A citation-based method for searching scientific literature


List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect.
A E Eriksson, W A Baase, X J Zhang, D W Heinz, M Blaber, E P Baldwin, B W Matthews. Science 1992
837
50


Fitness trade-offs and environmentally induced mutation buffering in isogenic C. elegans.
M Olivia Casanueva, Alejandro Burga, Ben Lehner. Science 2012
101
50

Potential Pharmacological Chaperones for Cystathionine Beta-Synthase-Deficient Homocystinuria.
Tomas Majtan, Angel L Pey, Paula Gimenez-Mascarell, Luis Alfonso Martínez-Cruz, Csaba Szabo, Viktor Kožich, Jan P Kraus. Handb Exp Pharmacol 2018
24
50

The stability effects of protein mutations appear to be universally distributed.
Nobuhiko Tokuriki, Francois Stricher, Joost Schymkowitz, Luis Serrano, Dan S Tawfik. J Mol Biol 2007
281
50

PoPMuSiC 2.1: a web server for the estimation of protein stability changes upon mutation and sequence optimality.
Yves Dehouck, Jean Marc Kwasigroch, Dimitri Gilis, Marianne Rooman. BMC Bioinformatics 2011
295
50

Dicumarol inhibition of NADPH:quinone oxidoreductase induces growth inhibition of pancreatic cancer via a superoxide-mediated mechanism.
Joseph J Cullen, Marilyn M Hinkhouse, Matthew Grady, Andrew W Gaut, Jingru Liu, Yu Ping Zhang, Christine J Darby Weydert, Frederick E Domann, Larry W Oberley. Cancer Res 2003
100
50

Predicting the impact of Lynch syndrome-causing missense mutations from structural calculations.
Sofie V Nielsen, Amelie Stein, Alexander B Dinitzen, Elena Papaleo, Michael H Tatham, Esben G Poulsen, Maher M Kassem, Lene J Rasmussen, Kresten Lindorff-Larsen, Rasmus Hartmann-Petersen. PLoS Genet 2017
51
50

Toward mechanistic models for genotype-phenotype correlations in phenylketonuria using protein stability calculations.
Rasmus Scheller, Amelie Stein, Sofie V Nielsen, Frederikke I Marin, Anne-Marie Gerdes, Miriam Di Marco, Elena Papaleo, Kresten Lindorff-Larsen, Rasmus Hartmann-Petersen. Hum Mutat 2019
30
50

A General Mechanism for the Propagation of Mutational Effects in Proteins.
Nandakumar Rajasekaran, Swaathiratna Suresh, Soundhararajan Gopi, Karthik Raman, Athi N Naganathan. Biochemistry 2017
40
50

Protein stability and degradation in health and disease.
Lene Clausen, Amanda B Abildgaard, Sarah K Gersing, Amelie Stein, Kresten Lindorff-Larsen, Rasmus Hartmann-Petersen. Adv Protein Chem Struct Biol 2019
13
50

Biophysical and Mechanistic Models for Disease-Causing Protein Variants.
Amelie Stein, Douglas M Fowler, Rasmus Hartmann-Petersen, Kresten Lindorff-Larsen. Trends Biochem Sci 2019
60
50

Hereditary tyrosinemia type I-associated mutations in fumarylacetoacetate hydrolase reduce the enzyme stability and increase its aggregation rate.
Iratxe Macias, Ana Laín, Ganeko Bernardo-Seisdedos, David Gil, Esperanza Gonzalez, Juan M Falcon-Perez, Oscar Millet. J Biol Chem 2019
9
50

Natural Small Molecules as Stabilizers and Activators of Cancer-Associated NQO1 Polymorphisms.
Angel L Pey, Clare F Megarity, Encarnación Medina-Carmona, David J Timson. Curr Drug Targets 2016
22
50





Structure and mechanism of NAD[P]H:quinone acceptor oxidoreductases (NQO).
Mario A Bianchet, Margarita Faig, L Mario Amzel. Methods Enzymol 2004
71
50

How internal cavities destabilize a protein.
Mengjun Xue, Takuro Wakamoto, Camilla Kejlberg, Yuichi Yoshimura, Tania Aaquist Nielsen, Michael Wulff Risør, Kristian Wejse Sanggaard, Ryo Kitahara, Frans A A Mulder. Proc Natl Acad Sci U S A 2019
25
50

PON-P2: prediction method for fast and reliable identification of harmful variants.
Abhishek Niroula, Siddhaling Urolagin, Mauno Vihinen. PLoS One 2015
129
50


A method and server for predicting damaging missense mutations.
Ivan A Adzhubei, Steffen Schmidt, Leonid Peshkin, Vasily E Ramensky, Anna Gerasimova, Peer Bork, Alexey S Kondrashov, Shamil R Sunyaev. Nat Methods 2010
50


A mechanism of ubiquitin-independent proteasomal degradation of the tumor suppressors p53 and p73.
Gad Asher, Peter Tsvetkov, Chaim Kahana, Yosef Shaul. Genes Dev 2005
288
50


Computational and cellular studies reveal structural destabilization and degradation of MLH1 variants in Lynch syndrome.
Amanda B Abildgaard, Amelie Stein, Sofie V Nielsen, Katrine Schultz-Knudsen, Elena Papaleo, Amruta Shrikhande, Eva R Hoffmann, Inge Bernstein, Anne-Marie Gerdes, Masanobu Takahashi,[...]. Elife 2019
18
50


