A citation-based method for searching scientific literature

Saige L Pompura, Allon Wagner, Alexandra Kitz, Jacob LaPerche, Nir Yosef, Margarita Dominguez-Villar, David A Hafler. J Clin Invest 2021
Times Cited: 8







List of co-cited articles
22 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation.
Nicholas Arpaia, Clarissa Campbell, Xiying Fan, Stanislav Dikiy, Joris van der Veeken, Paul deRoos, Hui Liu, Justin R Cross, Klaus Pfeffer, Paul J Coffer,[...]. Nature 2013
37

Microbial bile acid metabolites modulate gut RORγ+ regulatory T cell homeostasis.
Xinyang Song, Ximei Sun, Sungwhan F Oh, Meng Wu, Yanbo Zhang, Wen Zheng, Naama Geva-Zatorsky, Ray Jupp, Diane Mathis, Christophe Benoist,[...]. Nature 2020
197
25

Differential modulation of Toll-like receptors by fatty acids: preferential inhibition by n-3 polyunsaturated fatty acids.
Joo Y Lee, Anthony Plakidas, Won H Lee, Anne Heikkinen, Prithiva Chanmugam, George Bray, Daniel H Hwang. J Lipid Res 2003
383
25


MUCOSAL IMMUNOLOGY. Individual intestinal symbionts induce a distinct population of RORγ⁺ regulatory T cells.
Esen Sefik, Naama Geva-Zatorsky, Sungwhan Oh, Liza Konnikova, David Zemmour, Abigail Manson McGuire, Dalia Burzyn, Adriana Ortiz-Lopez, Mercedes Lobera, Jianfei Yang,[...]. Science 2015
407
25

Stability of the regulatory T cell lineage in vivo.
Yuri P Rubtsov, Rachel E Niec, Steven Josefowicz, Li Li, Jaime Darce, Diane Mathis, Christophe Benoist, Alexander Y Rudensky. Science 2010
479
25

Role of conserved non-coding DNA elements in the Foxp3 gene in regulatory T-cell fate.
Ye Zheng, Steven Josefowicz, Ashutosh Chaudhry, Xiao P Peng, Katherine Forbush, Alexander Y Rudensky. Nature 2010
777
25


Single-Cell Transcriptomics of Regulatory T Cells Reveals Trajectories of Tissue Adaptation.
Ricardo J Miragaia, Tomás Gomes, Agnieszka Chomka, Laura Jardine, Angela Riedel, Ahmed N Hegazy, Natasha Whibley, Andrea Tucci, Xi Chen, Ida Lindeman,[...]. Immunity 2019
140
25

Distinct Foxp3 enhancer elements coordinate development, maintenance, and function of regulatory T cells.
Ryoji Kawakami, Yohko Kitagawa, Kelvin Y Chen, Masaya Arai, Daiya Ohara, Yamami Nakamura, Keiko Yasuda, Motonao Osaki, Norihisa Mikami, Caleb A Lareau,[...]. Immunity 2021
7
28

T cell receptor stimulation-induced epigenetic changes and Foxp3 expression are independent and complementary events required for Treg cell development.
Naganari Ohkura, Masahide Hamaguchi, Hiromasa Morikawa, Kyoko Sugimura, Atsushi Tanaka, Yoshinaga Ito, Motonao Osaki, Yoshiaki Tanaka, Riu Yamashita, Naoko Nakano,[...]. Immunity 2012
448
25


Epigenetic control of the foxp3 locus in regulatory T cells.
Stefan Floess, Jennifer Freyer, Christiane Siewert, Udo Baron, Sven Olek, Julia Polansky, Kerstin Schlawe, Hyun-Dong Chang, Tobias Bopp, Edgar Schmitt,[...]. PLoS Biol 2007
883
25

Guidance of regulatory T cell development by Satb1-dependent super-enhancer establishment.
Yohko Kitagawa, Naganari Ohkura, Yujiro Kidani, Alexis Vandenbon, Keiji Hirota, Ryoji Kawakami, Keiko Yasuda, Daisuke Motooka, Shota Nakamura, Motonari Kondo,[...]. Nat Immunol 2017
174
25

Precursors for Nonlymphoid-Tissue Treg Cells Reside in Secondary Lymphoid Organs and Are Programmed by the Transcription Factor BATF.
Michael Delacher, Charles D Imbusch, Agnes Hotz-Wagenblatt, Jan-Philipp Mallm, Katharina Bauer, Malte Simon, Dania Riegel, André F Rendeiro, Sebastian Bittner, Lieke Sanderink,[...]. Immunity 2020
41
25

