A citation-based method for searching scientific literature

Niek van Wietmarschen, Sriram Sridharan, William J Nathan, Anthony Tubbs, Edmond M Chan, Elsa Callen, Wei Wu, Frida Belinky, Veenu Tripathi, Nancy Wong, Kyla Foster, Javad Noorbakhsh, Kiran Garimella, Abimael Cruz-Migoni, Joshua A Sommers, Yongqing Huang, Ashir A Borah, Jonathan T Smith, Jeremie Kalfon, Nikolas Kesten, Kasper Fugger, Robert L Walker, Egor Dolzhenko, Michael A Eberle, Bruce E Hayward, Karen Usdin, Catherine H Freudenreich, Robert M Brosh, Stephen C West, Peter J McHugh, Paul S Meltzer, Adam J Bass, André Nussenzweig. Nature 2020
Times Cited: 22







List of co-cited articles
184 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


WRN helicase is a synthetic lethal target in microsatellite unstable cancers.
Edmond M Chan, Tsukasa Shibue, James M McFarland, Benjamin Gaeta, Mahmoud Ghandi, Nancy Dumont, Alfredo Gonzalez, Justine S McPartlan, Tianxia Li, Yanxi Zhang,[...]. Nature 2019
109
36

Dual Roles of Poly(dA:dT) Tracts in Replication Initiation and Fork Collapse.
Anthony Tubbs, Sriram Sridharan, Niek van Wietmarschen, Yaakov Maman, Elsa Callen, Andre Stanlie, Wei Wu, Xia Wu, Amanda Day, Nancy Wong,[...]. Cell 2018
81
22

The plasticity of DNA replication forks in response to clinically relevant genotoxic stress.
Matteo Berti, David Cortez, Massimo Lopes. Nat Rev Mol Cell Biol 2020
45
18

Prioritization of cancer therapeutic targets using CRISPR-Cas9 screens.
Fiona M Behan, Francesco Iorio, Gabriele Picco, Emanuel Gonçalves, Charlotte M Beaver, Giorgia Migliardi, Rita Santos, Yanhua Rao, Francesco Sassi, Marika Pinnelli,[...]. Nature 2019
330
18

Replication fork reversal triggers fork degradation in BRCA2-defective cells.
Sofija Mijic, Ralph Zellweger, Nagaraja Chappidi, Matteo Berti, Kurt Jacobs, Karun Mutreja, Sebastian Ursich, Arnab Ray Chaudhuri, Andre Nussenzweig, Pavel Janscak,[...]. Nat Commun 2017
159
18

Replication fork stability confers chemoresistance in BRCA-deficient cells.
Arnab Ray Chaudhuri, Elsa Callen, Xia Ding, Ewa Gogola, Alexandra A Duarte, Ji-Eun Lee, Nancy Wong, Vanessa Lafarga, Jennifer A Calvo, Nicholas J Panzarino,[...]. Nature 2016
401
18

DNA clamp function of the monoubiquitinated Fanconi anaemia ID complex.
Renjing Wang, Shengliu Wang, Ankita Dhar, Christopher Peralta, Nikola P Pavletich. Nature 2020
30
18

MRE11 and EXO1 nucleases degrade reversed forks and elicit MUS81-dependent fork rescue in BRCA2-deficient cells.
Delphine Lemaçon, Jessica Jackson, Annabel Quinet, Joshua R Brickner, Shan Li, Stephanie Yazinski, Zhongsheng You, Grzegorz Ira, Lee Zou, Nima Mosammaparast,[...]. Nat Commun 2017
167
18

Sequence and Nuclease Requirements for Breakage and Healing of a Structure-Forming (AT)n Sequence within Fragile Site FRA16D.
Simran Kaushal, Charles E Wollmuth, Kohal Das, Suzanne E Hile, Samantha B Regan, Ryan P Barnes, Alice Haouzi, Soo Mi Lee, Nealia C M House, Michael Guyumdzhyan,[...]. Cell Rep 2019
19
21