Correction of kinetic and stability defects by tetrahydrobiopterin in phenylketonuria patients with certain phenylalanine hydroxylase mutations.
Heidi Erlandsen, Angel L Pey, Alejandra Gámez, Belén Pérez, Lourdes R Desviat, Cristina Aguado, Richard Koch, Sankar Surendran, Stephen Tyring, Reuben Matalon,[...]. Proc Natl Acad Sci U S A 2004
139
50

SDM: a server for predicting effects of mutations on protein stability.
Arun Prasad Pandurangan, Bernardo Ochoa-Montaño, David B Ascher, Tom L Blundell. Nucleic Acids Res 2017
244
50

The crystal structure of NAD(P)H quinone oxidoreductase 1 in complex with its potent inhibitor dicoumarol.
Gad Asher, Orly Dym, Peter Tsvetkov, Julia Adler, Yosef Shaul. Biochemistry 2006
107
50


Loss of function in phenylketonuria is caused by impaired molecular motions and conformational instability.
Søren W Gersting, Kristina F Kemter, Michael Staudigl, Dunja D Messing, Marta K Danecka, Florian B Lagler, Christian P Sommerhoff, Adelbert A Roscher, Ania C Muntau. Am J Hum Genet 2008
87
50

NAD(P)H:quinone oxidoreductase 1: role as a superoxide scavenger.
David Siegel, Daniel L Gustafson, Donna L Dehn, Jin Yi Han, Preecha Boonchoong, Lawrence J Berliner, David Ross. Mol Pharmacol 2004
340
50

The role of protein denaturation energetics and molecular chaperones in the aggregation and mistargeting of mutants causing primary hyperoxaluria type I.
Noel Mesa-Torres, Israel Fabelo-Rosa, Debora Riverol, Cristina Yunta, Armando Albert, Eduardo Salido, Angel L Pey. PLoS One 2013
40
50

Misfolding of galactose 1-phosphate uridylyltransferase can result in type I galactosemia.
Thomas J McCorvie, Tyler J Gleason, Judith L Fridovich-Keil, David J Timson. Biochim Biophys Acta 2013
32
50

Recognition of enzymes lacking bound cofactor by protein quality control.
Adrián Martínez-Limón, Marion Alriquet, Wei-Han Lang, Giulia Calloni, Ilka Wittig, R Martin Vabulas. Proc Natl Acad Sci U S A 2016
41
50

Functional studies of tyrosine hydroxylase missense variants reveal distinct patterns of molecular defects in Dopa-responsive dystonia.
Agnete Fossbakk, Rune Kleppe, Per M Knappskog, Aurora Martinez, Jan Haavik. Hum Mutat 2014
33
50



Phosphorylation compromises FAD binding and intracellular stability of wild-type and cancer-associated NQO1: Insights into flavo-proteome stability.
Encarnación Medina-Carmona, Bruno Rizzuti, Rubén Martín-Escolano, Juan Luis Pacheco-García, Noel Mesa-Torres, José L Neira, Rita Guzzi, Angel L Pey. Int J Biol Macromol 2019
10
50

Conformational dynamics is key to understanding loss-of-function of NQO1 cancer-associated polymorphisms and its correction by pharmacological ligands.
Encarnación Medina-Carmona, Rogelio J Palomino-Morales, Julian E Fuchs, Esperanza Padín-Gonzalez, Noel Mesa-Torres, Eduardo Salido, David J Timson, Angel L Pey. Sci Rep 2016
33
50

Insight into the specificity and severity of pathogenic mechanisms associated with missense mutations through experimental and structural perturbation analyses.
Encarnación Medina-Carmona, Isabel Betancor-Fernández, Jaime Santos, Noel Mesa-Torres, Silvia Grottelli, Cristina Batlle, Athi N Naganathan, Elisa Oppici, Barbara Cellini, Salvador Ventura,[...]. Hum Mol Genet 2019
12
50

NQO1: A target for the treatment of cancer and neurological diseases, and a model to understand loss of function disease mechanisms.
Sarah K Beaver, Noel Mesa-Torres, Angel L Pey, David J Timson. Biochim Biophys Acta Proteins Proteom 2019
37
50

A Universal Pattern in the Percolation and Dissipation of Protein Structural Perturbations.
Nandakumar Rajasekaran, Ashok Sekhar, Athi N Naganathan. J Phys Chem Lett 2017
32
50


A two-domain structure for the two subunits of NAD(P)H:quinone acceptor oxidoreductase.
S Chen, P S Deng, J M Bailey, K M Swiderek. Protein Sci 1994
37
50

DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability.
Carlos Hm Rodrigues, Douglas Ev Pires, David B Ascher. Nucleic Acids Res 2018
407
50


ROSETTA3: an object-oriented software suite for the simulation and design of macromolecules.
Andrew Leaver-Fay, Michael Tyka, Steven M Lewis, Oliver F Lange, James Thompson, Ron Jacak, Kristian Kaufman, P Douglas Renfrew, Colin A Smith, Will Sheffler,[...]. Methods Enzymol 2011
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.