A citation-based method for searching scientific literature

Phil Ruis, David Van Ly, Valerie Borel, Georgia R Kafer, Afshan McCarthy, Steven Howell, Robert Blassberg, Ambrosius P Snijders, James Briscoe, Kathy K Niakan, Paulina Marzec, Anthony J Cesare, Simon J Boulton. Nature 2021
Times Cited: 6







List of co-cited articles
79 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


TRF2-mediated telomere protection is dispensable in pluripotent stem cells.
Marta Markiewicz-Potoczny, Anastasia Lobanova, Anisha M Loeb, Oktay Kirak, Teresa Olbrich, Sergio Ruiz, Eros Lazzerini Denchi. Nature 2021
7
100

Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication.
Agnel Sfeir, Settapong T Kosiyatrakul, Dirk Hockemeyer, Sheila L MacRae, Jan Karlseder, Carl L Schildkraut, Titia de Lange. Cell 2009
636
66


Telomeres acquire embryonic stem cell characteristics in induced pluripotent stem cells.
Rosa M Marion, Katerina Strati, Han Li, Agueda Tejera, Stefan Schoeftner, Sagrario Ortega, Manuel Serrano, Maria A Blasco. Cell Stem Cell 2009
334
50


A two-step mechanism for TRF2-mediated chromosome-end protection.
Keiji Okamoto, Cristina Bartocci, Iliana Ouzounov, Jolene K Diedrich, John R Yates, Eros Lazzerini Denchi. Nature 2013
137
50


Shelterin-Mediated Telomere Protection.
Titia de Lange. Annu Rev Genet 2018
206
50

Super-resolution fluorescence imaging of telomeres reveals TRF2-dependent T-loop formation.
Ylli Doksani, John Y Wu, Titia de Lange, Xiaowei Zhuang. Cell 2013
260
50

The N-terminal domains of TRF1 and TRF2 regulate their ability to condense telomeric DNA.
Anaïs Poulet, Sabrina Pisano, Cendrine Faivre-Moskalenko, Bei Pei, Yannick Tauran, Zofia Haftek-Terreau, Frédéric Brunet, Yann-Vaï Le Bihan, Marie-Hélène Ledu, Fabien Montel,[...]. Nucleic Acids Res 2012
46
33

Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells.
Eran Meshorer, Dhananjay Yellajoshula, Eric George, Peter J Scambler, David T Brown, Tom Misteli. Dev Cell 2006
726
33

53BP1: a DSB escort.
Zachary Mirman, Titia de Lange. Genes Dev 2020
44
33

RNF168 binds and amplifies ubiquitin conjugates on damaged chromosomes to allow accumulation of repair proteins.
Carsten Doil, Niels Mailand, Simon Bekker-Jensen, Patrice Menard, Dorthe Helena Larsen, Rainer Pepperkok, Jan Ellenberg, Stephanie Panier, Daniel Durocher, Jiri Bartek,[...]. Cell 2009
631
33

The POT1-TPP1 telomere complex is a telomerase processivity factor.
Feng Wang, Elaine R Podell, Arthur J Zaug, Yuting Yang, Paul Baciu, Thomas R Cech, Ming Lei. Nature 2007
456
33

Human RAP1 inhibits non-homologous end joining at telomeres.
Jay Sarthy, Nancy S Bae, Jonathan Scrafford, Peter Baumann. EMBO J 2009
86
33

Structural and functional analyses of the mammalian TIN2-TPP1-TRF2 telomeric complex.
Chunyi Hu, Rekha Rai, Chenhui Huang, Cayla Broton, Juanjuan Long, Ying Xu, Jing Xue, Ming Lei, Sandy Chang, Yong Chen. Cell Res 2017
38
33


Homologous recombination generates T-loop-sized deletions at human telomeres.
Richard C Wang, Agata Smogorzewska, Titia de Lange. Cell 2004
396
33

