A citation-based method for searching scientific literature

Galina Glousker, Anna-Sophia Briod, Manfredo Quadroni, Joachim Lingner. EMBO J 2020
Times Cited: 2







List of co-cited articles
10 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Telomere protection by TPP1/POT1 requires tethering to TIN2.
Kaori K Takai, Tatsuya Kibe, Jill R Donigian, David Frescas, Titia de Lange. Mol Cell 2011
137
100

Structural insights into POT1-TPP1 interaction and POT1 C-terminal mutations in human cancer.
Cong Chen, Peili Gu, Jian Wu, Xianyun Chen, Shuangshuang Niu, Hong Sun, Lijie Wu, Na Li, Junhui Peng, Shaohua Shi,[...]. Nat Commun 2017
41
100

Structural and functional analysis of the human POT1-TPP1 telomeric complex.
Cory Rice, Prashanth Krishna Shastrula, Andrew V Kossenkov, Robert Hills, Duncan M Baird, Louise C Showe, Tzanko Doukov, Susan Janicki, Emmanuel Skordalakes. Nat Commun 2017
46
100

Shelterin-Mediated Telomere Protection.
Titia de Lange. Annu Rev Genet 2018
206
100

Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication.
Agnel Sfeir, Settapong T Kosiyatrakul, Dirk Hockemeyer, Sheila L MacRae, Jan Karlseder, Carl L Schildkraut, Titia de Lange. Cell 2009
636
100

TIN2 binds TRF1 and TRF2 simultaneously and stabilizes the TRF2 complex on telomeres.
Jeffrey Zheng-Sheng Ye, Jill R Donigian, Megan van Overbeek, Diego Loayza, Yan Luo, Andrew N Krutchinsky, Brian T Chait, Titia de Lange. J Biol Chem 2004
219
100

Super-resolution fluorescence imaging of telomeres reveals TRF2-dependent T-loop formation.
Ylli Doksani, John Y Wu, Titia de Lange, Xiaowei Zhuang. Cell 2013
260
100

Homologous recombination generates T-loop-sized deletions at human telomeres.
Richard C Wang, Agata Smogorzewska, Titia de Lange. Cell 2004
396
100

Systematic analysis of human telomeric dysfunction using inducible telosome/shelterin CRISPR/Cas9 knockout cells.
Hyeung Kim, Feng Li, Quanyuan He, Tingting Deng, Jun Xu, Feng Jin, Cristian Coarfa, Nagireddy Putluri, Dan Liu, Zhou Songyang. Cell Discov 2017
28
100

TRF2 functions as a protein hub and regulates telomere maintenance by recognizing specific peptide motifs.
Hyeung Kim, Ok-Hee Lee, Huawei Xin, Liuh-Yow Chen, Jun Qin, Heekyung Kate Chae, Shiaw-Yih Lin, Amin Safari, Dan Liu, Zhou Songyang. Nat Struct Mol Biol 2009
93
100

Benchmarking common quantification strategies for large-scale phosphoproteomics.
Alexander Hogrebe, Louise von Stechow, Dorte B Bekker-Jensen, Brian T Weinert, Christian D Kelstrup, Jesper V Olsen. Nat Commun 2018
107
50

Unusual telomeric DNAs in human telomerase-negative immortalized cells.
Akira Nabetani, Fuyuki Ishikawa. Mol Cell Biol 2009
77
50

Telomerase-negative immortalized human cells contain a novel type of promyelocytic leukemia (PML) body.
T R Yeager, A A Neumann, A Englezou, L I Huschtscha, J R Noble, R R Reddel. Cancer Res 1999
492
50

Fission yeast Pot1-Tpp1 protects telomeres and regulates telomere length.
Tomoichiro Miyoshi, Junko Kanoh, Motoki Saito, Fuyuki Ishikawa. Science 2008
160
50


The THO complex component Thp2 counteracts telomeric R-loops and telomere shortening.
Verena Pfeiffer, Jérôme Crittin, Larissa Grolimund, Joachim Lingner. EMBO J 2013
83
50


Global quantification of mammalian gene expression control.
Björn Schwanhäusser, Dorothea Busse, Na Li, Gunnar Dittmar, Johannes Schuchhardt, Jana Wolf, Wei Chen, Matthias Selbach. Nature 2011
50

Telomere Replication Stress Induced by POT1 Inactivation Accelerates Tumorigenesis.
Alexandra M Pinzaru, Robert A Hom, Angela Beal, Aaron F Phillips, Eric Ni, Timothy Cardozo, Nidhi Nair, Jaehyuk Choi, Deborah S Wuttke, Agnel Sfeir,[...]. Cell Rep 2016
59
50

Genome engineering using the CRISPR-Cas9 system.
F Ann Ran, Patrick D Hsu, Jason Wright, Vineeta Agarwala, David A Scott, Feng Zhang. Nat Protoc 2013
50

Pot1 inactivation leads to rampant telomere resection and loss in one cell cycle.
Christopher W Pitt, Julia Promisel Cooper. Nucleic Acids Res 2010
26
50

STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets.
Damian Szklarczyk, Annika L Gable, David Lyon, Alexander Junge, Stefan Wyder, Jaime Huerta-Cepas, Milan Simonovic, Nadezhda T Doncheva, John H Morris, Peer Bork,[...]. Nucleic Acids Res 2019
50

Telosome, a mammalian telomere-associated complex formed by multiple telomeric proteins.
Dan Liu, Matthew S O'Connor, Jun Qin, Zhou Songyang. J Biol Chem 2004
287
50

