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Cppsite 2.0: An Available Database of Experimentally Validated Cell-Penetrating Peptides Predicting their Secondary and Tertiary Structures.
Kimia Kardani, Azam Bolhassani. J Mol Biol 2021
Times Cited: 10






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List of co-cited articles
48 articles co-cited >1



Times Cited
  Times     Co-cited
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Cell-penetrating peptides: classes, origin, and current landscape.
Francesca Milletti. Drug Discov Today 2012
475
4
40

CPPsite 2.0: a repository of experimentally validated cell-penetrating peptides.
Piyush Agrawal, Sherry Bhalla, Salman Sadullah Usmani, Sandeep Singh, Kumardeep Chaudhary, Gajendra P S Raghava, Ankur Gautam. Nucleic Acids Res 2016
131
4
40

CPPred-RF: A Sequence-based Predictor for Identifying Cell-Penetrating Peptides and Their Uptake Efficiency.
Leyi Wei, PengWei Xing, Ran Su, Gaotao Shi, Zhanshan Sam Ma, Quan Zou. J Proteome Res 2017
80
3
30

In silico approaches for designing highly effective cell penetrating peptides.
Ankur Gautam, Kumardeep Chaudhary, Rahul Kumar, Arun Sharma, Pallavi Kapoor, Atul Tyagi, Gajendra P S Raghava. J Transl Med 2013
145
3
30

Machine-Learning-Based Prediction of Cell-Penetrating Peptides and Their Uptake Efficiency with Improved Accuracy.
Balachandran Manavalan, Sathiyamoorthy Subramaniyam, Tae Hwan Shin, Myeong Ok Kim, Gwang Lee. J Proteome Res 2018
87
3
30

A Web Server and Mobile App for Computing Hemolytic Potency of Peptides.
Kumardeep Chaudhary, Ritesh Kumar, Sandeep Singh, Abhishek Tuknait, Ankur Gautam, Deepika Mathur, Priya Anand, Grish C Varshney, Gajendra P S Raghava. Sci Rep 2016
62
3
30

Internalization mechanisms of cell-penetrating peptides.
Ivana Ruseska, Andreas Zimmer. Beilstein J Nanotechnol 2020
90
3
30

Cell-Penetrating Peptides: Design Strategies beyond Primary Structure and Amphipathicity.
Daniela Kalafatovic, Ernest Giralt. Molecules 2017
110
3
30

Cell-penetrating peptide sequence and modification dependent uptake and subcellular distribution of green florescent protein in different cell lines.
Sanjay G Patel, Edward J Sayers, Lin He, Rohan Narayan, Thomas L Williams, Emily M Mills, Rudolf K Allemann, Louis Y P Luk, Arwyn T Jones, Yu-Hsuan Tsai. Sci Rep 2019
87
3
30

Cell-penetrating peptides: breaking through to the other side.
Erez Koren, Vladimir P Torchilin. Trends Mol Med 2012
443
3
30

Targeting strategies of liposomal subunit vaccine delivery systems to improve vaccine efficacy.
Rui Yu, Yaping Mai, Yue Zhao, Yanhui Hou, Yanhua Liu, Jianhong Yang. J Drug Target 2019
5
2
40

Prediction of cell-penetrating peptides with feature selection techniques.
Hua Tang, Zhen-Dong Su, Huan-Huan Wei, Wei Chen, Hao Lin. Biochem Biophys Res Commun 2016
44
2
20

Nanoparticles as Adjuvants in Vaccine Delivery.
Anuj Garg, Hitesh Kumar Dewangan. Crit Rev Ther Drug Carrier Syst 2020
6
2
33

AllergenFP: allergenicity prediction by descriptor fingerprints.
Ivan Dimitrov, Lyudmila Naneva, Irini Doytchinova, Ivan Bangov. Bioinformatics 2014
188
2
20

AllerTOP v.2--a server for in silico prediction of allergens.
Ivan Dimitrov, Ivan Bangov, Darren R Flower, Irini Doytchinova. J Mol Model 2014
201
2
20

