A citation-based method for searching scientific literature

Victor G Stepanov, George E Fox. RNA 2021
Times Cited: 3







List of co-cited articles
8 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Decoding the Function of Expansion Segments in Ribosomes.
Kotaro Fujii, Teodorus Theo Susanto, Saumya Saurabh, Maria Barna. Mol Cell 2018
31
66


rRNA expansion segment 27Lb modulates the factor recruitment capacity of the yeast ribosome and shapes the proteome.
Vaishnavi Shankar, Robert Rauscher, Julia Reuther, Walid H Gharib, Miriam Koch, Norbert Polacek. Nucleic Acids Res 2020
5
66

The evolution of the ribosome biogenesis pathway from a yeast perspective.
Ingo Ebersberger, Stefan Simm, Matthias S Leisegang, Peter Schmitzberger, Oliver Mirus, Arndt von Haeseler, Markus T Bohnsack, Enrico Schleiff. Nucleic Acids Res 2014
56
66

One core, two shells: bacterial and eukaryotic ribosomes.
Sergey Melnikov, Adam Ben-Shem, Nicolas Garreau de Loubresse, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Nat Struct Mol Biol 2012
225
66

Supersized Ribosomal RNA Expansion Segments in Asgard Archaea.
Petar I Penev, Sara Fakhretaha-Aval, Vaishnavi J Patel, Jamie J Cannone, Robin R Gutell, Anton S Petrov, Loren Dean Williams, Jennifer B Glass. Genome Biol Evol 2020
6
66

Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
Jean-Paul Armache, Andreas M Anger, Viter Márquez, Sibylle Franckenberg, Thomas Fröhlich, Elizabeth Villa, Otto Berninghausen, Michael Thomm, Georg J Arnold, Roland Beckmann,[...]. Nucleic Acids Res 2013
44
66

History of the ribosome and the origin of translation.
Anton S Petrov, Burak Gulen, Ashlyn M Norris, Nicholas A Kovacs, Chad R Bernier, Kathryn A Lanier, George E Fox, Stephen C Harvey, Roger M Wartell, Nicholas V Hud,[...]. Proc Natl Acad Sci U S A 2015
109
66

Saccharomyces cerevisiae RAI1 (YGL246c) is homologous to human DOM3Z and encodes a protein that binds the nuclear exoribonuclease Rat1p.
Y Xue, X Bai, I Lee, G Kallstrom, J Ho, J Brown, A Stevens, A W Johnson. Mol Cell Biol 2000
90
33

Immature large ribosomal subunits containing the 7S pre-rRNA can engage in translation in Saccharomyces cerevisiae.
Olga Rodríguez-Galán, Juan J García-Gómez, Dieter Kressler, Jesús de la Cruz. RNA Biol 2015
24
33


Cryo-EM structure of an early precursor of large ribosomal subunit reveals a half-assembled intermediate.
Dejian Zhou, Xing Zhu, Sanduo Zheng, Dan Tan, Meng-Qiu Dong, Keqiong Ye. Protein Cell 2019
27
33

Expression of distinct maternal and somatic 5.8S, 18S, and 28S rRNA types during zebrafish development.
Mauro D Locati, Johanna F B Pagano, Geneviève Girard, Wim A Ensink, Marina van Olst, Selina van Leeuwen, Ulrike Nehrdich, Herman P Spaink, Han Rauwerda, Martijs J Jonker,[...]. RNA 2017
40
33

Engineering the ribosomal DNA in a megabase synthetic chromosome.
Weimin Zhang, Guanghou Zhao, Zhouqing Luo, Yicong Lin, Lihui Wang, Yakun Guo, Ann Wang, Shuangying Jiang, Qingwen Jiang, Jianhui Gong,[...]. Science 2017
80
33




A protein interaction map of the LSU processome.
Kathleen L McCann, J Michael Charette, Nicholas G Vincent, Susan J Baserga. Genes Dev 2015
32
33

High-resolution structure of the eukaryotic 80S ribosome.
Gulnara Yusupova, Marat Yusupov. Annu Rev Biochem 2014
78
33


Yeast rRNA Expansion Segments: Folding and Function.
Lizzette M Gómez Ramos, Johanna M Smeekens, Nicholas A Kovacs, Jessica C Bowman, Roger M Wartell, Ronghu Wu, Loren Dean Williams. J Mol Biol 2016
10
33


Structurally distinct, stage-specific ribosomes occur in Plasmodium.
J H Gunderson, M L Sogin, G Wollett, M Hollingdale, V F de la Cruz, A P Waters, T F McCutchan. Science 1987
276
33




Mutational analysis of the structure and localization of the nucleolus in the yeast Saccharomyces cerevisiae.
M Oakes, J P Aris, J S Brockenbrough, H Wai, L Vu, M Nomura. J Cell Biol 1998
101
33