Recent expansion of the telomeric complex in rodents: Two distinct POT1 proteins protect mouse telomeres.
Dirk Hockemeyer, Jan-Peter Daniels, Hiroyuki Takai, Titia de Lange. Cell 2006
278
50

SMCHD1 promotes ATM-dependent DNA damage signaling and repair of uncapped telomeres.
Aleksandra Vančevska, Wareed Ahmed, Verena Pfeiffer, Marianna Feretzaki, Simon J Boulton, Joachim Lingner. EMBO J 2020
5
50

Genome dynamics of the human embryonic kidney 293 lineage in response to cell biology manipulations.
Yao-Cheng Lin, Morgane Boone, Leander Meuris, Irma Lemmens, Nadine Van Roy, Arne Soete, Joke Reumers, Matthieu Moisse, Stéphane Plaisance, Radoje Drmanac,[...]. Nat Commun 2014
205
50

Telomere Length Determines TERRA and R-Loop Regulation through the Cell Cycle.
Marco Graf, Diego Bonetti, Arianna Lockhart, Kamar Serhal, Vanessa Kellner, André Maicher, Pascale Jolivet, Maria Teresa Teixeira, Brian Luke. Cell 2017
109
50

A quantitative telomeric chromatin isolation protocol identifies different telomeric states.
Larissa Grolimund, Eric Aeby, Romain Hamelin, Florence Armand, Diego Chiappe, Marc Moniatte, Joachim Lingner. Nat Commun 2013
66
50


Pot1 deficiency initiates DNA damage checkpoint activation and aberrant homologous recombination at telomeres.
Ling Wu, Asha S Multani, Hua He, Wilfredo Cosme-Blanco, Yu Deng, Jian Min Deng, Olga Bachilo, Sen Pathak, Hedioshi Tahara, Susan M Bailey,[...]. Cell 2006
296
50

Measuring and managing ratio compression for accurate iTRAQ/TMT quantification.
Mikhail M Savitski, Toby Mathieson, Nico Zinn, Gavain Sweetman, Carola Doce, Isabelle Becher, Fiona Pachl, Bernhard Kuster, Marcus Bantscheff. J Proteome Res 2013
136
50

POT1 protects telomeres from a transient DNA damage response and determines how human chromosomes end.
Dirk Hockemeyer, Agnel J Sfeir, Jerry W Shay, Woodring E Wright, Titia de Lange. EMBO J 2005
215
50



Shotgun proteomics: a relative quantitative approach using Off-Gel electrophoresis and LC-MS/MS.
Laurent Geiser, Loïc Dayon, Ali R Vaezzadeh, Denis F Hochstrasser. Methods Mol Biol 2011
17
50


Isobaric labeling-based relative quantification in shotgun proteomics.
Navin Rauniyar, John R Yates. J Proteome Res 2014
305
50

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
50

Lentivirus-delivered stable gene silencing by RNAi in primary cells.
Sheila A Stewart, Derek M Dykxhoorn, Deborah Palliser, Hana Mizuno, Evan Y Yu, Dong Sung An, David M Sabatini, Irvin S Y Chen, William C Hahn, Phillip A Sharp,[...]. RNA 2003
853
50

Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends.
Claus M Azzalin, Patrick Reichenbach, Lela Khoriauli, Elena Giulotto, Joachim Lingner. Science 2007
809
50

MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes.
Graeme C McAlister, David P Nusinow, Mark P Jedrychowski, Martin Wühr, Edward L Huttlin, Brian K Erickson, Ramin Rad, Wilhelm Haas, Steven P Gygi. Anal Chem 2014
553
50

RNaseH1 regulates TERRA-telomeric DNA hybrids and telomere maintenance in ALT tumour cells.
Rajika Arora, Yongwoo Lee, Harry Wischnewski, Catherine M Brun, Tobias Schwarz, Claus M Azzalin. Nat Commun 2014
196
50

Software lock mass by two-dimensional minimization of peptide mass errors.
Jürgen Cox, Annette Michalski, Matthias Mann. J Am Soc Mass Spectrom 2011
85
50

Stop pulling my strings - what telomeres taught us about the DNA damage response.
Eros Lazzerini-Denchi, Agnel Sfeir. Nat Rev Mol Cell Biol 2016
86
50

Human UPF1 interacts with TPP1 and telomerase and sustains telomere leading-strand replication.
Raghav Chawla, Sophie Redon, Christina Raftopoulou, Harry Wischnewski, Sarantis Gagos, Claus M Azzalin. EMBO J 2011
59
50


Detecting protein-protein interactions by Far western blotting.
Yuliang Wu, Qiang Li, Xing-Zhen Chen. Nat Protoc 2007
201
50

TPP1 OB-fold domain controls telomere maintenance by recruiting telomerase to chromosome ends.
Franklin L Zhong, Luis F Z Batista, Adam Freund, Matthew F Pech, Andrew S Venteicher, Steven E Artandi. Cell 2012
184
50

Proteome-Wide Evaluation of Two Common Protein Quantification Methods.
Jeremy D O'Connell, Joao A Paulo, Jonathon J O'Brien, Steven P Gygi. J Proteome Res 2018
55
50

The Perseus computational platform for comprehensive analysis of (prote)omics data.
Stefka Tyanova, Tikira Temu, Pavel Sinitcyn, Arthur Carlson, Marco Y Hein, Tamar Geiger, Matthias Mann, Jürgen Cox. Nat Methods 2016
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.