The Proteomic Landscape of Human Ex Vivo Regulatory and Conventional T Cells Reveals Specific Metabolic Requirements.
Claudio Procaccini, Fortunata Carbone, Dario Di Silvestre, Francesca Brambilla, Veronica De Rosa, Mario Galgani, Deriggio Faicchia, Gianni Marone, Donatella Tramontano, Marco Corona,[...]. Immunity 2016
136
25

HIF1alpha-dependent glycolytic pathway orchestrates a metabolic checkpoint for the differentiation of TH17 and Treg cells.
Lewis Z Shi, Ruoning Wang, Gonghua Huang, Peter Vogel, Geoffrey Neale, Douglas R Green, Hongbo Chi. J Exp Med 2011
25

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position.
Jason D Buenrostro, Paul G Giresi, Lisa C Zaba, Howard Y Chang, William J Greenleaf. Nat Methods 2013
25

De novo fatty acid synthesis controls the fate between regulatory T and T helper 17 cells.
Luciana Berod, Christin Friedrich, Amrita Nandan, Jenny Freitag, Stefanie Hagemann, Kirsten Harmrolfs, Aline Sandouk, Christina Hesse, Carla N Castro, Heike Bähre,[...]. Nat Med 2014
432
25

Metabolic programming and PDHK1 control CD4+ T cell subsets and inflammation.
Valerie A Gerriets, Rigel J Kishton, Amanda G Nichols, Andrew N Macintyre, Makoto Inoue, Olga Ilkayeva, Peter S Winter, Xiaojing Liu, Bhavana Priyadharshini, Marta E Slawinska,[...]. J Clin Invest 2015
362
25

Critical role of histone demethylase Jmjd3 in the regulation of CD4+ T-cell differentiation.
Qingtian Li, Jia Zou, Mingjun Wang, Xilai Ding, Iouri Chepelev, Xikun Zhou, Wei Zhao, Gang Wei, Jun Cui, Keji Zhao,[...]. Nat Commun 2014
89
25

Cutting edge: distinct glycolytic and lipid oxidative metabolic programs are essential for effector and regulatory CD4+ T cell subsets.
Ryan D Michalek, Valerie A Gerriets, Sarah R Jacobs, Andrew N Macintyre, Nancie J MacIver, Emily F Mason, Sarah A Sullivan, Amanda G Nichols, Jeffrey C Rathmell. J Immunol 2011
25



Effects of vendor and genetic background on the composition of the fecal microbiota of inbred mice.
Aaron C Ericsson, J Wade Davis, William Spollen, Nathan Bivens, Scott Givan, Catherine E Hagan, Mark McIntosh, Craig L Franklin. PLoS One 2015
176
12


Docosahexaenoic acid, a ligand for the retinoid X receptor in mouse brain.
A M de Urquiza, S Liu, M Sjöberg, R H Zetterström, W Griffiths, J Sjövall, T Perlmann. Science 2000
550
12

Antibacterial Free Fatty Acids and Monoglycerides: Biological Activities, Experimental Testing, and Therapeutic Applications.
Bo Kyeong Yoon, Joshua A Jackman, Elba R Valle-González, Nam-Joon Cho. Int J Mol Sci 2018
101
12

Effect of adiponectin on murine colitis induced by dextran sulfate sodium.
Tamao Nishihara, Morihiro Matsuda, Hiroshi Araki, Kazuya Oshima, Shinji Kihara, Tohru Funahashi, Iichiro Shimomura. Gastroenterology 2006
103
12

Tumour exosome integrins determine organotropic metastasis.
Ayuko Hoshino, Bruno Costa-Silva, Tang-Long Shen, Goncalo Rodrigues, Ayako Hashimoto, Milica Tesic Mark, Henrik Molina, Shinji Kohsaka, Angela Di Giannatale, Sophia Ceder,[...]. Nature 2015
12

Saturated long-chain fatty acid-producing bacteria contribute to enhanced colonic motility in rats.
Ling Zhao, Yufen Huang, Lin Lu, Wei Yang, Tao Huang, Zesi Lin, Chengyuan Lin, Hiuyee Kwan, Hoi Leong Xavier Wong, Yang Chen,[...]. Microbiome 2018
33
12


The role of cyclooxygenase in n-6 and n-3 polyunsaturated fatty acid mediated effects on cell proliferation, PGE(2) synthesis and cytotoxicity in human colorectal carcinoma cell lines.
Yvonne E M Dommels, Merel M G Haring, Nynke G M Keestra, Gerrit M Alink, Peter J van Bladeren, Ben van Ommen. Carcinogenesis 2003
97
12

