A citation-based method for searching scientific literature

Ren Qi, Jin Wu, Fei Guo, Lei Xu, Quan Zou. Brief Bioinform 2021
Times Cited: 5







List of co-cited articles
12 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


SC3: consensus clustering of single-cell RNA-seq data.
Vladimir Yu Kiselev, Kristina Kirschner, Michael T Schaub, Tallulah Andrews, Andrew Yiu, Tamir Chandra, Kedar N Natarajan, Wolf Reik, Mauricio Barahona, Anthony R Green,[...]. Nat Methods 2017
527
40

Gene Therapy Approaches in an Autoimmune Demyelinating Disease: Multiple Sclerosis.
Md A Islam, Shoumik Kundu, Rosline Hassan. Curr Gene Ther 2020
6
40

A RONI Based Visible Watermarking Approach for Medical Image Authentication.
Rohit Thanki, Surekha Borra, Vedvyas Dwivedi, Komal Borisagar. J Med Syst 2017
3
66

Missing value estimation methods for DNA microarrays.
O Troyanskaya, M Cantor, G Sherlock, P Brown, T Hastie, R Tibshirani, D Botstein, R B Altman. Bioinformatics 2001
40

rs34331204 regulates TSPAN13 expression and contributes to Alzheimer's disease with sex differences.
Yang Hu, Haihua Zhang, Bian Liu, Shan Gao, Tao Wang, Zhifa Han, Xunming Ji, Guiyou Liu. Brain 2020
22
40


Predicting therapeutic drugs for hepatocellular carcinoma based on tissue-specific pathways.
Liang Yu, Meng Wang, Yang Yang, Fengdan Xu, Xu Zhang, Fei Xie, Lin Gao, Xiangzhi Li. PLoS Comput Biol 2021
21
40


Indicator Regularized Non-Negative Matrix Factorization Method-Based Drug Repurposing for COVID-19.
Xianfang Tang, Lijun Cai, Yajie Meng, JunLin Xu, Changcheng Lu, Jialiang Yang. Front Immunol 2021
15
40

rs1990622 variant associates with Alzheimer's disease and regulates TMEM106B expression in human brain tissues.
Yang Hu, Jing-Yi Sun, Yan Zhang, Haihua Zhang, Shan Gao, Tao Wang, Zhifa Han, Longcai Wang, Bao-Liang Sun, Guiyou Liu. BMC Med 2021
26
40

DeepLGP: a novel deep learning method for prioritizing lncRNA target genes.
Tianyi Zhao, Yang Hu, Jiajie Peng, Liang Cheng. Bioinformatics 2020
56
40

DincRNA: a comprehensive web-based bioinformatics toolkit for exploring disease associations and ncRNA function.
Liang Cheng, Yang Hu, Jie Sun, Meng Zhou, Qinghua Jiang. Bioinformatics 2018
137
40

Visualizing length of survival in time-to-event studies: a complement to Kaplan-Meier plots.
Patrick Royston, Mahesh K B Parmar, Douglas G Altman. J Natl Cancer Inst 2008
22
20

Cancer statistics, 2020.
Rebecca L Siegel, Kimberly D Miller, Ahmedin Jemal. CA Cancer J Clin 2020
20


Exploration of methylation-driven genes for monitoring and prognosis of patients with lung adenocarcinoma.
Chundi Gao, Jing Zhuang, Huayao Li, Cun Liu, Chao Zhou, Lijuan Liu, Changgang Sun. Cancer Cell Int 2018
32
20

Identification of an eight-gene prognostic signature for lung adenocarcinoma.
Shicheng Li, Yunpeng Xuan, Bing Gao, Xiao Sun, Shuncheng Miao, Tong Lu, Yuanyong Wang, Wenjie Jiao. Cancer Manag Res 2018
42
20


STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets.
Damian Szklarczyk, Annika L Gable, David Lyon, Alexander Junge, Stefan Wyder, Jaime Huerta-Cepas, Milan Simonovic, Nadezhda T Doncheva, John H Morris, Peer Bork,[...]. Nucleic Acids Res 2019
20

Global cancer statistics.
Ahmedin Jemal, Freddie Bray, Melissa M Center, Jacques Ferlay, Elizabeth Ward, David Forman. CA Cancer J Clin 2011
20

Identification of hub genes with prognostic values in gastric cancer by bioinformatics analysis.
Ting Li, Xujie Gao, Lei Han, Jinpu Yu, Hui Li. World J Surg Oncol 2018
35
20


NetworkAnalyst 3.0: a visual analytics platform for comprehensive gene expression profiling and meta-analysis.
Guangyan Zhou, Othman Soufan, Jessica Ewald, Robert E W Hancock, Niladri Basu, Jianguo Xia. Nucleic Acids Res 2019
417
20


Gsslasso Cox: a Bayesian hierarchical model for predicting survival and detecting associated genes by incorporating pathway information.
Zaixiang Tang, Shufeng Lei, Xinyan Zhang, Zixuan Yi, Boyi Guo, Jake Y Chen, Yueping Shen, Nengjun Yi. BMC Bioinformatics 2019
5
20



cytoHubba: identifying hub objects and sub-networks from complex interactome.
Chia-Hao Chin, Shu-Hwa Chen, Hsin-Hung Wu, Chin-Wen Ho, Ming-Tat Ko, Chung-Yen Lin. BMC Syst Biol 2014
20

Integrative Proteomic Characterization of Human Lung Adenocarcinoma.
Jun-Yu Xu, Chunchao Zhang, Xiang Wang, Linhui Zhai, Yiming Ma, Yousheng Mao, Kun Qian, Changqing Sun, Zhiwei Liu, Shangwen Jiang,[...]. Cell 2020
87
20