TRF2-Mediated Control of Telomere DNA Topology as a Mechanism for Chromosome-End Protection.
Delphine Benarroch-Popivker, Sabrina Pisano, Aaron Mendez-Bermudez, Liudmyla Lototska, Parminder Kaur, Serge Bauwens, Nadir Djerbi, Chrysa M Latrick, Vincent Fraisier, Bei Pei,[...]. Mol Cell 2016
79
33

ATRX interacts with H3.3 in maintaining telomere structural integrity in pluripotent embryonic stem cells.
Lee H Wong, James D McGhie, Marcus Sim, Melissa A Anderson, Soyeon Ahn, Ross D Hannan, Amee J George, Kylie A Morgan, Jeffrey R Mann, K H Andy Choo. Genome Res 2010
258
33

TRF2 and apollo cooperate with topoisomerase 2alpha to protect human telomeres from replicative damage.
Jing Ye, Christelle Lenain, Serge Bauwens, Angela Rizzo, Adelaïde Saint-Léger, Anaïs Poulet, Delphine Benarroch, Frédérique Magdinier, Julia Morere, Simon Amiard,[...]. Cell 2010
124
33

Loss of Rap1 induces telomere recombination in the absence of NHEJ or a DNA damage signal.
Agnel Sfeir, Shaheen Kabir, Megan van Overbeek, Giulia B Celli, Titia de Lange. Science 2010
173
33

53BP1 promotes non-homologous end joining of telomeres by increasing chromatin mobility.
Nadya Dimitrova, Yi-Chun M Chen, David L Spector, Titia de Lange. Nature 2008
400
33

Histone H3.3 incorporation provides a unique and functionally essential telomeric chromatin in embryonic stem cells.
Lee H Wong, Hua Ren, Evan Williams, James McGhie, Soyeon Ahn, Marcus Sim, Angela Tam, Elizabeth Earle, Melissa A Anderson, Jeffrey Mann,[...]. Genome Res 2009
112
33

Telomere-independent Rap1 is an IKK adaptor and regulates NF-kappaB-dependent gene expression.
Hsiangling Teo, Sourav Ghosh, Hendrik Luesch, Arkasubhra Ghosh, Ee Tsin Wong, Najib Malik, Anthony Orth, Paul de Jesus, Anthony S Perry, Jeffrey D Oliver,[...]. Nat Cell Biol 2010
125
33

Telomere Loop Dynamics in Chromosome End Protection.
David Van Ly, Ronnie Ren Jie Low, Sonja Frölich, Tara K Bartolec, Georgia R Kafer, Hilda A Pickett, Katharina Gaus, Anthony J Cesare. Mol Cell 2018
42
33



RAP1 protects from obesity through its extratelomeric role regulating gene expression.
Paula Martínez, Gonzalo Gómez-López, Fernando García, Evi Mercken, Sarah Mitchell, Juana M Flores, Rafael de Cabo, Maria A Blasco. Cell Rep 2013
71
33

The telomeric protein TRF2 binds the ATM kinase and can inhibit the ATM-dependent DNA damage response.
Jan Karlseder, Kristina Hoke, Olga K Mirzoeva, Christopher Bakkenist, Michael B Kastan, John H J Petrini, Titia de Lange. PLoS Biol 2004
263
33

The basic domain of TRF2 directs binding to DNA junctions irrespective of the presence of TTAGGG repeats.
Nicole Fouché, Anthony J Cesare, Smaranda Willcox, Sezgin Ozgür, Sarah A Compton, Jack D Griffith. J Biol Chem 2006
72
33

RNF8 transduces the DNA-damage signal via histone ubiquitylation and checkpoint protein assembly.
Michael S Y Huen, Robert Grant, Isaac Manke, Kay Minn, Xiaochun Yu, Michael B Yaffe, Junjie Chen. Cell 2007
758
33

DNA damage foci at dysfunctional telomeres.
Hiroyuki Takai, Agata Smogorzewska, Titia de Lange. Curr Biol 2003
963
33

A DNA damage checkpoint response in telomere-initiated senescence.
Fabrizio d'Adda di Fagagna, Philip M Reaper, Lorena Clay-Farrace, Heike Fiegler, Philippa Carr, Thomas Von Zglinicki, Gabriele Saretzki, Nigel P Carter, Stephen P Jackson. Nature 2003
33