Odd-numbered agaro-oligosaccharides alleviate type 2 diabetes mellitus and related colonic microbiota dysbiosis in mice.
Xueliang Wang, Zimei Yang, Xu Xu, Hao Jiang, Chao Cai, Guangli Yu. Carbohydr Polym 2020
9
12

Regulation of 12-lipoxygenase in rat intestinal epithelial cells during differentiation and apoptosis induced by sodium butyrate.
H Kamitani, H Ikawa, L C Hsi, T Watanabe, R N DuBois, T E Eling. Arch Biochem Biophys 1999
30
12

Exosomes facilitate therapeutic targeting of oncogenic KRAS in pancreatic cancer.
Sushrut Kamerkar, Valerie S LeBleu, Hikaru Sugimoto, Sujuan Yang, Carolina F Ruivo, Sonia A Melo, J Jack Lee, Raghu Kalluri. Nature 2017
846
12

Extra-Virgin Olive Oil from Apulian Cultivars and Intestinal Inflammation.
Marica Cariello, Annalisa Contursi, Raffaella Maria Gadaleta, Elena Piccinin, Stefania De Santis, Marilidia Piglionica, Ada Fiorenza Spaziante, Carlo Sabbà, Gaetano Villani, Antonio Moschetta. Nutrients 2020
16
12

Influence of dietary saturated fat content on adiposity, macrophage behavior, inflammation, and metabolism: composition matters.
Reilly T Enos, J Mark Davis, Kandy T Velázquez, Jamie L McClellan, Stani D Day, Kevin A Carnevale, E Angela Murphy. J Lipid Res 2013
73
12

Molecular circuits of resolution: formation and actions of resolvins and protectins.
Gerard L Bannenberg, Nan Chiang, Amiram Ariel, Makoto Arita, Eric Tjonahen, Katherine H Gotlinger, Song Hong, Charles N Serhan. J Immunol 2005
488
12

Western-style diets induce macrophage infiltration and contribute to colitis-associated carcinogenesis.
In-Wha Kim, Seung-Jae Myung, Mi Young Do, Yeon-Mi Ryu, Mi Jung Kim, Eun-Ju Do, Sehan Park, Soon Man Yoon, Byong Duk Ye, Jeong-Sik Byeon,[...]. J Gastroenterol Hepatol 2010
29
12

An α-linolenic acid-rich formula reduces oxidative stress and inflammation by regulating NF-κB in rats with TNBS-induced colitis.
Aktham Hassan, Ayman Ibrahim, Khaly Mbodji, Moïse Coëffier, Frédéric Ziegler, Frédéric Bounoure, Jean-Michel Chardigny, Mohamed Skiba, Guillaume Savoye, Pierre Déchelotte,[...]. J Nutr 2010
88
12

Enteral diets enriched with medium-chain triglycerides and N-3 fatty acids prevent chemically induced experimental colitis in rats.
Hiroshi Kono, Hideki Fujii, Masahito Ogiku, Masato Tsuchiya, Kenichi Ishii, Michio Hara. Transl Res 2010
25
12

Role of Resolvins in the Inflammatory Resolution of Neurological Diseases.
Chunrong Li, Xiujuan Wu, Shan Liu, Donghui Shen, Jie Zhu, Kangding Liu. Front Pharmacol 2020
12
12

Ghrelin ameliorates colonic inflammation. Role of nitric oxide and sensory nerves.
P C Konturek, T Brzozowski, M Engel, G Burnat, P Gaca, S Kwiecien, R Pajdo, S J Konturek. J Physiol Pharmacol 2009
60
12

Influence of environmental factors in the development of inflammatory bowel diseases.
Evangelia Legaki, Maria Gazouli. World J Gastrointest Pharmacol Ther 2016
49
12



High-fat diet-derived free fatty acids impair the intestinal immune system and increase sensitivity to intestinal epithelial damage.
Shohei Tanaka, Yasuhiro Nemoto, Yuria Takei, Ryo Morikawa, Shigeru Oshima, Takashi Nagaishi, Ryuichi Okamoto, Kiichiro Tsuchiya, Tetsuya Nakamura, Susanne Stutte,[...]. Biochem Biophys Res Commun 2020
17
12

Changes in gut microbiota due to supplemented fatty acids in diet-induced obese mice.
Jorge R Mujico, Gyselle C Baccan, Alina Gheorghe, Ligia E Díaz, Ascensión Marcos. Br J Nutr 2013
102
12

Substance P, obesity, and gut inflammation.
Iordanes Karagiannides, Charalabos Pothoulakis. Curr Opin Endocrinol Diabetes Obes 2009
30
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.