A citation-based method for searching scientific literature

Lotte P Watts, Toyoaki Natsume, Yuichiro Saito, Javier Garzon, Qianqian Dong, Lora Boteva, Nick Gilbert, Masato T Kanemaki, Shin-Ichiro Hiraga, Anne D Donaldson. Elife 2020
Times Cited: 3







List of co-cited articles
2 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


3D genome organization contributes to genome instability at fragile sites.
Dan Sarni, Takayo Sasaki, Michal Irony Tur-Sinai, Karin Miron, Juan Carlos Rivera-Mulia, Brian Magnuson, Mats Ljungman, David M Gilbert, Batsheva Kerem. Nat Commun 2020
17
66

Aurora B-mediated abscission checkpoint protects against tetraploidization.
Patrick Steigemann, Claudia Wurzenberger, Michael H A Schmitz, Michael Held, Julien Guizetti, Sandra Maar, Daniel W Gerlich. Cell 2009
428
66

Replication timing of the human genome.
Kathryn Woodfine, Heike Fiegler, David M Beare, John E Collins, Owen T McCann, Bryan D Young, Silvana Debernardi, Richard Mott, Ian Dunham, Nigel P Carter. Hum Mol Genet 2004
243
33

A journey with common fragile sites: From S phase to telophase.
Michelle Debatisse, Filippo Rosselli. Genes Chromosomes Cancer 2019
22
33

Replication Licensing Aberrations, Replication Stress, and Genomic Instability.
Michalis Petropoulos, Spyridon Champeris Tsaniras, Stavros Taraviras, Zoi Lygerou. Trends Biochem Sci 2019
28
33

DNA polymerase theta up-regulation is associated with poor survival in breast cancer, perturbs DNA replication, and promotes genetic instability.
Fanny Lemée, Valérie Bergoglio, Anne Fernandez-Vidal, Alice Machado-Silva, Marie-Jeanne Pillaire, Anne Bieth, Catherine Gentil, Lee Baker, Anne-Laure Martin, Claire Leduc,[...]. Proc Natl Acad Sci U S A 2010
106
33

Pif1-Family Helicases Support Fork Convergence during DNA Replication Termination in Eukaryotes.
Tom D Deegan, Jonathan Baxter, María Ángeles Ortiz Bazán, Joseph T P Yeeles, Karim P M Labib. Mol Cell 2019
27
33

The consensus coding sequences of human breast and colorectal cancers.
Tobias Sjöblom, Siân Jones, Laura D Wood, D Williams Parsons, Jimmy Lin, Thomas D Barber, Diana Mandelker, Rebecca J Leary, Janine Ptak, Natalie Silliman,[...]. Science 2006
33

Relationships between replication timing and GC content of cancer-related genes on human chromosomes 11q and 21q.
Yoshihisa Watanabe, Takashi Abe, Toshimichi Ikemura, Masato Maekawa. Gene 2009
15
33

Developmental differences in genome replication program and origin activation.
Cathia Rausch, Patrick Weber, Paulina Prorok, David Hörl, Andreas Maiser, Anne Lehmkuhl, Vadim O Chagin, Corella S Casas-Delucchi, Heinrich Leonhardt, M Cristina Cardoso. Nucleic Acids Res 2020
3
33

Drosophila duplication hotspots are associated with late-replicating regions of the genome.
Margarida Cardoso-Moreira, J J Emerson, Andrew G Clark, Manyuan Long. PLoS Genet 2011
28
33

dNTP pools determine fork progression and origin usage under replication stress.
Jérôme Poli, Olga Tsaponina, Laure Crabbé, Andrea Keszthelyi, Véronique Pantesco, Andrei Chabes, Armelle Lengronne, Philippe Pasero. EMBO J 2012
181
33

Replication stress interferes with histone recycling and predeposition marking of new histones.
Zuzana Jasencakova, Annette N D Scharf, Katrine Ask, Armelle Corpet, Axel Imhof, Geneviève Almouzni, Anja Groth. Mol Cell 2010
198
33