Replication stress activates DNA repair synthesis in mitosis.
Sheroy Minocherhomji, Songmin Ying, Victoria A Bjerregaard, Sara Bursomanno, Aiste Aleliunaite, Wei Wu, Hocine W Mankouri, Huahao Shen, Ying Liu, Ian D Hickson. Nature 2015
293
18

Replication Fork Reversal: Players and Guardians.
Annabel Quinet, Delphine Lemaçon, Alessandro Vindigni. Mol Cell 2017
116
13

DNA REPAIR. Mus81 and converging forks limit the mutagenicity of replication fork breakage.
Ryan Mayle, Ian M Campbell, Christine R Beck, Yang Yu, Marenda Wilson, Chad A Shaw, Lotte Bjergbaek, James R Lupski, Grzegorz Ira. Science 2015
125
13

Rad52 prevents excessive replication fork reversal and protects from nascent strand degradation.
Eva Malacaria, Giusj Monia Pugliese, Masayoshi Honda, Veronica Marabitti, Francesca Antonella Aiello, Maria Spies, Annapaola Franchitto, Pietro Pichierri. Nat Commun 2019
39
13

The SMX DNA Repair Tri-nuclease.
Haley D M Wyatt, Rob C Laister, Stephen R Martin, Cheryl H Arrowsmith, Stephen C West. Mol Cell 2017
66
13

Replication-Coupled DNA Repair.
David Cortez. Mol Cell 2019
73
13

DNA2 drives processing and restart of reversed replication forks in human cells.
Saravanabhavan Thangavel, Matteo Berti, Maryna Levikova, Cosimo Pinto, Shivasankari Gomathinayagam, Marko Vujanovic, Ralph Zellweger, Hayley Moore, Eu Han Lee, Eric A Hendrickson,[...]. J Cell Biol 2015
197
13

RAD52 Facilitates Mitotic DNA Synthesis Following Replication Stress.
Rahul Bhowmick, Sheroy Minocherhomji, Ian D Hickson. Mol Cell 2016
184
13

Warsaw Breakage Syndrome associated DDX11 helicase resolves G-quadruplex structures to support sister chromatid cohesion.
Janne J M van Schie, Atiq Faramarz, Jesper A Balk, Grant S Stewart, Erika Cantelli, Anneke B Oostra, Martin A Rooimans, Joanna L Parish, Cynthia de Almeida Estéves, Katja Dumic,[...]. Nat Commun 2020
15
20

Mechanisms of genetic instability caused by (CGG)n repeats in an experimental mammalian system.
Artem V Kononenko, Thomas Ebersole, Karen M Vasquez, Sergei M Mirkin. Nat Struct Mol Biol 2018
19
15


The role of break-induced replication in large-scale expansions of (CAG)n/(CTG)n repeats.
Jane C Kim, Samantha T Harris, Teresa Dinter, Kartik A Shah, Sergei M Mirkin. Nat Struct Mol Biol 2017
50
13

Short Inverted Repeats Are Hotspots for Genetic Instability: Relevance to Cancer Genomes.
Steve Lu, Guliang Wang, Albino Bacolla, Junhua Zhao, Scott Spitser, Karen M Vasquez. Cell Rep 2015
62
13

XPF-ERCC1 acts in Unhooking DNA interstrand crosslinks in cooperation with FANCD2 and FANCP/SLX4.
Daisy Klein Douwel, Rick A C M Boonen, David T Long, Anna A Szypowska, Markus Räschle, Johannes C Walter, Puck Knipscheer. Mol Cell 2014
193
13

Replication-Dependent Unhooking of DNA Interstrand Cross-Links by the NEIL3 Glycosylase.
Daniel R Semlow, Jieqiong Zhang, Magda Budzowska, Alexander C Drohat, Johannes C Walter. Cell 2016
104
13