Cryo-EM structures of Arx1 and maturation factors Rei1 and Jjj1 bound to the 60S ribosomal subunit.
Basil J Greber, Daniel Boehringer, Christian Montellese, Nenad Ban. Nat Struct Mol Biol 2012
72
33

Maturation and intranuclear transport of pre-ribosomes requires Noc proteins.
P Milkereit, O Gadal, A Podtelejnikov, S Trumtel, N Gas, E Petfalski, D Tollervey, M Mann, E Hurt, H Tschochner. Cell 2001
153
33


Mutational robustness of 16S ribosomal RNA, shown by experimental horizontal gene transfer in Escherichia coli.
Kei Kitahara, Yoshiaki Yasutake, Kentaro Miyazaki. Proc Natl Acad Sci U S A 2012
25
33


Engineered ribosomes with tethered subunits for expanding biological function.
Erik D Carlson, Anne E d'Aquino, Do Soon Kim, Emily M Fulk, Kim Hoang, Teresa Szal, Alexander S Mankin, Michael C Jewett. Nat Commun 2019
20
33

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.
M S Longtine, A McKenzie, D J Demarini, N G Shah, A Wach, A Brachat, P Philippsen, J R Pringle. Yeast 1998
33

Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Lukas Kater, Matthias Thoms, Clara Barrio-Garcia, Jingdong Cheng, Sherif Ismail, Yasar Luqman Ahmed, Gert Bange, Dieter Kressler, Otto Berninghausen, Irmgard Sinning,[...]. Cell 2017
70
33

Variant ribosomal RNA alleles are conserved and exhibit tissue-specific expression.
Matthew M Parks, Chad M Kurylo, Randall A Dass, Linda Bojmar, David Lyden, C Theresa Vincent, Scott C Blanchard. Sci Adv 2018
83
33

GATK hard filtering: tunable parameters to improve variant calling for next generation sequencing targeted gene panel data.
Simona De Summa, Giovanni Malerba, Rosamaria Pinto, Antonio Mori, Vladan Mijatovic, Stefania Tommasi. BMC Bioinformatics 2017
38
33

Assembly and functionality of the ribosome with tethered subunits.
Nikolay A Aleksashin, Margus Leppik, Adam J Hockenberry, Dorota Klepacki, Nora Vázquez-Laslop, Michael C Jewett, Jaanus Remme, Alexander S Mankin. Nat Commun 2019
16
33

Candida albicans Dicer (CaDcr1) is required for efficient ribosomal and spliceosomal RNA maturation.
Douglas A Bernstein, Valmik K Vyas, David E Weinberg, Ines A Drinnenberg, David P Bartel, Gerald R Fink. Proc Natl Acad Sci U S A 2012
37
33

Protein synthesis by ribosomes with tethered subunits.
Cédric Orelle, Erik D Carlson, Teresa Szal, Tanja Florin, Michael C Jewett, Alexander S Mankin. Nature 2015
116
33

Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes.
Shan Wu, Beril Tutuncuoglu, Kaige Yan, Hailey Brown, Yixiao Zhang, Dan Tan, Michael Gamalinda, Yi Yuan, Zhifei Li, Jelena Jakovljevic,[...]. Nature 2016
112
33

Stepwise assembly of the earliest precursors of large ribosomal subunits in yeast.
Wu Chen, Zhensheng Xie, Fuquan Yang, Keqiong Ye. Nucleic Acids Res 2017
32
33


Coordinated Ribosomal L4 Protein Assembly into the Pre-Ribosome Is Regulated by Its Eukaryote-Specific Extension.
Philipp Stelter, Ferdinand M Huber, Ruth Kunze, Dirk Flemming, André Hoelz, Ed Hurt. Mol Cell 2015
45
33



Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly.
Simon Lebaron, Asa Segerstolpe, Sarah L French, Tatiana Dudnakova, Flavia de Lima Alves, Sander Granneman, Juri Rappsilber, Ann L Beyer, Lars Wieslander, David Tollervey. Mol Cell 2013
41
33

Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum.
Xing-Xing Shen, Dana A Opulente, Jacek Kominek, Xiaofan Zhou, Jacob L Steenwyk, Kelly V Buh, Max A B Haase, Jennifer H Wisecaver, Mingshuang Wang, Drew T Doering,[...]. Cell 2018
153
33

Assembly factors Rpf2 and Rrs1 recruit 5S rRNA and ribosomal proteins rpL5 and rpL11 into nascent ribosomes.
Jingyu Zhang, Piyanun Harnpicharnchai, Jelena Jakovljevic, Lan Tang, Yurong Guo, Marlene Oeffinger, Michael P Rout, Shawna L Hiley, Timothy Hughes, John L Woolford. Genes Dev 2007
138
33



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.