Schwann cell reprogramming and lung cancer progression: a meta-analysis of transcriptome data.
Victor Menezes Silva, Jessica Alves Gomes, Liliane Patrícia Gonçalves Tenório, Genilda Castro de Omena Neta, Karen da Costa Paixão, Ana Kelly Fernandes Duarte, Gabriel Cerqueira Braz da Silva, Ricardo Jansen Santos Ferreira, Bruna Del Vechio Koike, Carolinne de Sales Marques,[...]. Oncotarget 2019
2
50

Large-scale parametric survival analysis.
Sushil Mittal, David Madigan, Jerry Q Cheng, Randall S Burd. Stat Med 2013
10
20

Genomic landscape of lung adenocarcinoma in East Asians.
Jianbin Chen, Hechuan Yang, Audrey Su Min Teo, Lidyana Bte Amer, Faranak Ghazi Sherbaf, Chu Quan Tan, Jacob Josiah Santiago Alvarez, Bingxin Lu, Jia Qi Lim, Angela Takano,[...]. Nat Genet 2020
97
20

The Cancer Genome Atlas Pan-Cancer analysis project.
John N Weinstein, Eric A Collisson, Gordon B Mills, Kenna R Mills Shaw, Brad A Ozenberger, Kyle Ellrott, Ilya Shmulevich, Chris Sander, Joshua M Stuart. Nat Genet 2013
20

Identification of target gene and prognostic evaluation for lung adenocarcinoma using gene expression meta-analysis, network analysis and neural network algorithms.
Gurudeeban Selvaraj, Satyavani Kaliamurthi, Aman Chandra Kaushik, Abbas Khan, Yong-Kai Wei, William C Cho, Keren Gu, Dong-Qing Wei. J Biomed Inform 2018
30
20

A gene expression-based immune signature for lung adenocarcinoma prognosis.
Lijuan Wang, Xizhi Luo, Chao Cheng, Christopher I Amos, Guoshuai Cai, Feifei Xiao. Cancer Immunol Immunother 2020
9
20

Identification of prognostic genes in adrenocortical carcinoma microenvironment based on bioinformatic methods.
Xiao Li, Yang Gao, Zicheng Xu, Zheng Zhang, Yuxiao Zheng, Feng Qi. Cancer Med 2020
23
20

How does the extracellular matrix direct gene expression?
M J Bissell, H G Hall, G Parry. J Theor Biol 1982
20

Decision boundary feature extraction for neural networks.
C Lee, D A Landgrebe. IEEE Trans Neural Netw 1997
6
20

Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma.
Anoop P Patel, Itay Tirosh, John J Trombetta, Alex K Shalek, Shawn M Gillespie, Hiroaki Wakimoto, Daniel P Cahill, Brian V Nahed, William T Curry, Robert L Martuza,[...]. Science 2014
20

Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing.
Dmitry Usoskin, Alessandro Furlan, Saiful Islam, Hind Abdo, Peter Lönnerberg, Daohua Lou, Jens Hjerling-Leffler, Jesper Haeggström, Olga Kharchenko, Peter V Kharchenko,[...]. Nat Neurosci 2015
962
20

Single-cell RNA-seq reveals novel regulators of human embryonic stem cell differentiation to definitive endoderm.
Li-Fang Chu, Ning Leng, Jue Zhang, Zhonggang Hou, Daniel Mamott, David T Vereide, Jeea Choi, Christina Kendziorski, Ron Stewart, James A Thomson. Genome Biol 2016
145
20



Identifying cell types from single-cell data based on similarities and dissimilarities between cells.
Yuanyuan Li, Ping Luo, Yi Lu, Fang-Xiang Wu. BMC Bioinformatics 2021
2
50

Independent component analysis based gene co-expression network inference (ICAnet) to decipher functional modules for better single-cell clustering and batch integration.
Weixu Wang, Huanhuan Tan, Mingwan Sun, Yiqing Han, Wei Chen, Shengnu Qiu, Ke Zheng, Gang Wei, Ting Ni. Nucleic Acids Res 2021
3
33

RNA Sequencing of Single Human Islet Cells Reveals Type 2 Diabetes Genes.
Yurong Xin, Jinrang Kim, Haruka Okamoto, Min Ni, Yi Wei, Christina Adler, Andrew J Murphy, George D Yancopoulos, Calvin Lin, Jesper Gromada. Cell Metab 2016
246
20

Geometry-based edge clustering for graph visualization.
Weiwei Cui, Hong Zhou, Huamin Qu, Pak Chung Wong, Xiaoming Li. IEEE Trans Vis Comput Graph 2008
30
20

Cancer statistics, 1989.
E Silverberg, J A Lubera. CA Cancer J Clin 1989
451
20

A Mixed-Norm Laplacian Regularized Low-Rank Representation Method for Tumor Samples Clustering.
Juan Wang, Jin-Xing Liu, Chun-Hou Zheng, Ya-Xuan Wang, Xiang-Zhen Kong, Chang-Gang Wen. IEEE/ACM Trans Comput Biol Bioinform 2019
6
20

Reduction of Autophagic Accumulation in Pompe Disease Mouse Model Following Gene Therapy.
Angela L McCall, Sylvia G Stankov, Gabrielle Cowen, Denise Cloutier, Zizhao Zhang, Lin Yang, Nathalie Clement, Darin J Falk, Barry J Byrne. Curr Gene Ther 2019
11
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.