A citation-based method for searching scientific literature

Sean Paz, Anastasia Ritchie, Christopher Mauer, Massimo Caputi. Cytokine Growth Factor Rev 2021
Times Cited: 6







List of co-cited articles
29 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Roles and mechanisms of alternative splicing in cancer - implications for care.
Sophie C Bonnal, Irene López-Oreja, Juan Valcárcel. Nat Rev Clin Oncol 2020
94
50

The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation.
Vidisha Tripathi, Jonathan D Ellis, Zhen Shen, David Y Song, Qun Pan, Andrew T Watt, Susan M Freier, C Frank Bennett, Alok Sharma, Paula A Bubulya,[...]. Mol Cell 2010
33


The RNA-binding protein HuR is essential for the B cell antibody response.
Manuel D Diaz-Muñoz, Sarah E Bell, Kirsten Fairfax, Elisa Monzon-Casanova, Adam F Cunningham, Mar Gonzalez-Porta, Simon R Andrews, Victoria I Bunik, Kathi Zarnack, Tomaž Curk,[...]. Nat Immunol 2015
82
33

Perspective in Alternative Splicing Coupled to Nonsense-Mediated mRNA Decay.
Juan F García-Moreno, Luísa Romão. Int J Mol Sci 2020
12
33

Alternative splicing as a regulator of development and tissue identity.
Francisco E Baralle, Jimena Giudice. Nat Rev Mol Cell Biol 2017
371
33

Splicing factor SRSF1 controls T cell hyperactivity and systemic autoimmunity.
Takayuki Katsuyama, Hao Li, Denis Comte, George C Tsokos, Vaishali R Moulton. J Clin Invest 2019
23
33



Alternative splicing in aging and longevity.
Malini Bhadra, Porsha Howell, Sneha Dutta, Caroline Heintz, William B Mair. Hum Genet 2020
25
33

Expansion of the eukaryotic proteome by alternative splicing.
Timothy W Nilsen, Brenton R Graveley. Nature 2010
33

RNA mis-splicing in disease.
Marina M Scotti, Maurice S Swanson. Nat Rev Genet 2016
479
33



Splicing-factor alterations in cancers.
Olga Anczuków, Adrian R Krainer. RNA 2016
113
33


Misregulation of pre-mRNA alternative splicing in cancer.
Jian Zhang, James L Manley. Cancer Discov 2013
192
33


View from an mRNP: The Roles of SR Proteins in Assembly, Maturation and Turnover.
Marius Wegener, Michaela Müller-McNicoll. Adv Exp Med Biol 2019
9
33

SR proteins are NXF1 adaptors that link alternative RNA processing to mRNA export.
Michaela Müller-McNicoll, Valentina Botti, Antonio M de Jesus Domingues, Holger Brandl, Oliver D Schwich, Michaela C Steiner, Tomaz Curk, Ina Poser, Kathi Zarnack, Karla M Neugebauer. Genes Dev 2016
145
33


STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
33

Cellular differentiation state modulates the mRNA export activity of SR proteins.
Valentina Botti, François McNicoll, Michaela C Steiner, Florian M Richter, Anfisa Solovyeva, Marius Wegener, Oliver D Schwich, Ina Poser, Kathi Zarnack, Ilka Wittig,[...]. J Cell Biol 2017
33
33

Transportin-SR, a nuclear import receptor for SR proteins.
N Kataoka, J L Bachorik, G Dreyfuss. J Cell Biol 1999
169
33

Shuttling SR proteins: more than splicing factors.
Laure Twyffels, Cyril Gueydan, Véronique Kruys. FEBS J 2011
92
33

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
33



The shuttling SR protein 9G8 plays a role in translation of unspliced mRNA containing a constitutive transport element.
Jennifer E Swartz, Yeou-Cherng Bor, Yukiko Misawa, David Rekosh, Marie-Louise Hammarskjold. J Biol Chem 2007
64
33

Identification of a novel transcript variant of the human CD6 gene that lacks exon 9.
Amit Kumar Kureel, Smita Kumari, Sheetal Saini, Satyaprakash, Bharat Singh, Ambak Kumar Rai. Immunobiology 2019
3
33