Alcohol-derived DNA crosslinks are repaired by two distinct mechanisms.
Michael R Hodskinson, Alice Bolner, Koichi Sato, Ashley N Kamimae-Lanning, Koos Rooijers, Merlijn Witte, Mohan Mahesh, Jan Silhan, Maya Petek, David M Williams,[...]. Nature 2020
42
13

Break-induced replication and telomerase-independent telomere maintenance require Pol32.
John R Lydeard, Suvi Jain, Miyuki Yamaguchi, James E Haber. Nature 2007
342
13

TRAIP is a master regulator of DNA interstrand crosslink repair.
R Alex Wu, Daniel R Semlow, Ashley N Kamimae-Lanning, Olga V Kochenova, Gheorghe Chistol, Michael R Hodskinson, Ravindra Amunugama, Justin L Sparks, Meng Wang, Lin Deng,[...]. Nature 2019
63
13

Migrating bubble during break-induced replication drives conservative DNA synthesis.
Natalie Saini, Sreejith Ramakrishnan, Rajula Elango, Sandeep Ayyar, Yu Zhang, Angela Deem, Grzegorz Ira, James E Haber, Kirill S Lobachev, Anna Malkova. Nature 2013
216
13

Rad51-mediated replication fork reversal is a global response to genotoxic treatments in human cells.
Ralph Zellweger, Damian Dalcher, Karun Mutreja, Matteo Berti, Jonas A Schmid, Raquel Herrador, Alessandro Vindigni, Massimo Lopes. J Cell Biol 2015
345
13

Break-induced replication occurs by conservative DNA synthesis.
Roberto A Donnianni, Lorraine S Symington. Proc Natl Acad Sci U S A 2013
119
13

Human RECQ1 promotes restart of replication forks reversed by DNA topoisomerase I inhibition.
Matteo Berti, Arnab Ray Chaudhuri, Saravanabhavan Thangavel, Shivasankari Gomathinayagam, Sasa Kenig, Marko Vujanovic, Federico Odreman, Timo Glatter, Simona Graziano, Ramiro Mendoza-Maldonado,[...]. Nat Struct Mol Biol 2013
244
13

The Fanconi Anemia Pathway in Cancer.
Joshi Niraj, Anniina Färkkilä, Alan D D'Andrea. Annu Rev Cancer Biol 2019
128
13

Werner Syndrome Protein and DNA Replication.
Shibani Mukherjee, Debapriya Sinha, Souparno Bhattacharya, Kalayarasan Srinivasan, Salim Abdisalaam, Aroumougame Asaithamby. Int J Mol Sci 2018
19
15

Positional cloning of the Werner's syndrome gene.
C E Yu, J Oshima, Y H Fu, E M Wijsman, F Hisama, R Alisch, S Matthews, J Nakura, T Miki, S Ouais,[...]. Science 1996
13

DNA double-strand break repair-pathway choice in somatic mammalian cells.
Ralph Scully, Arvind Panday, Rajula Elango, Nicholas A Willis. Nat Rev Mol Cell Biol 2019
303
13

WRN regulates pathway choice between classical and alternative non-homologous end joining.
Raghavendra A Shamanna, Huiming Lu, Jessica K de Freitas, Jane Tian, Deborah L Croteau, Vilhelm A Bohr. Nat Commun 2016
54
13


MUS81 promotes common fragile site expression.
Songmin Ying, Sheroy Minocherhomji, Kok Lung Chan, Timea Palmai-Pallag, Wai Kit Chu, Theresa Wass, Hocine W Mankouri, Ying Liu, Ian D Hickson. Nat Cell Biol 2013
184
13

Coordinated actions of SLX1-SLX4 and MUS81-EME1 for Holliday junction resolution in human cells.
Haley D M Wyatt, Shriparna Sarbajna, Joao Matos, Stephen C West. Mol Cell 2013
179
13