Replication timing aberrations and aneuploidy in peripheral blood lymphocytes of breast cancer patients.
Helena Grinberg-Rashi, Samuel Cytron, Zully Gelman-Kohan, Talia Litmanovitch, Lydia Avivi. Neoplasia 2010
19
33

The level of origin firing inversely affects the rate of replication fork progression.
Yuan Zhong, Tittu Nellimoottil, Jared M Peace, Simon R V Knott, Sandra K Villwock, Janis M Yee, Jeffrey M Jancuska, Sanket Rege, Marianne Tecklenburg, Robert A Sclafani,[...]. J Cell Biol 2013
50
33

Transcription-replication encounters, consequences and genomic instability.
Anne Helmrich, Monica Ballarino, Evgeny Nudler, Laszlo Tora. Nat Struct Mol Biol 2013
172
33

Negative supercoil at gene boundaries modulates gene topology.
Yathish Jagadheesh Achar, Mohamood Adhil, Ramveer Choudhary, Nick Gilbert, Marco Foiani. Nature 2020
17
33

Oncogenic potential of histone-variant H2A.Z.1 and its regulatory role in cell cycle and epithelial-mesenchymal transition in liver cancer.
Hee Doo Yang, Pum-Joon Kim, Jung Woo Eun, Qingyu Shen, Hyung Seok Kim, Woo Chan Shin, Young Min Ahn, Won Sang Park, Jung Young Lee, Suk Woo Nam. Oncotarget 2016
45
33


High-resolution visualization of H3 variants during replication reveals their controlled recycling.
Camille Clément, Guillermo A Orsi, Alberto Gatto, Ekaterina Boyarchuk, Audrey Forest, Bassam Hajj, Judith Miné-Hattab, Mickaël Garnier, Zachary A Gurard-Levin, Jean-Pierre Quivy,[...]. Nat Commun 2018
28
33

Replication fork movement sets chromatin loop size and origin choice in mammalian cells.
Sylvain Courbet, Sophie Gay, Nausica Arnoult, Gerd Wronka, Mauro Anglana, Olivier Brison, Michelle Debatisse. Nature 2008
159
33

A 'DNA replication' signature of progression and negative outcome in colorectal cancer.
M-J Pillaire, J Selves, K Gordien, P-A Gourraud, C Gentil, M Danjoux, C Do, V Negre, A Bieth, R Guimbaud,[...]. Oncogene 2010
75
33

Topoisomerase II Is Crucial for Fork Convergence during Vertebrate Replication Termination.
Darren R Heintzman, Lillian V Campos, Jo Ann W Byl, Neil Osheroff, James M Dewar. Cell Rep 2019
6
33



DNA replication stress response involving PLK1, CDC6, POLQ, RAD51 and CLASPIN upregulation prognoses the outcome of early/mid-stage non-small cell lung cancer patients.
C Allera-Moreau, I Rouquette, B Lepage, N Oumouhou, M Walschaerts, E Leconte, V Schilling, K Gordien, L Brouchet, M B Delisle,[...]. Oncogenesis 2012
57
33

Topoisomerase I prevents transcription-replication conflicts at transcription termination sites.
Yaqun Liu, Yea-Lih Lin, Philippe Pasero, Chun-Long Chen. Mol Cell Oncol 2020
1
100


High speed of fork progression induces DNA replication stress and genomic instability.
Apolinar Maya-Mendoza, Pavel Moudry, Joanna Maria Merchut-Maya, MyungHee Lee, Robert Strauss, Jiri Bartek. Nature 2018
180
33

Dynamic changes in replication timing and gene expression during lineage specification of human pluripotent stem cells.
Juan Carlos Rivera-Mulia, Quinton Buckley, Takayo Sasaki, Jared Zimmerman, Ruth A Didier, Kristopher Nazor, Jeanne F Loring, Zheng Lian, Sherman Weissman, Allan J Robins,[...]. Genome Res 2015
78
33