IL-13 secreted by ILC2s promotes the self-renewal of intestinal stem cells through circular RNA circPan3.
Pingping Zhu, Xiaoxiao Zhu, Jiayi Wu, Luyun He, Tiankun Lu, Yanying Wang, Benyu Liu, Buqing Ye, Lei Sun, Dongdong Fan,[...]. Nat Immunol 2019
71
16


Differential Interleukin-2 Transcription Kinetics Render Mouse but Not Human T Cells Vulnerable to Splicing Inhibition Early after Activation.
Debojit Bose, Alexander Neumann, Bernd Timmermann, Stefan Meinke, Florian Heyd. Mol Cell Biol 2019
5
20

Alternative splicing of CD45: the tip of the iceberg.
Julie Zikherman, Arthur Weiss. Immunity 2008
32
16

Tuning T Cell Activation: The Function of CD6 At the Immunological Synapse and in T Cell Responses.
Rita F Santos, Liliana Oliveira, Alexandre M Carmo. Curr Drug Targets 2016
25
16

Computational Methods for Predicting Functions at the mRNA Isoform Level.
Sambit K Mishra, Viraj Muthye, Gaurav Kandoi. Int J Mol Sci 2020
1
100

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing.
David E Gordon, Gwendolyn M Jang, Mehdi Bouhaddou, Jiewei Xu, Kirsten Obernier, Kris M White, Matthew J O'Meara, Veronica V Rezelj, Jeffrey Z Guo, Danielle L Swaney,[...]. Nature 2020
16


Altered m6A Modification of Specific Cellular Transcripts Affects Flaviviridae Infection.
Nandan S Gokhale, Alexa B R McIntyre, Melissa D Mattocks, Christopher L Holley, Helen M Lazear, Christopher E Mason, Stacy M Horner. Mol Cell 2020
49
16

Antisense oligonucleotide-mediated exon skipping for Duchenne muscular dystrophy: progress and challenges.
Virginia Arechavala-Gomeza, Karen Anthony, Jennifer Morgan, Francesco Muntoni. Curr Gene Ther 2012
55
16




Killer Ig-like receptor (KIR) genotype predicts the capacity of human KIR-positive CD56dim NK cells to respond to pathogen-associated signals.
Daniel S Korbel, Paul J Norman, Kirsty C Newman, Amir Horowitz, Ketevan Gendzekhadze, Peter Parham, Eleanor M Riley. J Immunol 2009
37
16

Alternative splicing and evolution: diversification, exon definition and function.
Hadas Keren, Galit Lev-Maor, Gil Ast. Nat Rev Genet 2010
610
16

Alternative tumour-specific antigens.
Christof C Smith, Sara R Selitsky, Shengjie Chai, Paul M Armistead, Benjamin G Vincent, Jonathan S Serody. Nat Rev Cancer 2019
85
16

In vitro reconstitution of T cell receptor-mediated segregation of the CD45 phosphatase.
Catherine B Carbone, Nadja Kern, Ricardo A Fernandes, Enfu Hui, Xiaolei Su, K Christopher Garcia, Ronald D Vale. Proc Natl Acad Sci U S A 2017
44
16

The nonsense-mediated RNA decay pathway is disrupted in inflammatory myofibroblastic tumors.
JingWei Lu, Terra-Dawn Plank, Fang Su, XiuJuan Shi, Chen Liu, Yuan Ji, ShuaiJun Li, Andrew Huynh, Chao Shi, Bo Zhu,[...]. J Clin Invest 2016
23
16

Nonsense-mediated mRNA Decay and Cancer.
Maximilian W Popp, Lynne E Maquat. Curr Opin Genet Dev 2018
54
16

rMATS: robust and flexible detection of differential alternative splicing from replicate RNA-Seq data.
Shihao Shen, Juw Won Park, Zhi-xiang Lu, Lan Lin, Michael D Henry, Ying Nian Wu, Qing Zhou, Yi Xing. Proc Natl Acad Sci U S A 2014
667
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.