In silico approach for predicting toxicity of peptides and proteins.
Sudheer Gupta, Pallavi Kapoor, Kumardeep Chaudhary, Ankur Gautam, Rahul Kumar, Gajendra P S Raghava. PLoS One 2013
407
2
20

Cell penetrating peptides: the potent multi-cargo intracellular carriers.
Kimia Kardani, Alireza Milani, Samaneh H Shabani, Azam Bolhassani. Expert Opin Drug Deliv 2019
57
2
20

Advanced physical techniques for gene delivery based on membrane perforation.
Xiaofan Du, Jing Wang, Quan Zhou, Luwei Zhang, Sijia Wang, Zhenxi Zhang, Cuiping Yao. Drug Deliv 2018
34
2
20

Mechanisms of cellular uptake of cell-penetrating peptides.
Fatemeh Madani, Staffan Lindberg, Ulo Langel, Shiroh Futaki, Astrid Gräslund. J Biophys 2011
561
2
20

Identification and characterization of novel protein-derived arginine-rich cell-penetrating peptides.
Ankur Gautam, Minakshi Sharma, Pooja Vir, Kumardeep Chaudhary, Pallavi Kapoor, Rahul Kumar, Samir K Nath, Gajendra P S Raghava. Eur J Pharm Biopharm 2015
23
2
20

Recent Advances in Cell Penetrating Peptide-Based Anticancer Therapies.
Justine Habault, Jean-Luc Poyet. Molecules 2019
108
2
20

Properties of MHC class I presented peptides that enhance immunogenicity.
Jorg J A Calis, Matt Maybeno, Jason A Greenbaum, Daniela Weiskopf, Aruna D De Silva, Alessandro Sette, Can Keşmir, Bjoern Peters. PLoS Comput Biol 2013
327
2
20

Fluorophore labeling of a cell-penetrating peptide significantly alters the mode and degree of biomembrane interaction.
Sofie Fogh Hedegaard, Mohammed Sobhi Derbas, Tania Kjellerup Lind, Marina Robertnova Kasimova, Malene Vinther Christensen, Maria Høtoft Michaelsen, Richard A Campbell, Lene Jorgensen, Henrik Franzyk, Marité Cárdenas,[...]. Sci Rep 2018
61
2
20

Cell penetration by transportan.
M Pooga, M Hällbrink, M Zorko, U Langel. FASEB J 1998
455
2
20

Transportan 10 improves the pharmacokinetics and pharmacodynamics of vancomycin.
Jarosław Ruczyński, Izabela Rusiecka, Katarzyna Turecka, Agnieszka Kozłowska, Magdalena Alenowicz, Iwona Gągało, Anna Kawiak, Piotr Rekowski, Krzysztof Waleron, Ivan Kocić. Sci Rep 2019
14
2
20

Transduction peptides: from technology to physiology.
Alain Joliot, Alain Prochiantz. Nat Cell Biol 2004
401
2
20

CPPsite: a curated database of cell penetrating peptides.
Ankur Gautam, Harinder Singh, Atul Tyagi, Kumardeep Chaudhary, Rahul Kumar, Pallavi Kapoor, G P S Raghava. Database (Oxford) 2012
112
2
20

Antifungal activity of Latarcin 1 derived cell-penetrating peptides against Fusarium solani.
Deepthi Poornima Budagavi, Sheeba Zarin, Archana Chugh. Biochim Biophys Acta Biomembr 2018
6
2
33

Structure-activity relationship study of the cell-penetrating peptide pVEC.
Anna Elmquist, Mats Hansen, Ulo Langel. Biochim Biophys Acta 2006
61
2
20

Cyclic Cell-Penetrating Peptides as Efficient Intracellular Drug Delivery Tools.
Shang Eun Park, Muhammad Imran Sajid, Keykavous Parang, Rakesh Kumar Tiwari. Mol Pharm 2019
43
2
20

CPPred-FL: a sequence-based predictor for large-scale identification of cell-penetrating peptides by feature representation learning.
Xiaoli Qiang, Chen Zhou, Xiucai Ye, Pu-Feng Du, Ran Su, Leyi Wei. Brief Bioinform 2018
35
2
20