AT-dinucleotide rich sequences drive fragile site formation.
Michal Irony-Tur Sinai, Anita Salamon, Noemie Stanleigh, Tchelet Goldberg, Aryeh Weiss, Yuh-Hwa Wang, Batsheva Kerem. Nucleic Acids Res 2019
15
33

Conserved forkhead dimerization motif controls DNA replication timing and spatial organization of chromosomes in S. cerevisiae.
A Zachary Ostrow, Reza Kalhor, Yan Gan, Sandra K Villwock, Christian Linke, Matteo Barberis, Lin Chen, Oscar M Aparicio. Proc Natl Acad Sci U S A 2017
25
33

The deficiency of tumor suppressor prep1 accelerates the onset of meis1- hoxa9 leukemogenesis.
Leila Dardaei, Livia Modica, Giorgio Iotti, Francesco Blasi. PLoS One 2014
7
33

Mechanisms of dNTP supply that play an essential role in maintaining genome integrity in eukaryotic cells.
Hiroyuki Niida, Midori Shimada, Hiroshi Murakami, Makoto Nakanishi. Cancer Sci 2010
51
33

Rif1 regulates the replication timing domains on the human genome.
Satoshi Yamazaki, Aii Ishii, Yutaka Kanoh, Masako Oda, Yasumasa Nishito, Hisao Masai. EMBO J 2012
151
33

Alterations in histone H4 lysine 20 methylation: implications for cancer detection and prevention.
Igor Koturbash, Natalie E Simpson, Frederick A Beland, Igor P Pogribny. Antioxid Redox Signal 2012
16
33

Prevalent, Dynamic, and Conserved R-Loop Structures Associate with Specific Epigenomic Signatures in Mammals.
Lionel A Sanz, Stella R Hartono, Yoong Wearn Lim, Sandra Steyaert, Aparna Rajpurkar, Paul A Ginno, Xiaoqin Xu, Frédéric Chédin. Mol Cell 2016
230
33

Alterations in replication timing of cancer-related genes in malignant human breast cancer cells.
Andrew Fritz, Seema Sinha, Narasimharao Marella, Ronald Berezney. J Cell Biochem 2013
14
33


Genome-wide stability of the DNA replication program in single mammalian cells.
Saori Takahashi, Hisashi Miura, Takahiro Shibata, Koji Nagao, Katsuzumi Okumura, Masato Ogata, Chikashi Obuse, Shin-Ichiro Takebayashi, Ichiro Hiratani. Nat Genet 2019
26
33

Replication timing is regulated by the number of MCMs loaded at origins.
Shankar P Das, Tyler Borrman, Victor W T Liu, Scott C-H Yang, John Bechhoefer, Nicholas Rhind. Genome Res 2015
48
33

Array painting reveals a high frequency of balanced translocations in breast cancer cell lines that break in cancer-relevant genes.
K D Howarth, K A Blood, B L Ng, J C Beavis, Y Chua, S L Cooke, S Raby, K Ichimura, V P Collins, N P Carter,[...]. Oncogene 2008
48
33

DNA damage tolerance: when it's OK to make mistakes.
Debbie J Chang, Karlene A Cimprich. Nat Chem Biol 2009
137
33


Histone hypoacetylation is required to maintain late replication timing of constitutive heterochromatin.
Corella S Casas-Delucchi, Joke G van Bemmel, Sebastian Haase, Henry D Herce, Danny Nowak, Daniela Meilinger, Jeffrey H Stear, Heinrich Leonhardt, M Cristina Cardoso. Nucleic Acids Res 2012
46
33

Evidence that a single replication fork proceeds from early to late replicating domains in the IgH locus in a non-B cell line.
O V Ermakova, L H Nguyen, R D Little, C Chevillard, R Riblet, N Ashouian, B K Birshtein, C L Schildkraut. Mol Cell 1999
63
33




Replication dynamics of the yeast genome.
M K Raghuraman, E A Winzeler, D Collingwood, S Hunt, L Wodicka, A Conway, D J Lockhart, R W Davis, B J Brewer, W L Fangman. Science 2001
588
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.