A citation-based method for searching scientific literature

Alessio P Buccino, Cole L Hurwitz, Samuel Garcia, Jeremy Magland, Joshua H Siegle, Roger Hurwitz, Matthias H Hennig. Elife 2020
Times Cited: 12







List of co-cited articles
36 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A Fully Automated Approach to Spike Sorting.
Jason E Chung, Jeremy F Magland, Alex H Barnett, Vanessa M Tolosa, Angela C Tooker, Kye Y Lee, Kedar G Shah, Sarah H Felix, Loren M Frank, Leslie F Greengard. Neuron 2017
103
58

Fully integrated silicon probes for high-density recording of neural activity.
James J Jun, Nicholas A Steinmetz, Joshua H Siegle, Daniel J Denman, Marius Bauza, Brian Barbarits, Albert K Lee, Costas A Anastassiou, Alexandru Andrei, Çağatay Aydın,[...]. Nature 2017
451
50

A spike sorting toolbox for up to thousands of electrodes validated with ground truth recordings in vitro and in vivo.
Pierre Yger, Giulia Lb Spampinato, Elric Esposito, Baptiste Lefebvre, Stéphane Deny, Christophe Gardella, Marcel Stimberg, Florian Jetter, Guenther Zeck, Serge Picaud,[...]. Elife 2018
69
41

Spike sorting for large, dense electrode arrays.
Cyrille Rossant, Shabnam N Kadir, Dan F M Goodman, John Schulman, Maximilian L D Hunter, Aman B Saleem, Andres Grosmark, Mariano Belluscio, George H Denfield, Alexander S Ecker,[...]. Nat Neurosci 2016
260
41

SpikeForest, reproducible web-facing ground-truth validation of automated neural spike sorters.
Jeremy Magland, James J Jun, Elizabeth Lovero, Alexander J Morley, Cole Lincoln Hurwitz, Alessio Paolo Buccino, Samuel Garcia, Alex H Barnett. Elife 2020
10
40

Past, present and future of spike sorting techniques.
Hernan Gonzalo Rey, Carlos Pedreira, Rodrigo Quian Quiroga. Brain Res Bull 2015
129
33

Unsupervised Spike Sorting for Large-Scale, High-Density Multielectrode Arrays.
Gerrit Hilgen, Martino Sorbaro, Sahar Pirmoradian, Jens-Oliver Muthmann, Ibolya Edit Kepiro, Simona Ullo, Cesar Juarez Ramirez, Albert Puente Encinas, Alessandro Maccione, Luca Berdondini,[...]. Cell Rep 2017
29
33

Quality metrics to accompany spike sorting of extracellular signals.
Daniel N Hill, Samar B Mehta, David Kleinfeld. J Neurosci 2011
188
33

Challenges and opportunities for large-scale electrophysiology with Neuropixels probes.
Nicholas A Steinmetz, Christof Koch, Kenneth D Harris, Matteo Carandini. Curr Opin Neurobiol 2018
64
25

Recent progress in multi-electrode spike sorting methods.
Baptiste Lefebvre, Pierre Yger, Olivier Marre. J Physiol Paris 2016
21
25

SHYBRID: A Graphical Tool for Generating Hybrid Ground-Truth Spiking Data for Evaluating Spike Sorting Performance.
Jasper Wouters, Fabian Kloosterman, Alexander Bertrand. Neuroinformatics 2021
3
100

Accuracy of tetrode spike separation as determined by simultaneous intracellular and extracellular measurements.
K D Harris, D A Henze, J Csicsvari, H Hirase, G Buzsáki. J Neurophysiol 2000
677
25

Combining biophysical modeling and deep learning for multielectrode array neuron localization and classification.
Alessio P Buccino, Michael Kordovan, Torbjørn V Ness, Benjamin Merkt, Philipp D Häfliger, Marianne Fyhn, Gert Cauwenberghs, Stefan Rotter, Gaute T Einevoll. J Neurophysiol 2018
5
60

The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex.
Srikanth Ramaswamy, Jean-Denis Courcol, Marwan Abdellah, Stanislaw R Adaszewski, Nicolas Antille, Selim Arsever, Guy Atenekeng, Ahmet Bilgili, Yury Brukau, Athanassia Chalimourda,[...]. Front Neural Circuits 2015
53
16

Unsupervised spike detection and sorting with wavelets and superparamagnetic clustering.
R Quian Quiroga, Z Nadasdy, Y Ben-Shaul. Neural Comput 2004
920
16

Automatic spike sorting for high-density microelectrode arrays.
Roland Diggelmann, Michele Fiscella, Andreas Hierlemann, Felix Franke. J Neurophysiol 2018
7
28