Werner Helicase Is a Synthetic-Lethal Vulnerability in Mismatch Repair-Deficient Colorectal Cancer Refractory to Targeted Therapies, Chemotherapy, and Immunotherapy.
Gabriele Picco, Chiara M Cattaneo, Esmée J van Vliet, Giovanni Crisafulli, Giuseppe Rospo, Sarah Consonni, Sara F Vieira, Iñigo Sánchez Rodríguez, Carlotta Cancelliere, Ruby Banerjee,[...]. Cancer Discov 2021
5
60

Werner syndrome helicase is a selective vulnerability of microsatellite instability-high tumor cells.
Simone Lieb, Silvia Blaha-Ostermann, Elisabeth Kamper, Janine Rippka, Cornelia Schwarz, Katharina Ehrenhöfer-Wölfer, Andreas Schlattl, Andreas Wernitznig, Jesse J Lipp, Kota Nagasaka,[...]. Elife 2019
34
13


Break-induced replication repair of damaged forks induces genomic duplications in human cells.
Lorenzo Costantino, Sotirios K Sotiriou, Juha K Rantala, Simon Magin, Emil Mladenov, Thomas Helleday, James E Haber, George Iliakis, Olli P Kallioniemi, Thanos D Halazonetis. Science 2014
277
13

Folate stress induces SLX1- and RAD51-dependent mitotic DNA synthesis at the fragile X locus in human cells.
Lorenza Garribba, Victoria A Bjerregaard, Marisa M Gonçalves Dinis, Özgün Özer, Wei Wu, Despoina Sakellariou, Javier Pena-Diaz, Ian D Hickson, Ying Liu. Proc Natl Acad Sci U S A 2020
12
25

HMCES Maintains Genome Integrity by Shielding Abasic Sites in Single-Strand DNA.
Kareem N Mohni, Sarah R Wessel, Runxiang Zhao, Andrea C Wojciechowski, Jessica W Luzwick, Hillary Layden, Brandt F Eichman, Petria S Thompson, Kavi P M Mehta, David Cortez. Cell 2019
59
9

Endogenous DNA 3' Blocks Are Vulnerabilities for BRCA1 and BRCA2 Deficiency and Are Reversed by the APE2 Nuclease.
Alejandro Álvarez-Quilón, Jessica L Wojtaszek, Marie-Claude Mathieu, Tejas Patel, C Denise Appel, Nicole Hustedt, Silvia Emma Rossi, Bret D Wallace, Dheva Setiaputra, Salomé Adam,[...]. Mol Cell 2020
27
9

Fork Cleavage-Religation Cycle and Active Transcription Mediate Replication Restart after Fork Stalling at Co-transcriptional R-Loops.
Nagaraja Chappidi, Zuzana Nascakova, Barbora Boleslavska, Ralph Zellweger, Esin Isik, Martin Andrs, Shruti Menon, Jana Dobrovolna, Chiara Balbo Pogliano, Joao Matos,[...]. Mol Cell 2020
40
9

MUS81-EME2 promotes replication fork restart.
Alessandra Pepe, Stephen C West. Cell Rep 2014
79
9

Physiological Tolerance to ssDNA Enables Strand Uncoupling during DNA Replication.
Amaia Ercilla, Jan Benada, Sampath Amitash, Gijs Zonderland, Giorgio Baldi, Kumar Somyajit, Fena Ochs, Vincenzo Costanzo, Jiri Lukas, Luis Toledo. Cell Rep 2020
15
13

CRISPR screens identify genomic ribonucleotides as a source of PARP-trapping lesions.
Michal Zimmermann, Olga Murina, Martin A M Reijns, Angelo Agathanggelou, Rachel Challis, Žygimantė Tarnauskaitė, Morwenna Muir, Adeline Fluteau, Michael Aregger, Andrea McEwan,[...]. Nature 2018
142
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.