Cell penetrating peptides: efficient vectors for delivery of nanoparticles, nanocarriers, therapeutic and diagnostic molecules.
Samad Mussa Farkhani, Alireza Valizadeh, Hadi Karami, Samane Mohammadi, Nasrin Sohrabi, Fariba Badrzadeh. Peptides 2014
167
2
20

The third helix of the Antennapedia homeodomain translocates through biological membranes.
D Derossi, A H Joliot, G Chassaing, A Prochiantz. J Biol Chem 1994
1377
2
20

A truncated HIV-1 Tat protein basic domain rapidly translocates through the plasma membrane and accumulates in the cell nucleus.
E Vivès, P Brodin, B Lebleu. J Biol Chem 1997
1767
2
20

Cell-Penetrating Peptides: From Basic Research to Clinics.
Giulia Guidotti, Liliana Brambilla, Daniela Rossi. Trends Pharmacol Sci 2017
468
2
20

Ab initio design of potent anti-MRSA peptides based on database filtering technology.
Biswajit Mishra, Guangshun Wang. J Am Chem Soc 2012
85
2
20

The antimicrobial peptides and their potential clinical applications.
Jun Lei, Lichun Sun, Siyu Huang, Chenhong Zhu, Ping Li, Jun He, Vienna Mackey, David H Coy, Quanyong He. Am J Transl Res 2019
250
2
20

Nanosystems as Vehicles for the Delivery of Antimicrobial Peptides (AMPs).
Ángela Martin-Serrano, Rafael Gómez, Paula Ortega, F Javier de la Mata. Pharmaceutics 2019
46
2
20

Prediction of Cell-Penetrating Potential of Modified Peptides Containing Natural and Chemically Modified Residues.
Vinod Kumar, Piyush Agrawal, Rajesh Kumar, Sherry Bhalla, Salman Sadullah Usmani, Grish C Varshney, Gajendra P S Raghava. Front Microbiol 2018
29
2
20

Membrane Active Peptides and Their Biophysical Characterization.
Fatma Gizem Avci, Berna Sariyar Akbulut, Elif Ozkirimli. Biomolecules 2018
69
2
20

Cellular uptake of the tat protein from human immunodeficiency virus.
A D Frankel, C O Pabo. Cell 1988
2084
2
20

Autonomous functional domains of chemically synthesized human immunodeficiency virus tat trans-activator protein.
M Green, P M Loewenstein. Cell 1988
1088
2
20

Antimicrobial Peptides: Classification, Design, Application and Research Progress in Multiple Fields.
Yuchen Huan, Qing Kong, Haijin Mou, Huaxi Yi. Front Microbiol 2020
108
2
20

Combination of Cell-Penetrating Peptides with Nanoparticles for Therapeutic Application: A Review.
Sara Silva, António J Almeida, Nuno Vale. Biomolecules 2019
72
2
20

Predicting cell-penetrating peptides using machine learning algorithms and navigating in their chemical space.
Ewerton Cristhian Lima de Oliveira, Kauê Santana, Luiz Josino, Anderson Henrique Lima E Lima, Claudomiro de Souza de Sales Júnior. Sci Rep 2021
5
2
40

Uptake Mechanism of Cell-Penetrating Peptides.
Maxime Gestin, Moataz Dowaidar, Ülo Langel. Adv Exp Med Biol 2017
40
2
20

Getting across the cell membrane: an overview for small molecules, peptides, and proteins.
Nicole J Yang, Marlon J Hinner. Methods Mol Biol 2015
271
2
20

Cell Penetrating Peptides, Novel Vectors for Gene Therapy.
Rebecca E Taylor, Maliha Zahid. Pharmaceutics 2020
47
2
20

Applications of genome editing technology in the targeted therapy of human diseases: mechanisms, advances and prospects.
Hongyi Li, Yang Yang, Weiqi Hong, Mengyuan Huang, Min Wu, Xia Zhao. Signal Transduct Target Ther 2020
273
1
10

Prediction and analysis of cell-penetrating peptides using pseudo-amino acid composition and random forest models.
Lei Chen, Chen Chu, Tao Huang, Xiangyin Kong, Yu-Dong Cai. Amino Acids 2015
52
1
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.

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