A citation-based method for searching scientific literature

Marta Markiewicz-Potoczny, Anastasia Lobanova, Anisha M Loeb, Oktay Kirak, Teresa Olbrich, Sergio Ruiz, Eros Lazzerini Denchi. Nature 2021
Times Cited: 7







List of co-cited articles
83 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


TRF2-independent chromosome end protection during pluripotency.
Phil Ruis, David Van Ly, Valerie Borel, Georgia R Kafer, Afshan McCarthy, Steven Howell, Robert Blassberg, Ambrosius P Snijders, James Briscoe, Kathy K Niakan,[...]. Nature 2021
6
100

Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication.
Agnel Sfeir, Settapong T Kosiyatrakul, Dirk Hockemeyer, Sheila L MacRae, Jan Karlseder, Carl L Schildkraut, Titia de Lange. Cell 2009
636
57


Telomeres acquire embryonic stem cell characteristics in induced pluripotent stem cells.
Rosa M Marion, Katerina Strati, Han Li, Agueda Tejera, Stefan Schoeftner, Sagrario Ortega, Manuel Serrano, Maria A Blasco. Cell Stem Cell 2009
334
42


A two-step mechanism for TRF2-mediated chromosome-end protection.
Keiji Okamoto, Cristina Bartocci, Iliana Ouzounov, Jolene K Diedrich, John R Yates, Eros Lazzerini Denchi. Nature 2013
137
42


Shelterin-Mediated Telomere Protection.
Titia de Lange. Annu Rev Genet 2018
206
42

Super-resolution fluorescence imaging of telomeres reveals TRF2-dependent T-loop formation.
Ylli Doksani, John Y Wu, Titia de Lange, Xiaowei Zhuang. Cell 2013
260
42

Conservation and innovation in the DUX4-family gene network.
Jennifer L Whiddon, Ashlee T Langford, Chao-Jen Wong, Jun Wen Zhong, Stephen J Tapscott. Nat Genet 2017
119
42

DUX-family transcription factors regulate zygotic genome activation in placental mammals.
Alberto De Iaco, Evarist Planet, Andrea Coluccio, Sonia Verp, Julien Duc, Didier Trono. Nat Genet 2017
190
42

Zscan4 regulates telomere elongation and genomic stability in ES cells.
Michal Zalzman, Geppino Falco, Lioudmila V Sharova, Akira Nishiyama, Marshall Thomas, Sung-Lim Lee, Carole A Stagg, Hien G Hoang, Hsih-Te Yang, Fred E Indig,[...]. Nature 2010
239
42

Embryonic stem cell potency fluctuates with endogenous retrovirus activity.
Todd S Macfarlan, Wesley D Gifford, Shawn Driscoll, Karen Lettieri, Helen M Rowe, Dario Bonanomi, Amy Firth, Oded Singer, Didier Trono, Samuel L Pfaff. Nature 2012
524
42

Conserved roles of mouse DUX and human DUX4 in activating cleavage-stage genes and MERVL/HERVL retrotransposons.
Peter G Hendrickson, Jessie A Doráis, Edward J Grow, Jennifer L Whiddon, Jong-Won Lim, Candice L Wike, Bradley D Weaver, Christian Pflueger, Benjamin R Emery, Aaron L Wilcox,[...]. Nat Genet 2017
222
42

The N-terminal domains of TRF1 and TRF2 regulate their ability to condense telomeric DNA.
Anaïs Poulet, Sabrina Pisano, Cendrine Faivre-Moskalenko, Bei Pei, Yannick Tauran, Zofia Haftek-Terreau, Frédéric Brunet, Yann-Vaï Le Bihan, Marie-Hélène Ledu, Fabien Montel,[...]. Nucleic Acids Res 2012
46
28

Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells.
Eran Meshorer, Dhananjay Yellajoshula, Eric George, Peter J Scambler, David T Brown, Tom Misteli. Dev Cell 2006
726
28

