Ho, Qimei Ng, Frank Eisenhaber, Yun-Jin Jiang. BMC Genomics 2009
51
50

hRpn13/ADRM1/GP110 is a novel proteasome subunit that binds the deubiquitinating enzyme, UCH37.
Xiao-Bo Qiu, Song-Ying Ouyang, Chao-Jun Li, Shiying Miao, Linfang Wang, Alfred L Goldberg. EMBO J 2006
173
50

The X-linked deubiquitinase USP9X is an integral component of centrosome.
Qian Wang, Yiman Tang, Yue Xu, Shilei Xu, Yong Jiang, Qiuping Dong, Yongsheng Zhou, Wenshu Ge. J Biol Chem 2017
20
50

The differential modulation of USP activity by internal regulatory domains, interactors and eight ubiquitin chain types.
Alex C Faesen, Mark P A Luna-Vargas, Paul P Geurink, Marcello Clerici, Remco Merkx, Willem J van Dijk, Dharjath S Hameed, Farid El Oualid, Huib Ovaa, Titia K Sixma. Chem Biol 2011
131
50

Allosteric Activation of Ubiquitin-Specific Proteases by β-Propeller Proteins UAF1 and WDR20.
Heng Li, Kah Suan Lim, Hyungjin Kim, Thomas R Hinds, Ukhyun Jo, Haibin Mao, Caroline E Weller, Ji Sun, Champak Chatterjee, Alan D D'Andrea,[...]. Mol Cell 2016
28
50

BAP1/ASXL1 recruitment and activation for H2A deubiquitination.
Danny D Sahtoe, Willem J van Dijk, Reggy Ekkebus, Huib Ovaa, Titia K Sixma. Nat Commun 2016
86
50

A histone H2A deubiquitinase complex coordinating histone acetylation and H1 dissociation in transcriptional regulation.
Ping Zhu, Wenlai Zhou, Jianxun Wang, Janusz Puc, Kenneth A Ohgi, Hediye Erdjument-Bromage, Paul Tempst, Christopher K Glass, Michael G Rosenfeld. Mol Cell 2007
204
50

GMP synthetase stimulates histone H2B deubiquitylation by the epigenetic silencer USP7.
Jan A van der Knaap, B R Prashanth Kumar, Yuri M Moshkin, Karin Langenberg, Jeroen Krijgsveld, Albert J R Heck, François Karch, C Peter Verrijzer. Mol Cell 2005
186
50

PR-DUB maintains the expression of critical genes through FOXK1/2- and ASXL1/2/3-dependent recruitment to chromatin and H2AK119ub1 deubiquitination.
Petros Kolovos, Koutarou Nishimura, Aditya Sankar, Simone Sidoli, Paul A Cloos, Kristian Helin, Jesper Christensen. Genome Res 2020
8
50

Substrate specificity of the ubiquitin and Ubl proteases.
Judith A Ronau, John F Beckmann, Mark Hochstrasser. Cell Res 2016
57
50

Predominant and novel de novo variants in 29 individuals with ALG13 deficiency: Clinical description, biomarker status, biochemical analysis, and treatment suggestions.
Bobby G Ng, Erik A Eklund, Sergey A Shiryaev, Yin Y Dong, Mary-Alice Abbott, Carla Asteggiano, Michael J Bamshad, Eileen Barr, Jonathan A Bernstein, Shabeed Chelakkadan,[...]. J Inherit Metab Dis 2020
6
50

Mechanisms underlying ubiquitination.
C M Pickart. Annu Rev Biochem 2001
50

Deubiquitylase HAUSP stabilizes REST and promotes maintenance of neural progenitor cells.
Zhi Huang, Qiulian Wu, Olga A Guryanova, Lin Cheng, Weinian Shou, Jeremy N Rich, Shideng Bao. Nat Cell Biol 2011
108
50

WDR20 regulates activity of the USP12 x UAF1 deubiquitinating enzyme complex.
Younghoon Kee, Kailin Yang, Martin A Cohn, Wilhelm Haas, Steven P Gygi, Alan D D'Andrea. J Biol Chem 2010
69
50

Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies.
Kim Newton, Marissa L Matsumoto, Ingrid E Wertz, Donald S Kirkpatrick, Jennie R Lill, Jenille Tan, Debra Dugger, Nathaniel Gordon, Sachdev S Sidhu, Frederic A Fellouse,[...]. Cell 2008
427
50

First Replication of the Involvement of OTUD6B in Intellectual Disability Syndrome With Seizures and Dysmorphic Features.
Letizia Straniero, Valeria Rimoldi, Giulia Soldà, Melissa Bellini, Giacomo Biasucci, Rosanna Asselta, Stefano Duga. Front Genet 2018
5
50

Deubiquitylating enzymes and drug discovery: emerging opportunities.
Jeanine A Harrigan, Xavier Jacq, Niall M Martin, Stephen P Jackson. Nat Rev Drug Discov 2018
214
50

Dissenting degradation: Deubiquitinases in cell cycle and cancer.
Thomas Bonacci, Michael J Emanuele. Semin Cancer Biol 2020
9
50

Cilia, neural development and disease.
Sarah K Suciu, Tamara Caspary. Semin Cell Dev Biol 2021
6
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.