Reconstruction and Simulation of Neocortical Microcircuitry.
Henry Markram, Eilif Muller, Srikanth Ramaswamy, Michael W Reimann, Marwan Abdellah, Carlos Aguado Sanchez, Anastasia Ailamaki, Lidia Alonso-Nanclares, Nicolas Antille, Selim Arsever,[...]. Cell 2015
463
16

Validating silicon polytrodes with paired juxtacellular recordings: method and dataset.
Joana P Neto, Gonçalo Lopes, João Frazão, Joana Nogueira, Pedro Lacerda, Pedro Baião, Arno Aarts, Alexandru Andrei, Silke Musa, Elvira Fortunato,[...]. J Neurophysiol 2016
35
16

Active pixel sensor array for high spatio-temporal resolution electrophysiological recordings from single cell to large scale neuronal networks.
Luca Berdondini, Kilian Imfeld, Alessandro Maccione, Mariateresa Tedesco, Simon Neukom, Milena Koudelka-Hep, Sergio Martinoia. Lab Chip 2009
154
16

Towards reliable spike-train recordings from thousands of neurons with multielectrodes.
Gaute T Einevoll, Felix Franke, Espen Hagen, Christophe Pouzat, Kenneth D Harris. Curr Opin Neurobiol 2012
105
16

Neo: an object model for handling electrophysiology data in multiple formats.
Samuel Garcia, Domenico Guarino, Florent Jaillet, Todd Jennings, Robert Pröpper, Philipp L Rautenberg, Chris C Rodgers, Andrey Sobolev, Thomas Wachtler, Pierre Yger,[...]. Front Neuroinform 2014
47
16

On the variability of manual spike sorting.
Frank Wood, Michael J Black, Carlos Vargas-Irwin, Matthew Fellows, John P Donoghue. IEEE Trans Biomed Eng 2004
67
16

Ultraflexible nanoelectronic probes form reliable, glial scar-free neural integration.
Lan Luan, Xiaoling Wei, Zhengtuo Zhao, Jennifer J Siegel, Ojas Potnis, Catherine A Tuppen, Shengqing Lin, Shams Kazmi, Robert A Fowler, Stewart Holloway,[...]. Sci Adv 2017
148
16

An approach for long-term, multi-probe Neuropixels recordings in unrestrained rats.
Thomas Zhihao Luo, Adrian Gopnik Bondy, Diksha Gupta, Verity Alexander Elliott, Charles D Kopec, Carlos D Brody. Elife 2020
8
25

Distributed coding of choice, action and engagement across the mouse brain.
Nicholas A Steinmetz, Peter Zatka-Haas, Matteo Carandini, Kenneth D Harris. Nature 2019
98
16

SiNAPS: An implantable active pixel sensor CMOS-probe for simultaneous large-scale neural recordings.
Gian Nicola Angotzi, Fabio Boi, Aziliz Lecomte, Ermanno Miele, Mario Malerba, Stefano Zucca, Antonino Casile, Luca Berdondini. Biosens Bioelectron 2019
23
16

High-resolution CMOS MEA platform to study neurons at subcellular, cellular, and network levels.
Jan Müller, Marco Ballini, Paolo Livi, Yihui Chen, Milos Radivojevic, Amir Shadmani, Vijay Viswam, Ian L Jones, Michele Fiscella, Roland Diggelmann,[...]. Lab Chip 2015
80
16

A 1024-Channel CMOS Microelectrode Array With 26,400 Electrodes for Recording and Stimulation of Electrogenic Cells In Vitro.
Marco Ballini, Jan Müller, Paolo Livi, Yihui Chen, Urs Frey, Alexander Stettler, Amir Shadmani, Vijay Viswam, Ian Lloyd Jones, David Jäckel,[...]. IEEE J Solid-State Circuits 2014
54
16


Continuing progress of spike sorting in the era of big data.
David Carlson, Lawrence Carin. Curr Opin Neurobiol 2019
5
40

MEArec: A Fast and Customizable Testbench Simulator for Ground-truth Extracellular Spiking Activity.
Alessio Paolo Buccino, Gaute Tomas Einevoll. Neuroinformatics 2021
3
66

Experimental Directory Structure (Exdir): An Alternative to HDF5 Without Introducing a New File Format.
Svenn-Arne Dragly, Milad Hobbi Mobarhan, Mikkel E Lepperød, Simen Tennøe, Marianne Fyhn, Torkel Hafting, Anders Malthe-Sørenssen. Front Neuroinform 2018
4
50

Open Ephys: an open-source, plugin-based platform for multichannel electrophysiology.
Joshua H Siegle, Aarón Cuevas López, Yogi A Patel, Kirill Abramov, Shay Ohayon, Jakob Voigts. J Neural Eng 2017
115
16