53BP1: a DSB escort.
Zachary Mirman, Titia de Lange. Genes Dev 2020
44
28

RNF168 binds and amplifies ubiquitin conjugates on damaged chromosomes to allow accumulation of repair proteins.
Carsten Doil, Niels Mailand, Simon Bekker-Jensen, Patrice Menard, Dorthe Helena Larsen, Rainer Pepperkok, Jan Ellenberg, Stephanie Panier, Daniel Durocher, Jiri Bartek,[...]. Cell 2009
631
28

The POT1-TPP1 telomere complex is a telomerase processivity factor.
Feng Wang, Elaine R Podell, Arthur J Zaug, Yuting Yang, Paul Baciu, Thomas R Cech, Ming Lei. Nature 2007
456
28

Human RAP1 inhibits non-homologous end joining at telomeres.
Jay Sarthy, Nancy S Bae, Jonathan Scrafford, Peter Baumann. EMBO J 2009
86
28

Structural and functional analyses of the mammalian TIN2-TPP1-TRF2 telomeric complex.
Chunyi Hu, Rekha Rai, Chenhui Huang, Cayla Broton, Juanjuan Long, Ying Xu, Jing Xue, Ming Lei, Sandy Chang, Yong Chen. Cell Res 2017
38
28


Homologous recombination generates T-loop-sized deletions at human telomeres.
Richard C Wang, Agata Smogorzewska, Titia de Lange. Cell 2004
396
28

TRF2-Mediated Control of Telomere DNA Topology as a Mechanism for Chromosome-End Protection.
Delphine Benarroch-Popivker, Sabrina Pisano, Aaron Mendez-Bermudez, Liudmyla Lototska, Parminder Kaur, Serge Bauwens, Nadir Djerbi, Chrysa M Latrick, Vincent Fraisier, Bei Pei,[...]. Mol Cell 2016
79
28

ATRX interacts with H3.3 in maintaining telomere structural integrity in pluripotent embryonic stem cells.
Lee H Wong, James D McGhie, Marcus Sim, Melissa A Anderson, Soyeon Ahn, Ross D Hannan, Amee J George, Kylie A Morgan, Jeffrey R Mann, K H Andy Choo. Genome Res 2010
258
28

TRF2 and apollo cooperate with topoisomerase 2alpha to protect human telomeres from replicative damage.
Jing Ye, Christelle Lenain, Serge Bauwens, Angela Rizzo, Adelaïde Saint-Léger, Anaïs Poulet, Delphine Benarroch, Frédérique Magdinier, Julia Morere, Simon Amiard,[...]. Cell 2010
124
28

Loss of Rap1 induces telomere recombination in the absence of NHEJ or a DNA damage signal.
Agnel Sfeir, Shaheen Kabir, Megan van Overbeek, Giulia B Celli, Titia de Lange. Science 2010
173
28

53BP1 promotes non-homologous end joining of telomeres by increasing chromatin mobility.
Nadya Dimitrova, Yi-Chun M Chen, David L Spector, Titia de Lange. Nature 2008
400
28

Histone H3.3 incorporation provides a unique and functionally essential telomeric chromatin in embryonic stem cells.
Lee H Wong, Hua Ren, Evan Williams, James McGhie, Soyeon Ahn, Marcus Sim, Angela Tam, Elizabeth Earle, Melissa A Anderson, Jeffrey Mann,[...]. Genome Res 2009
112
28

Telomere-independent Rap1 is an IKK adaptor and regulates NF-kappaB-dependent gene expression.
Hsiangling Teo, Sourav Ghosh, Hendrik Luesch, Arkasubhra Ghosh, Ee Tsin Wong, Najib Malik, Anthony Orth, Paul de Jesus, Anthony S Perry, Jeffrey D Oliver,[...]. Nat Cell Biol 2010
125
28

Telomere Loop Dynamics in Chromosome End Protection.
David Van Ly, Ronnie Ren Jie Low, Sonja Frölich, Tara K Bartolec, Georgia R Kafer, Hilda A Pickett, Katharina Gaus, Anthony J Cesare. Mol Cell 2018
42
28