Chromatin in pluripotent embryonic stem cells and differentiation.
Eran Meshorer, Tom Misteli. Nat Rev Mol Cell Biol 2006
492
33

SNMIB/Apollo protects leading-strand telomeres against NHEJ-mediated repair.
Yung C Lam, Shamima Akhter, Peili Gu, Jing Ye, Anaïs Poulet, Marie-Josèphe Giraud-Panis, Susan M Bailey, Eric Gilson, Randy J Legerski, Sandy Chang. EMBO J 2010
81
33


TRF2 protects human telomeres from end-to-end fusions.
B van Steensel, A Smogorzewska, T de Lange. Cell 1998
33

Targeted deletion reveals an essential function for the telomere length regulator Trf1.
Jan Karlseder, Leili Kachatrian, Hiroyuki Takai, Kim Mercer, Sunil Hingorani, Tyler Jacks, Titia de Lange. Mol Cell Biol 2003
126
33

p53- and ATM-dependent apoptosis induced by telomeres lacking TRF2.
J Karlseder, D Broccoli, Y Dai, S Hardy, T de Lange. Science 1999
837
33

Telomere protection by TPP1/POT1 requires tethering to TIN2.
Kaori K Takai, Tatsuya Kibe, Jill R Donigian, David Frescas, Titia de Lange. Mol Cell 2011
137
33

A critical role for TPP1 and TIN2 interaction in high-order telomeric complex assembly.
Matthew S O'Connor, Amin Safari, Huawei Xin, Dan Liu, Zhou Songyang. Proc Natl Acad Sci U S A 2006
165
33

Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells.
Bo Wen, Hao Wu, Yoichi Shinkai, Rafael A Irizarry, Andrew P Feinberg. Nat Genet 2009
395
33

TRF1 averts chromatin remodelling, recombination and replication dependent-break induced replication at mouse telomeres.
Rosa Maria Porreca, Emilia Herrera-Moyano, Eleni Skourti, Pui Pik Law, Roser Gonzalez Franco, Alex Montoya, Peter Faull, Holger Kramer, Jean-Baptiste Vannier. Elife 2020
8
33

TRF2 binds branched DNA to safeguard telomere integrity.
Isabelle Schmutz, Leonid Timashev, Wei Xie, Dinshaw J Patel, Titia de Lange. Nat Struct Mol Biol 2017
36
33

A topological mechanism for TRF2-enhanced strand invasion.
Simon Amiard, Michel Doudeau, Sébastien Pinte, Anaïs Poulet, Christelle Lenain, Cendrine Faivre-Moskalenko, Dimitar Angelov, Nele Hug, Alessandro Vindigni, Philippe Bouvet,[...]. Nat Struct Mol Biol 2007
133
33

Mammalian telomeres end in a large duplex loop.
J D Griffith, L Comeau, S Rosenfield, R M Stansel, A Bianchi, H Moss, T de Lange. Cell 1999
33

Systematic analysis of human telomeric dysfunction using inducible telosome/shelterin CRISPR/Cas9 knockout cells.
Hyeung Kim, Feng Li, Quanyuan He, Tingting Deng, Jun Xu, Feng Jin, Cristian Coarfa, Nagireddy Putluri, Dan Liu, Zhou Songyang. Cell Discov 2017
28
33

Human telomeres contain two distinct Myb-related proteins, TRF1 and TRF2.
D Broccoli, A Smogorzewska, L Chong, T de Lange. Nat Genet 1997
710
33

The basic N-terminal domain of TRF2 limits recombination endonuclease action at human telomeres.
Adélaïde Saint-Léger, Melanie Koelblen, Livia Civitelli, Amadou Bah, Nadir Djerbi, Marie-Josèphe Giraud-Panis, Arturo Londoño-Vallejo, Fiorentina Ascenzioni, Eric Gilson. Cell Cycle 2014
36
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.