Neurodata Without Borders: Creating a Common Data Format for Neurophysiology.
Jeffery L Teeters, Keith Godfrey, Rob Young, Chinh Dang, Claudia Friedsam, Barry Wark, Hiroki Asari, Simon Peron, Nuo Li, Adrien Peyrache,[...]. Neuron 2015
57
16

Temporal interaction between single spikes and complex spike bursts in hippocampal pyramidal cells.
K D Harris, H Hirase, X Leinekugel, D A Henze, G Buzsáki. Neuron 2001
246
16

SciPy 1.0: fundamental algorithms for scientific computing in Python.
Pauli Virtanen, Ralf Gommers, Travis E Oliphant, Matt Haberland, Tyler Reddy, David Cournapeau, Evgeni Burovski, Pearu Peterson, Warren Weckesser, Jonathan Bright,[...]. Nat Methods 2020
16

LFPy: a tool for biophysical simulation of extracellular potentials generated by detailed model neurons.
Henrik Lindén, Espen Hagen, Szymon Lęski, Eivind S Norheim, Klas H Pettersen, Gaute T Einevoll. Front Neuroinform 2014
65
8

Microelectronic system for high-resolution mapping of extracellular electric fields applied to brain slices.
U Frey, U Egert, F Heer, S Hafizovic, A Hierlemann. Biosens Bioelectron 2009
108
8

Independent Component Analysis for Fully Automated Multi-Electrode Array Spike Sorting.
Alessio P Buccino, Espen Hagen, Gaute T Einevoll, Philipp D Hafliger, Gert Cauwenbergh. Annu Int Conf IEEE Eng Med Biol Soc 2018
3
33

Automated in vivo patch-clamp evaluation of extracellular multielectrode array spike recording capability.
Brian D Allen, Caroline Moore-Kochlacs, Jacob G Bernstein, Justin P Kinney, Jorg Scholvin, Luís F Seoane, Chris Chronopoulos, Charlie Lamantia, Suhasa B Kodandaramaiah, Max Tegmark,[...]. J Neurophysiol 2018
5
20

Intracellular features predicted by extracellular recordings in the hippocampus in vivo.
D A Henze, Z Borhegyi, J Csicsvari, A Mamiya, K D Harris, G Buzsáki. J Neurophysiol 2000
483
8

Models of neocortical layer 5b pyramidal cells capturing a wide range of dendritic and perisomatic active properties.
Etay Hay, Sean Hill, Felix Schürmann, Henry Markram, Idan Segev. PLoS Comput Biol 2011
120
8

A detailed and fast model of extracellular recordings.
Luis A Camuñas-Mesa, Rodrigo Quian Quiroga. Neural Comput 2013
29
8

An automated online positioning system and simulation environment for multi-electrodes in extracellular recordings.
Felix Franke, Michal Natora, Philipp Meier, Espen Hagen, Klas H Pettersen, Henrik Linden, Gaute T Einevoll, Klaus Obermayer. Annu Int Conf IEEE Eng Med Biol Soc 2010
5
20

Modelling and Analysis of Electrical Potentials Recorded in Microelectrode Arrays (MEAs).
Torbjørn V Ness, Chaitanya Chintaluri, Jan Potworowski, Szymon Łęski, Helena Głąbska, Daniel K Wójcik, Gaute T Einevoll. Neuroinformatics 2015
39
8

Bio-inspired benchmark generator for extracellular multi-unit recordings.
Sirenia Lizbeth Mondragón-González, Eric Burguière. Sci Rep 2017
2
50

Applicability of independent component analysis on high-density microelectrode array recordings.
David Jäckel, Urs Frey, Michele Fiscella, Felix Franke, Andreas Hierlemann. J Neurophysiol 2012
39
8

Systematic generation of biophysically detailed models for diverse cortical neuron types.
Nathan W Gouwens, Jim Berg, David Feng, Staci A Sorensen, Hongkui Zeng, Michael J Hawrylycz, Christof Koch, Anton Arkhipov. Nat Commun 2018
32
8

ViSAPy: a Python tool for biophysics-based generation of virtual spiking activity for evaluation of spike-sorting algorithms.
Espen Hagen, Torbjørn V Ness, Amir Khosrowshahi, Christina Sørensen, Marianne Fyhn, Torkel Hafting, Felix Franke, Gaute T Einevoll. J Neurosci Methods 2015
22
8

How does the presence of neural probes affect extracellular potentials?
Alessio Paolo Buccino, Miroslav Kuchta, Karoline Horgmo Jæger, Torbjørn Vefferstad Ness, Pierre Berthet, Kent-Andre Mardal, Gert Cauwenberghs, Aslak Tveito. J Neural Eng 2019
5
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.