RAP1 protects from obesity through its extratelomeric role regulating gene expression.
Paula Martínez, Gonzalo Gómez-López, Fernando García, Evi Mercken, Sarah Mitchell, Juana M Flores, Rafael de Cabo, Maria A Blasco. Cell Rep 2013
71
28

The telomeric protein TRF2 binds the ATM kinase and can inhibit the ATM-dependent DNA damage response.
Jan Karlseder, Kristina Hoke, Olga K Mirzoeva, Christopher Bakkenist, Michael B Kastan, John H J Petrini, Titia de Lange. PLoS Biol 2004
263
28

The basic domain of TRF2 directs binding to DNA junctions irrespective of the presence of TTAGGG repeats.
Nicole Fouché, Anthony J Cesare, Smaranda Willcox, Sezgin Ozgür, Sarah A Compton, Jack D Griffith. J Biol Chem 2006
72
28

RNF8 transduces the DNA-damage signal via histone ubiquitylation and checkpoint protein assembly.
Michael S Y Huen, Robert Grant, Isaac Manke, Kay Minn, Xiaochun Yu, Michael B Yaffe, Junjie Chen. Cell 2007
758
28

DNA damage foci at dysfunctional telomeres.
Hiroyuki Takai, Agata Smogorzewska, Titia de Lange. Curr Biol 2003
963
28

A DNA damage checkpoint response in telomere-initiated senescence.
Fabrizio d'Adda di Fagagna, Philip M Reaper, Lorena Clay-Farrace, Heike Fiegler, Philippa Carr, Thomas Von Zglinicki, Gabriele Saretzki, Nigel P Carter, Stephen P Jackson. Nature 2003
28

Chromatin in pluripotent embryonic stem cells and differentiation.
Eran Meshorer, Tom Misteli. Nat Rev Mol Cell Biol 2006
492
28

SNMIB/Apollo protects leading-strand telomeres against NHEJ-mediated repair.
Yung C Lam, Shamima Akhter, Peili Gu, Jing Ye, Anaïs Poulet, Marie-Josèphe Giraud-Panis, Susan M Bailey, Eric Gilson, Randy J Legerski, Sandy Chang. EMBO J 2010
81
28


TRF2 protects human telomeres from end-to-end fusions.
B van Steensel, A Smogorzewska, T de Lange. Cell 1998
28

Targeted deletion reveals an essential function for the telomere length regulator Trf1.
Jan Karlseder, Leili Kachatrian, Hiroyuki Takai, Kim Mercer, Sunil Hingorani, Tyler Jacks, Titia de Lange. Mol Cell Biol 2003
126
28

p53- and ATM-dependent apoptosis induced by telomeres lacking TRF2.
J Karlseder, D Broccoli, Y Dai, S Hardy, T de Lange. Science 1999
837
28

Telomere protection by TPP1/POT1 requires tethering to TIN2.
Kaori K Takai, Tatsuya Kibe, Jill R Donigian, David Frescas, Titia de Lange. Mol Cell 2011
137
28

A critical role for TPP1 and TIN2 interaction in high-order telomeric complex assembly.
Matthew S O'Connor, Amin Safari, Huawei Xin, Dan Liu, Zhou Songyang. Proc Natl Acad Sci U S A 2006
165
28

Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells.
Bo Wen, Hao Wu, Yoichi Shinkai, Rafael A Irizarry, Andrew P Feinberg. Nat Genet 2009
395
28

TRF1 averts chromatin remodelling, recombination and replication dependent-break induced replication at mouse telomeres.
Rosa Maria Porreca, Emilia Herrera-Moyano, Eleni Skourti, Pui Pik Law, Roser Gonzalez Franco, Alex Montoya, Peter Faull, Holger Kramer, Jean-Baptiste Vannier. Elife 2020
8
28

TRF2 binds branched DNA to safeguard telomere integrity.
Isabelle Schmutz, Leonid Timashev, Wei Xie, Dinshaw J Patel, Titia de Lange. Nat Struct Mol Biol 2017
36
28


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.